Cynara cardunculus var. scolymus (artichoke): 112523227
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Entry
112523227 CDS
T05604
Name
(RefSeq) phospholipase A I isoform X1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patatin
LRR_4
Arm
LRR_8
HEAT_2
PUL
Motif
Other DBs
NCBI-GeneID:
112523227
NCBI-ProteinID:
XP_024988516
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Position
LG 12:complement(6099590..6112998)
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AA seq
1362 aa
AA seq
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MSWGLGWKRPSDVFHLSLYYGTEEALDDQTRSSSPSPESSSGSSSAAVASRDDNNNSNNS
NCSNPELGFRIDLDWNAGDDEDQVTLKLQSQVMVALPLPQDTVVIRLSECDDSGRVGTGE
EVGESGRVGDVNVVGVEMKVVKQREPLRAVAMSRVGGSGQQNDGMGVLTKLLKSEFAAEP
GPGHAEGPRAESCADHWMNVTVVSLYNCGLSMLPVELTKLPLLEKLFLDNNKLTLLPPEL
GVLKNLKVLTVDYNMLVSVPVELRQCVGLVELSLEHNKLIRPLLDFRAMAELRILRLFGN
PLEFLPDILPLHQLRHLSLANIRIVADDYLRSVNVQIEMENSSYFVASRHKLSAFFSLIF
RFSSCHHPLIASALAKMMQDEGNRVVIGKDENAVRQLISMISSEDQHVVVEACSALTSLA
SDVSVALQLMKCDIMQPIKRVLTSIGPQELKSVLQVVAKLGFISDTVAQKMLSKDVMKSL
KLLCAHKDPEVQRLALIAVGNLAFCLENRRVLVASESLRDLLLRLTLSSEQRVSKAAARV
LAILGENENLRRAIKGRQVPKQGLRILAMDGGGMKGLATVQILKEIENGTGKQIHEMFDL
ICGTSTGGMLAVALGIKLMSLEQCEDIYKNLGKLVFAEPVPKDNEAATWREKLDQLYKSS
SQSFRVVVHGSKHSADQFERLLKEMCADEDGDLLIDSSVKRIPKVFVVSTLVNVAPAQPF
IFRNYQYPAGTPEVPLIMSENFSTNGPGIATTGAQVGYKRSAYMGSCRHDLWQAIRASSA
APYYLDDYSDGVLRWQDGAIVANNPTIFAIREAQLLWPDAKIDTLVSIGCCSLPTKARKG
GWRYLDTGQVLIESACSVERVEEALSTLLPMIPEIHYFRFNPVDERCDMELDETDPTIWI
KLEAATNEYIQNNSPTFKKLCERLLLNHTDEKLPENINSKQLFKAKGPNSGEDGPSLGWR
RNVLLVEASHNPDSGRVFNHARSLQTFCSGHGIRLSLLNAASGTLKQEPGTSFPTPFTSP
LFTGSFPSSPLLYSPDLGVHRVGRIESVPHLSLDGFHSGRTSSPPESPTVPRQLSMPVRV
LLDKLQNSPQVGVVHLALQNDTTGSILSWQNDVFVVAEPGELAEKFLQSVKYSLLSMLRG
RRRRYTSIISNISSVADLVACRPYFQIGGVVHRYIGRQTQVMEDDQEIGAYMFRRTVPSM
HLTPEDVRWMVGAWRDRIIICTCLYGPSPALIKAFLDSGAKAVICPSSEPQEMQLTTFHG
STEFNDTENSKFVIGVDEADEESSEPTSPASDWEDSETDKGTTTGTDKGMLVWDDDEEEL
SRFICRLYDSIFMGGARVNVALQQALGSHRTIRYSCHLPRVP
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggggattaggatggaagaggccatctgatgtttttcatttgtctctatattat
ggtacggaggaggcattagatgatcagactcgttcatcttcgccgtcaccagaatcgtca
tcaggatcgtcgtcggcggcggtggcatcgcgagatgataataataatagtaataatagt
aattgcagcaatccggagctagggtttcggatcgatctcgattggaatgctggcgatgac
gaagatcaggttactttgaagcttcagtctcaggttatggtggcgttgccgttgcctcaa
gacacggttgtgattcggttgtcggagtgtgatgactcgggtcgtgttggaaccggtgag
gaggttggtgagtcgggtcgtgttggggatgtaaatgtggtgggtgtggagatgaaggtt
gtgaagcagagggagccactcagggcggtggctatgtcacgggtcggggggtcgggtcag
cagaatgatgggatgggtgtgcttactaagctgttgaaatcggagtttgctgctgagcct
ggtccaggtcatgccgaggggccgcgggctgagtcctgcgccgatcattggatgaatgtc
actgttgtcagcctctataactgtgggttatcaatgcttccagtagagttgactaaactg
ccactcctcgagaagctattccttgataacaataagctaacgcttttgccacctgagctt
ggtgttttaaaaaacctgaaagtgctcacagttgactacaatatgttggtttcagtacca
gttgaactgaggcagtgtgttggacttgtggaattatcacttgaacataataagctaatt
cgccctcttcttgatttcagggccatggccgaattacgtattcttaggctatttggtaat
ccactggaatttcttcctgatattttgcctttgcatcaactccgccacctttctcttgca
aacattcgcattgtggcagatgactatcttagatcagtgaatgttcagatagagatggaa
aatagttcttactttgtcgcatcacgacacaagctgagtgcatttttctctctaatattt
cgcttctcctcatgtcaccatcctttgatagcatcagcattggcaaagatgatgcaggat
gaaggaaaccgtgtagttattggtaaagatgaaaatgcagtgcgacagctcataagcatg
ataagtagtgaagaccagcatgtggttgtggaggcttgttctgcacttacttctcttgcc
tcagatgtatctgtggcacttcagttgatgaaatgtgacatcatgcaacccatcaaaaga
gtacttacatctattggccctcaagaactaaaatccgttttgcaagtcgtggccaagttg
ggtttcatctctgatacagtggcccagaaaatgcttagcaaggatgtgatgaaatcatta
aagttattatgtgctcataaagatccagaggtacaaaggttagctttaatagctgtcgga
aacttagccttctgtttggagaatcgccgcgttcttgttgcttctgaaagcctaagagat
cttctcttgcggcttacactttcatctgagcaacgcgtgagcaaagctgcagctcgtgtc
ctggcaattcttggggagaatgagaatctgcgacgtgctatcaaaggaaggcaggtcccg
aagcaaggattgcggatacttgcaatggatggaggtgggatgaaaggtcttgctactgtt
cagattcttaaagaaattgaaaatggtactgggaaacagatacatgagatgtttgacctt
atatgtggcacatcaactggtggcatgcttgccgttgctcttggaataaagttaatgtcc
ttggaacaatgtgaagacatatacaaaaatcttggcaagcttgtttttgccgaacctgtt
cctaaggataatgaagcagcaacttggagagagaagttagatcaactttacaagagctca
tcacaaagttttagagttgttgtacatggatctaaacacagtgctgatcagttcgagagg
ttgttgaaagagatgtgtgctgatgaggatggagatctgttgatagattcatcagtgaaa
aggattcccaaagtttttgtggtatcaactttagtcaatgtggcaccagcacagccattt
atatttcgcaattatcagtaccctgctggcacaccagaagttcctttgattatgtcagaa
aatttttcaaccaatggaccaggaatcgcaactactggtgctcaagttggatacaaacgt
agcgcttatatgggaagttgtagacatgatctgtggcaagctataagagcatcatctgca
gctccatattatcttgatgattactctgatggtgtattacgctggcaagatggtgctatt
gttgcaaataatcctactatatttgcaatacgagaagcacagcttctatggccagatgca
aaaattgacactctggtttcaattggttgttgttctcttccaacaaaggctcgtaaaggt
ggatggcgctatttggacactggccaggtgttgatcgagagtgcctgctcagttgagcgg
gttgaggaggcattgagcacattgttaccaatgattcctgaaatacactattttcggttc
aatccagttgatgaacgctgtgatatggagttggatgaaactgatcccacaatctggatt
aagttagaggcagcaacgaatgaatatatccagaacaattctcccacgtttaaaaagttg
tgtgagagattgttgctgaaccatactgatgaaaagttgccagaaaatatcaactctaaa
cagcttttcaaggcaaaaggtccaaattctggtgaagatggtccgtccttaggctggaga
cgtaacgtgctactcgtcgaagcttctcacaacccagattctggacgagtttttaaccat
gctcggtcacttcaaacgttttgttctggtcacggtataagattatctcttctgaatgct
gcatcaggaacacttaagcaagaaccgggaacatcttttcccacacccttcacatcacca
ttattcaccggaagctttccgtcaagcccgcttctctatagtcctgatcttggagttcat
agggttggcaggattgaatcagtaccacatttaagtctggatggattccattctggaaga
acttcttctccgccagaatcaccaacagttcctagacagctttctatgcctgttcgagta
ttgctcgataagttacagaattcaccacaggttggagttgttcacttggctctccaaaat
gatacaactggctcaatattaagttggcaaaacgacgtatttgtggttgcggaaccagga
gaacttgccgagaagtttttgcagagcgttaaatacagtttgctatcaatgttgagaggc
cgacgcaggagatacacatcaataatttccaacatatctagtgttgctgatttggttgcc
tgtcggccttactttcagattggcggtgttgtacatcgttacatcggacgccaaacccaa
gtcatggaagacgatcaagaaataggggcgtacatgttccgcaggacagtcccttctatg
cacttaactcctgaagatgttcgttggatggttggtgcttggagggataggatcataata
tgcacatgtttatacggtccttcacccgctctaataaaggccttcctagactccggtgct
aaagctgtcatatgcccatcatctgaaccccaagaaatgcagttgaccacattccacggg
tccaccgagttcaacgataccgagaacagcaagtttgtaatcggcgtagacgaagccgat
gaagaatcttccgagcccaccagcccagccagcgattgggaagacagcgagaccgataag
ggcaccaccacgggtacggataaaggaatgctcgtttgggacgacgatgaagaggagctc
tccagattcatctgtcgcctctacgattcgatatttatgggaggagctcgagttaatgtt
gcgttacaacaagcacttggctctcatcgaacgataaggtattcttgtcacttacctcgt
gtaccgtaa
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