Corynebacterium canis: CCANI_05675
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Entry
CCANI_05675 CDS
T09233
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ccaw
Corynebacterium canis
Pathway
ccaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCANI_05675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaw03021
]
CCANI_05675
03019 Messenger RNA biogenesis [BR:
ccaw03019
]
CCANI_05675
Transcription machinery [BR:
ccaw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CCANI_05675
Messenger RNA biogenesis [BR:
ccaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCANI_05675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJY74981
LinkDB
All DBs
Position
1263962..1265842
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AA seq
626 aa
AA seq
DB search
MTDTDTTANLAALRLPELRRMAQSLGIRGISTMRKGALIEAIQAGGAASANTAPGASAPA
EPSVEGEVAPVQRRRRRVTTEVIATAEAEPAPTAPEAPVSPVSEAPAEAESGDVKVTAEE
REAEQREAKAEERHESRSQARRARRNRARSNQRERERREREAQRETVAPADEAAEAPAEQ
QAPEQEAVVERQERPERFTREQREPRDDDRRGRSRNRRDRGRNRRDRDHMDELREDDVLQ
QIAGIVEILENGNAFVRTSGYQSGPADVYVNSQLIRRLGLRRGDAVIGQIKVGGPQQVHG
TGRNRQKYNVLQRVDQINGLSVEEARHRPEFAKLTPLYPNQRLRLETDPKILTTRVIDLI
MPIGKGQRALIVSPPKAGKTTILQNVANAIATNNPECYLMVVLVDERPEEVTDMQRNVKG
EVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRIL
SGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKL
DRKISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRILSALDNQQAIDLLIKQLKK
TKSNGEFLMQVASSAPMAGVTEEDFS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacaccaccgcaaacctagctgccctccggttgccggagcttcgcagg
atggcgcagtctttggggatccgcggtatttcaacaatgcgcaagggtgctttgattgag
gcaattcaggctgggggagccgcttctgcgaatactgcccctggtgcgtcggccccggct
gagccgagtgttgagggggaggtcgcgcccgttcagcgtcgccgccgccgtgtcactacc
gaggtgattgctaccgccgaagcggagccagcacctaccgcgcctgaggcgcccgtttcg
ccggtttcggaagctcccgccgaagcggagtctggcgatgtgaaggttaccgccgaggag
cgggaggcggagcagcgggaggcgaaggcggaggagcgccatgagtcgcgttcgcaggct
cgccgggcgcgccggaatcgtgcgcgtagtaatcaacgtgagcgggagcgtcgtgagcgg
gaggcgcagcgtgagactgtggctccggcggatgaggctgccgaggcaccggcggaacaa
caggcgccggagcaggaggctgtggttgagcgccaggaacgcccggagcgtttcacccgt
gagcagcgtgagccgcgtgacgacgaccgtcgtggccgcagccgtaaccgccgtgaccgt
ggccgtaatcggcgcgatcgcgatcatatggatgagctgcgggaagacgatgtattgcag
cagatcgccggcatcgttgagattttggaaaacggtaatgcgtttgtgcgcacgagcggc
taccagtctggcccggcggatgtgtatgtgaattcgcagctgattcgccggttgggtttg
cgtcggggtgacgcggtgattggccagattaaggttggggggccgcagcaggtgcacggc
acgggccggaatcgccagaaatataatgtgctgcagcgggtggatcagattaatggtctg
agcgtggaggaggcccgccaccgcccggagtttgccaagctgacgccgttgtatccgaat
cagcgcctgcggttggaaacggatccgaagattctgaccacccgcgtgattgacctgatt
atgccgatcggcaaggggcagcgcgccctgatcgtgtccccgccgaaggccggtaagacg
acgattttgcagaatgtggccaacgctatcgccacgaataatccggagtgctatctcatg
gtggtgctggtggatgagcgccccgaagaggttacggatatgcagcgtaacgtcaagggc
gaggtaatcgcttctactttcgatcgtccgccgagcgagcacaccgccgtggcggagctg
gccatcgagcgcgcgaagcgcctggtggagcagggccaggacgtggtcgtgctgctggat
tccattacccgcctgggccgggcgtataacaattcctccccggcgtcgggccgtatcctg
tccggcggcgtggattccaatgccttgtatccgccgaagcgtttcctgggtgccgcccgc
aatattgaaaacggtggttcgttgaccattatcgccacggcgatggtggagacgggttcc
gcgggtgacaccgtgatctttgaggagttcaagggcacgggcaatgcggagctgaagctg
gaccgtaagatttctgagcggcgcgtgttcccggccgtggatgtgaacccctcgggcacc
cgcaaggatgagctattgctcgccccggaggaggcgcggattatgcataagctgcgccgt
atcctgtctgcgctggataatcaacaggccatcgatctgctgatcaagcagctgaagaag
accaagtccaatggtgagttcttgatgcaggttgcgtcgtccgcgccgatggctggcgtg
acggaggaggacttctcctaa
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