Cynara cardunculus var. scolymus (artichoke): 112524893
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Entry
112524893 CDS
T05604
Name
(RefSeq) leucine-rich repeat receptor-like protein kinase TDR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_8
LRR_4
Pkinase
PK_Tyr_Ser-Thr
LRRNT_2
LRR_9
APH
Motif
Other DBs
NCBI-GeneID:
112524893
NCBI-ProteinID:
XP_024990603
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Position
LG 13:22240948..22244178
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AA seq
917 aa
AA seq
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MNHHCRRPLLLLLLFFFFFRLLSADALPSQLVSLLSLKSSLVDPLDTFHDWETSKPGQQP
VWCSWSGVKCDPETYQINSLDISNRNLSGTIPAEIEYLTSLRHLNISVNQFAGTLPTAIF
NLPFLQTLDINHNLFSSAFPPGISKLKCLSYFGAYSNSFTGQLPTEFVRLRFLEHLNLGG
SYFEGEVPKCYGRFQRLKFLYLAGNNLSGQIPDELGLLTSLQHLEIGYNAFTGIVPMKFA
SLSNLSLLDISNAGLSGEFPIAVTNMTKLKTLLIFKNNFHGEIPAAIGKLQSVEILDLSN
NNFSGSIPEEISSLKNLTQLSLMNNKFTGIVPEGIGELPRLEFLFLWNNSLTGILPQKLG
LNSRLQKLDVSSNSLSGPLPPNLCHGNNLGRLLLFSNKFSGALPPSLANCTSLYRFRIQD
NRFNGSIPAGFGSSPNITYMDMSANNFSGPFPADLFNAVQLELLNVSENSFDDLLPENIW
SAPSLQIFSASYSQLRGKIPNFRDCKNIYKIEIEGNELSGSLPWDIDHCLKLISLNLRRN
SISGIIPWEISSLPSITEVDLSHNLLSGTIPSSFGNCSTLEGFNVSYNQLTGPVPSTGIA
FSSLHPSSFNGNEGLCGGVLRKPCSTEKENEVKPQHPKKTAGAILWIMAAAFGIGLFILV
AGIRCFRANYQRRFIVEEKEIGPWKLTAFQRLNFTADDVADCLSMTGKIIGTGSAGTVYK
TEMPGGEIIAVKKLRVVVHRDLKPSNILLDGEMEARVADFGVAKLIECNESMSVIAGSYG
YIAPEYAYTLQVDEKSDIYSFGVVLMELISGRRSVESEFGDGNSIVDWVRSKIKTKEGTN
EVLDQNAGGACSRVREEMKVILKVALLCTSRNPPDRPSMRDVVSMLQEAKPKRKSPEDGG
RVVVNGGGKPPAQKCTS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccattgtcgccgccctctccttctcctcctcctcttcttcttcttcttccgc
ttactctccgccgatgctcttccttcacagcttgtttcacttctttctctaaaatcatct
cttgtagaccctctcgatacgttccatgactgggagacatccaaacctggacaacaaccc
gtttggtgttcctggtccggtgtcaaatgcgaccccgaaacctaccagattaattcattg
gacatctctaatcggaatctttcaggcacgattccggcagaaatcgaatacttgaccagc
ttacgtcatttgaatataagtgtgaaccaattcgccggaactctcccgacggcaatcttc
aacctgccttttcttcagactcttgatatcaatcataaccttttcagttcagcgtttcca
ccgggtatttccaaattgaagtgtctttcatactttggtgcttatagtaacagcttcact
gggcaattgccaacggagtttgttcggttgaggtttctagagcaccttaatctcggtgga
agctacttcgaaggtgaagttcctaagtgttatggcaggtttcaacggttaaagttctta
tacctcgctggaaacaatctcagtggtcaaattccagatgagttaggtcttctaacgtcg
ctccagcatttagaaattggatacaatgcattcacaggcatagttccgatgaagtttgct
tctttatccaatttgtcattgctcgacatttctaatgctggtctttctggcgaatttccg
attgctgttacgaacatgacgaagctgaaaacattgctaattttcaaaaataattttcac
ggtgaaattccggcagctatcggcaagctgcaatccgtcgagattctagatttgtccaat
aacaacttttcagggagcataccggaggaaatttcatcactcaagaatcttacgcaattg
agtctaatgaacaataaattcaccggaatcgttccagaaggaattggtgagcttccgagg
ctcgaatttctgtttctctggaacaattctctcacaggaattctgccacaaaagttaggg
ttgaattcaaggttacagaaactcgacgtctcatcaaactctctctccggtccacttcca
ccgaatctgtgtcatggcaacaatctaggaagattacttctcttttcaaacaagttttcc
ggcgctcttccaccgtctctagcaaattgcacatcgttgtacaggtttcgcatccaagat
aacagattcaacggatcaatccctgccggctttggaagttcgcctaacattacttacatg
gacatgagcgcgaacaatttctctggaccatttccggcggatttattcaatgcagttcag
ttagagttactaaatgtatcggaaaattcgttcgacgatctgttgccggaaaatatctgg
agcgctccgagtttacagatattttcggcaagttatagtcaacttagaggtaaaattccc
aacttcagggactgtaaaaacatctacaagatcgaaatcgaagggaacgaattgagcggt
agccttccttgggatatcgatcactgcctgaagttaatttcactgaacttacgacgtaat
tcaatttctggcatcataccatgggaaatctcctctcttccttcgataaccgaggttgat
ctatcacataaccttctttctggtaccattccttcttctttcggtaattgcagtacgtta
gaaggcttcaatgtttcatataatcagctaaccggaccggtgccttccacgggaattgcg
ttttcaagccttcatccgtcgtcgttcaacggaaacgaaggcctctgcggcggagtcctt
cgtaaaccctgcagcacggaaaaagaaaacgaggtaaaaccacaacatccaaaaaagacc
gccggagcaatcctgtggataatggctgcagcatttggtataggtctcttcatcctcgtc
gccggaatccggtgcttccgtgcaaactaccaacgacggttcattgtggaagaaaaggaa
atcgggccgtggaaactaaccgccttccaacgcttgaacttcacggctgatgacgtggcc
gattgtttatcgatgaccggtaagatcatagggacaggttccgctggaaccgtttacaag
acagagatgccaggtggcgagatcatagccgttaagaagctgcgggtggttgtccaccgt
gatctgaagccaagcaatattctattggatggagagatggaagcgagggtggcggatttt
ggggtcgccaagctcatcgaatgcaatgaatcaatgtcggtgattgcagggtcctatggc
tacattgcccccgaatatgcatacactctacaagttgatgagaaaagtgatatatacagt
tttggggtcgttttaatggaattgattagtggtaggagatcggtggagtctgaatttggg
gatggtaacagcattgtggattgggtgcggtcgaaaatcaagaccaaagaagggacaaac
gaagtgttggatcaaaatgcaggtggtgcttgtagtcgggtgagagaggaaatgaaggtt
atattgaaggtagcattgctatgtacaagtagaaacccgccggaccggccttcgatgaga
gatgtggtgtcgatgctacaagaagccaagccgaagaggaagtcgccggaagatggtggt
agagtggtggttaatggtggtggtaaacctccggcacaaaagtgtaccagttga
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