KEGG   Corynebacterium canis: CCANI_05675
Entry
CCANI_05675       CDS       T09233                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
ccaw  Corynebacterium canis
Pathway
ccaw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccaw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCANI_05675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaw03021]
    CCANI_05675
   03019 Messenger RNA biogenesis [BR:ccaw03019]
    CCANI_05675
Transcription machinery [BR:ccaw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CCANI_05675
Messenger RNA biogenesis [BR:ccaw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CCANI_05675
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 Spore_III_AA NACHT AAA_22
Other DBs
NCBI-ProteinID: WJY74981
LinkDB
Position
1263962..1265842
AA seq 626 aa
MTDTDTTANLAALRLPELRRMAQSLGIRGISTMRKGALIEAIQAGGAASANTAPGASAPA
EPSVEGEVAPVQRRRRRVTTEVIATAEAEPAPTAPEAPVSPVSEAPAEAESGDVKVTAEE
REAEQREAKAEERHESRSQARRARRNRARSNQRERERREREAQRETVAPADEAAEAPAEQ
QAPEQEAVVERQERPERFTREQREPRDDDRRGRSRNRRDRGRNRRDRDHMDELREDDVLQ
QIAGIVEILENGNAFVRTSGYQSGPADVYVNSQLIRRLGLRRGDAVIGQIKVGGPQQVHG
TGRNRQKYNVLQRVDQINGLSVEEARHRPEFAKLTPLYPNQRLRLETDPKILTTRVIDLI
MPIGKGQRALIVSPPKAGKTTILQNVANAIATNNPECYLMVVLVDERPEEVTDMQRNVKG
EVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRIL
SGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKL
DRKISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRILSALDNQQAIDLLIKQLKK
TKSNGEFLMQVASSAPMAGVTEEDFS
NT seq 1881 nt   +upstreamnt  +downstreamnt
gtgaccgatacggacaccaccgcaaacctagctgccctccggttgccggagcttcgcagg
atggcgcagtctttggggatccgcggtatttcaacaatgcgcaagggtgctttgattgag
gcaattcaggctgggggagccgcttctgcgaatactgcccctggtgcgtcggccccggct
gagccgagtgttgagggggaggtcgcgcccgttcagcgtcgccgccgccgtgtcactacc
gaggtgattgctaccgccgaagcggagccagcacctaccgcgcctgaggcgcccgtttcg
ccggtttcggaagctcccgccgaagcggagtctggcgatgtgaaggttaccgccgaggag
cgggaggcggagcagcgggaggcgaaggcggaggagcgccatgagtcgcgttcgcaggct
cgccgggcgcgccggaatcgtgcgcgtagtaatcaacgtgagcgggagcgtcgtgagcgg
gaggcgcagcgtgagactgtggctccggcggatgaggctgccgaggcaccggcggaacaa
caggcgccggagcaggaggctgtggttgagcgccaggaacgcccggagcgtttcacccgt
gagcagcgtgagccgcgtgacgacgaccgtcgtggccgcagccgtaaccgccgtgaccgt
ggccgtaatcggcgcgatcgcgatcatatggatgagctgcgggaagacgatgtattgcag
cagatcgccggcatcgttgagattttggaaaacggtaatgcgtttgtgcgcacgagcggc
taccagtctggcccggcggatgtgtatgtgaattcgcagctgattcgccggttgggtttg
cgtcggggtgacgcggtgattggccagattaaggttggggggccgcagcaggtgcacggc
acgggccggaatcgccagaaatataatgtgctgcagcgggtggatcagattaatggtctg
agcgtggaggaggcccgccaccgcccggagtttgccaagctgacgccgttgtatccgaat
cagcgcctgcggttggaaacggatccgaagattctgaccacccgcgtgattgacctgatt
atgccgatcggcaaggggcagcgcgccctgatcgtgtccccgccgaaggccggtaagacg
acgattttgcagaatgtggccaacgctatcgccacgaataatccggagtgctatctcatg
gtggtgctggtggatgagcgccccgaagaggttacggatatgcagcgtaacgtcaagggc
gaggtaatcgcttctactttcgatcgtccgccgagcgagcacaccgccgtggcggagctg
gccatcgagcgcgcgaagcgcctggtggagcagggccaggacgtggtcgtgctgctggat
tccattacccgcctgggccgggcgtataacaattcctccccggcgtcgggccgtatcctg
tccggcggcgtggattccaatgccttgtatccgccgaagcgtttcctgggtgccgcccgc
aatattgaaaacggtggttcgttgaccattatcgccacggcgatggtggagacgggttcc
gcgggtgacaccgtgatctttgaggagttcaagggcacgggcaatgcggagctgaagctg
gaccgtaagatttctgagcggcgcgtgttcccggccgtggatgtgaacccctcgggcacc
cgcaaggatgagctattgctcgccccggaggaggcgcggattatgcataagctgcgccgt
atcctgtctgcgctggataatcaacaggccatcgatctgctgatcaagcagctgaagaag
accaagtccaatggtgagttcttgatgcaggttgcgtcgtccgcgccgatggctggcgtg
acggaggaggacttctcctaa

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