Cynara cardunculus var. scolymus (artichoke): 112524424
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Entry
112524424 CDS
T05604
Name
(RefSeq) TMV resistance protein N-like
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIR
NB-ARC
TIR_2
AAA_22
KAP_NTPase
NACHT
ATPase_2
BrxC_BrxD
AAA_16
ABC_tran
PRK
DO-GTPase2
RecA
AAA
RNA_helicase
MeaB
AAA_18
Motif
Other DBs
NCBI-GeneID:
112524424
NCBI-ProteinID:
XP_024989992
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Position
LG 13:3299525..3306997
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AA seq
753 aa
AA seq
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MDDLKISLPDILLATNNFDENNIIGSGGFGKVYQGQSKQYGTIAVKRSDRFSSPGDHEFW
MEVSVLSAYKHENLVSLVGYCHQDGKRILVYKHESNGSLDKLLQSKQLSWILRLRIGIDI
AHGLKYLHVDIGSEKRVLHGDVKSANILLNHNWSAKISDFGLSKIRSANDPFTFLTSDVC
GTIGYHDQEYFETGVFTQKSDIYSFGVVLFEILCGIPASDQEYLGESRSLSILAKKHYEN
GKLAKLIDPDLHRQMYSTSLSTFSAIAYRCLNEHREDRPTMSQIVVQLEEALNEQLVESS
FNGLRHDAHINVRVEDHQRVSTPNDVTHKAIHQSRSQNHDVFVSFRGIDIDKTFMDHLES
TLLQKGIYGYMTDETLHWDESITPSLCNKIKESKIVLIVFSKNYAKSWWLLNELAYIMEH
KDEMGQIVMPIFYDVEPLDIQKQPEEFERTYTKNELNHKKVESWRKALKDAASIVGWTLN
DIMHGTEFIKVIVNEISRGLLPSMSMSSASTALVGINSRMQDLKSQLQVGVGGVRMIGIC
GSWGSGKSTLASTIYDEMHQDFEGCCFVKNVHTKSRMYGVKTLQEKIISKVLKQRKVVSE
NIEEGISMMKSSLCGTRVLIVLDDVDHLDHLTMLAGSQDWFGQGSRIIITTKNKNLLNAH
NINIIYDVKLLNEEEAIELFSRHAFGTCRPVEGYEKLSLKMVSKCGGHPSTLVSLGSFLH
DKDMTDWLSTSARLETIPDDETVDWFKTGDNGL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttgaagatttctctcccagatatcttgttggcaactaataactttgatgag
aacaacatcattggaagcggtggattcgggaaggtgtaccaaggccaatccaagcaatat
ggcaccatcgccgtcaagcgatctgatcgtttcagctcccccggagaccatgaattctgg
atggaggtttccgtgctttcagcttataaacacgaaaaccttgtctcactcgtcggatat
tgccaccaagatggcaagagaatactcgtttataagcacgaaagcaatgggagtctcgat
aagcttctgcaaagcaaacaactaagctggatcttacgtcttcggattggtattgacatt
gcccatggattgaagtacctccatgttgatattgggtctgaaaaaagagttctccatggt
gacgtcaagagtgcaaacatcttattgaatcacaattggtcagccaaaatttcagatttt
gggttgtcgaaaataagatctgcgaatgacccatttacctttcttacctccgatgtttgt
ggcacaatcggatatcatgatcaagaatattttgagacaggtgtcttcactcaaaagtct
gatatctactcgtttggggttgtattgtttgaaatcttgtgtggaataccagcatccgat
caagagtatctaggtgagagtcgatcgttatctatattggccaaaaaacattacgaaaat
ggaaaattagctaagctcatcgatcccgatttacataggcaaatgtactcgacttcctta
agtacattctcagcgattgcttatcgatgcttgaatgaacacagagaagatcgcccgacg
atgagtcaaattgtggtacaacttgaagaagctctgaatgagcaactagttgaatcaagt
tttaatgggttacggcacgatgcacacattaatgttagggttgaagatcatcaaagagtt
tcaactcccaatgacgtcacacataaggcaattcaccaatcaaggtcacagaatcacgat
gttttcgtgagttttagaggaatagacattgacaagacttttatggatcacctagaatcg
actcttctacaaaaaggaatctacggttacatgactgatgagacacttcactgggatgaa
tccatcactccttcgctctgcaacaaaatcaaagaatcaaagattgtcttgatcgtattt
tccaagaactatgccaaatcatggtggttgttgaacgaacttgcatatattatggaacac
aaggatgagatgggacaaatcgtaatgcccatattctatgacgtggaacccctggatatc
caaaagcaacccgaggaatttgaaaggacatatactaaaaacgagttgaaccacaagaaa
gttgaatcatggagaaaagcactgaaggatgcagcaagtatcgtcggttggacactaaac
gatatcatgcatgggacggaattcatcaaagtaattgttaacgaaatttcacgtggattg
cttccctcaatgtcaatgtcaagtgccagtacagccctagttggaataaactctcgcatg
caagatttgaaatcacaactacaagtcggggtcggtggtgttcgcatgattggaatatgc
gggagttggggcagtggtaagtctaccctcgcatctactatttatgatgaaatgcatcaa
gattttgaaggttgctgttttgtcaaaaatgttcataccaaatcaagaatgtacggtgtg
aaaacattgcaagaaaagattatctcaaaggttttgaaacaaagaaaagtggtgtcggag
aacattgaagaaggcatctcgatgatgaaaagtagcttatgcggtactagagttctaatt
gtccttgatgatgtcgatcaccttgaccacctaacaatgttagcaggatcacaagactgg
tttggtcagggaagtcgaataattatcacaactaaaaacaaaaacctgctaaatgctcac
aatataaacataatatacgatgtgaaattgttgaatgaagaagaggctattgagcttttt
agtaggcacgcatttggcacatgtagacctgtagaaggttacgagaagctttcactaaag
atggtttctaaatgtggtggtcacccatcaacgcttgtaagtctgggctcttttctgcat
gataaagacatgactgactggttgagtacctcagctagactagaaaccatccccgatgat
gaaactgtggactggttcaaaactggggacaatggactatag
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