Cynara cardunculus var. scolymus (artichoke): 112524511
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Entry
112524511 CDS
T05604
Name
(RefSeq) alpha-amylase 3, chloroplastic-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112524511
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
112524511
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
RRM_5
GlcNAc
Motif
Other DBs
NCBI-GeneID:
112524511
NCBI-ProteinID:
XP_024990127
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Position
LG 13:complement(2527763..2533703)
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AA seq
909 aa
AA seq
DB search
MATVPLQAILHRHYRRKTPKFLMESEKHKRASLYYTWKRRNCLIANGAKLCNFRPANSRV
LNITVRASSNSSATTCDSADVIFHKTFSLQRTEKVEGKILVRLDCGKDEENFQLVVACNL
PGKWVLHWGINYVNDIGSDWDQPPVEMIPLGSVPIKDYAIDTPLKKLTDTEAGFIYEVKI
DFNTKSSIAAINFVLRDEETGSCYQLKGRDFKVPLTNLSDDDGNNIGTKQEFSIWPGTLG
QLSNMLLKSNGASEDGNRDSNSKESAQKKRDLRSFYEEHDIVKQTLVDNSISVCIKRCPE
AANNLLHIETDIPGDVVVHWGVCKDASKKWEIPTGSYPAKTSAYKTKALQTQLQQKEGGC
GCSGLFPLDEGIEGFLFVLKTNNNTWLNFMGDDFYIPMPNERSFEKLEHLGEENMPKSAK
IDSSLESGEHVEVSQEVSASTDEIINEIRHLVTGISSEKSRKTKSIETQESILREIEKLA
AEAYSIFRSSIPSFTEKTVSESKEAELPLKISSGTGSGFEILCQGFNWESHKSRRWYMEL
HDKVAELSSLGFTIVWLPPPTESISPEGYMPKDLYNLNSRYGHVDELKALVNKFHEVGIR
VLGDAVINHRCAHHQNQNGVWNIFGGRLGWDDRAVVGDDPHFQGRGNKSSGDNFHAAPNI
DHSQDFVRKDLKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYMEASEPYFAVGEYWDSL
NYTYGEMDHNQDTHRQRIIDWINATNGTAGAFDVTTKGILHSALERCEYWRLSDSKGKPP
GVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPSVFYDHIFSDYKS
RISALISIRNRNKIHCRSTVEIIKAERDVYAAIVDEKLAMKIGPGDYELQSSKWCLAAEG
NDYKVWEAL
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtccctcttcaggctattctccaccgtcattatcgtcggaaaacacctaag
tttctaatggaatctgaaaaacataaacgagcttctttgtattacacctggaagagaagg
aattgtttgatcgcaaatggcgccaaactctgcaacttcaggcctgctaattctagggtt
ctgaatatcaccgttagagcgtcatctaatagctccgccactacatgcgactccgctgac
gtcatattccacaaaacattttcattgcaacgtaccgaaaaggtagaaggaaagatatta
gtcagattagattgtggtaaggatgaagagaatttccagcttgttgtagcatgcaatctt
ccagggaaatgggtccttcactggggaattaattatgttaacgacattggcagtgattgg
gatcagcctcctgttgagatgatacctctgggctctgttcccattaaggactacgcaata
gatacccctttgaaaaaattgacagatactgaagcaggcttcatatatgaagtgaagatc
gatttcaacactaaaagttcaattgcagctataaattttgtgttaagggatgaagaaact
ggatcttgctatcagctcaaagggagagattttaaggtgccacttacaaatttatctgat
gatgatggcaataatataggaactaaacaggaattttccatatggccagggactttggga
cagctatctaacatgttgctgaaatcaaatggtgcttctgaggatggaaatagagatagc
aactcaaaagaatctgctcagaagaagagggatcttcggagtttctacgaggaacatgac
attgtaaaacaaactttggttgacaactccattagtgtttgcataaagagatgtcctgag
gcggctaataatcttctacatatagagacagatattcctggtgatgttgttgttcattgg
ggggtctgtaaggatgcgagtaaaaagtgggaaattccaacgggatcatacccagctaaa
acatcagcatataagactaaggctttgcagactcagttgcagcaaaaagaaggtggatgt
ggctgctctggattatttccacttgatgaaggaattgaaggatttctttttgtgctgaaa
acaaacaataacacatggctaaattttatgggggatgatttttacatacccatgccaaac
gaaagaagctttgagaaactagaacatttgggagaggagaacatgcccaaaagtgcgaaa
atagattcttcactagaatcaggggagcatgtagaagtaagtcaagaagtttctgcaagt
acagatgaaatcatcaatgaaataagacacctggtaactggcatttcctcagaaaagagc
cgaaaaacaaaaagcatagaaacacaagaaagcattcttcgtgagatcgaaaagttagct
gccgaagcctacagtatttttagaagttctattccatcttttacagagaaaactgtatca
gaatccaaggaagcagaactccctttaaaaataagttcaggaacgggttcaggtttcgaa
attttatgtcagggattcaattgggagtcccacaaatctagaagatggtatatggaacta
catgataaagttgctgagttgtcatcacttggctttaccattgtttggttacccccacct
actgaatctatctcccctgaaggctacatgccaaaggatctatataatttgaactccagg
tatggacatgttgatgagttgaaagctcttgtcaataaattccatgaagttggtatcaga
gttctaggggatgcggtcataaaccatcgttgtgcacatcatcagaatcaaaatggtgtt
tggaatatttttggcggtcgtttgggttgggatgatcgcgcagttgttggtgatgatccc
cattttcagggtcgaggcaataagagtagtggagataatttccatgctgctccaaatatt
gatcattctcaagactttgtgaggaaagatcttaaggaatggctatgttggctaaggaag
gaaatcggatatgatggatggaggcttgattttgtgagaggattttggggtggttatgta
aaagactacatggaagcaagtgagccttactttgcggttggcgagtattgggattctcta
aattacacatatggtgaaatggatcacaatcaagatacccatcgacagagaattatcgac
tggattaatgccactaacggaaccgctggggctttcgatgtcacaacaaaaggaattctt
cattccgcacttgaaagatgtgaatattggagattatcagattcgaaggggaaacctcca
ggcgttgtcgggtggtggccgtctcgtgcggttaccttcatagaaaaccatgatacgggt
tcgacccagggtcattggagatttcctggtggaaaggagatgcaaggatatgcttacata
ctaactcaccctggaacaccatcggtcttctatgatcatattttttcggactacaaatcc
cgaatatctgcactcatctccatcaggaaccgcaacaagatccattgtcgtagcaccgtt
gaaatcatcaaggcggaacgtgatgtttatgctgcaattgttgatgaaaagttggcgatg
aagattggaccaggtgactatgaactccaatcgtcgaaatggtgtttggctgctgagggc
aacgactacaaggtctgggaagcattatga
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