Caretta caretta (Loggerhead turtle): 125623224
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Entry
125623224 CDS
T09292
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04142
Lysosome
ccay04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125623224 (CLTCL1)
04142 Lysosome
125623224 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125623224 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125623224 (CLTCL1)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
125623224 (CLTCL1)
Exosome [BR:
ccay04147
]
Exosomal proteins
Proteins found in most exosomes
125623224 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
125623224
NCBI-ProteinID:
XP_048678239
EnsemblRapid:
ENSCECG00000000440
LinkDB
All DBs
Position
15:18922327..18983301
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVFHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNSKPSTLFCFAVRSPAGGKLHVIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPSSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYAEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSCVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENSPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAASRNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFS
KVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAASLFACYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFNKVDKL
DASESLRKEEEQVAEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccattcgcttccaggagcacttccagctccaaaacctgggaatt
aacccagcaaacattggatttagcactctgacaatggaatctgataaatttatctgcatc
agagagaaagtaggggaacaagcacaggtagtgataatcgatatgagtgatccaactaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatcctgcttctaaagtcatt
gctctgaaagcggggaagacgcttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccatactatggcagaggaagtgatcttttggaagtggatatcggtaaacacagttgcc
ttggtgacagagacggcagtctttcattggagcatggagggagaatctcagccccaaaag
atgtttgacaggcatgctagtcttgcaggctgccaaatcatcaactacaggacagatgaa
caccaaaaatggctactcctaataggaatttcagcccagcaaaatcgtgtggttggtgca
atgcaattgtactcagttgataggaaggtttcccaacctatagagggtcatgcagcagcc
tttgcagaattcaaaatagaaggaaactccaaaccttccacgctcttctgttttgctgtg
cggagcccagcaggaggcaagctgcatgtaattgaagtaggtcaacctgctgctggaaac
cagccctttgtaaagaaagctgttgatgtgtttttccctcctgaggctcagacagacttc
cctgtggcaatgcagattggaactaagcatggcgttatctacctgatcacaaagtatgga
tacattcacatgtatgacttggaatctggagtgtgtatttacatgaaccgtattagtgct
gacacaatctttgtaactgctcctcatgaaccttcctctggcattattggtgtgaataaa
aaaggacaggtgctttcagtttgtgttgaagaagataacatcgtgaactatgctacaaat
gttctccagaatccagacctgggtctgcgtatggctatccgcagtaacctggctggggca
gaggaactgtttgccagaaagttcaatacgctctttgcacaaggaagctatgcagaagct
gctaaagtggcagcatctgcaccaaagggaatcctgcgtaccagtgatactatcaggaag
ttccaaagtgtaccagcccagcctgggcaggcttctcctttgctgcagtattttggtatc
ttgcttgatcaagggcaacttaacaaatttgaatctttagaactctgccgtccagtcctg
caacaagggcgcaagcagctcctggagaaatggctgaaggaagataagctggagtgctct
gaggagctaggagacctggtgaagacagctgatccaacccttgcactcagtgtttacctt
cgtgctaatgtgccaaacaaagtcattcagtgctttgcagaaactggtcaattccagaaa
atagtgctctatgccaaaaaggttggctatacaccagactggatcttcttgttgagaagt
gtgatgagagtcagcccagaacagggactgcagttctctcagatgctggtgcaggatgag
gagcccctggctaatattaaccagattgtagatgtattcatggagaacagtctcattcag
cagtgcacttcctttttgttggatgctttgaagaataatcgccctgctgaaggacacctt
cagacacgtctgctggaaatgaatctgattcatgcaccacaggttgctgatgccatcctt
ggaaaccagatgtttacacactatgatcgtgctcacattgcccagttatgtgaaaaggca
ggcttgctacagagagcattggagcactacactgatctctacgatataaagcgtgctgta
gttcacactcacctcttgaaccctgagtggcttgtaaacttctttggctccctgtcagtt
gaggactctgtggaatgtctccgtgcgatgctatcagccaacatccgacaaaatctacag
ctctgtgtgcaagtagcttctaaataccatgagcagcttggcacccagtctctcgtggag
ctctttgaatctttcaaaagttatgaaggattgttttatttcctgggttctattgtgaac
ttcagccaggatccagatgtccacttcaaatatattcaggcagcctgcaagacgggtcaa
attaaagaggtggaaaggatctgccgtgaaagtaactgctataaccctgaacgagtgaag
aattttctcaaggaggccaagctcacagaccagcttcctctgatcattgtttgtgacaga
tttgactttgttcatgacctggttctctatttataccgcaacaacctgcagaagtacata
gagatctatgttcagaaggtgaatccaagtcgtataccagcagtgattggaggactgctt
gatgtggattgttctgaagatgttattaagaacttgatcatggtggttagaggccagttc
tcaactgatgagctggtggctgaagtggaaaaaagaaataggcttaagttgctgctgcca
tggctggaatctagaattcatgaaggctgtgaagaacctgccacccacaatgctctggct
aaaatctacattgacagtaacaataatcctgagcggtttctccgggagaacccatactat
gacagctgtgttgtaggcaaatactgtgaaaaaagggaccctcatttggcctgtgttgct
tatgagagagggcaatgtgaccttgaactcatcaaggtttgcaatgagaactccttgttc
aagagtgaggctcgctatttggtacgcagaaaggatccagaactttgggcaaatgtcctt
gaggaaaatagtccattcagacgacagctcattgatcaggttgtccagacagccttatct
gaaacacaagatcctgaagaggtttctgttactgtgaaagctttcatgactgctgatctg
cccaatgaactaattgagcttcttgagaagatagtcttggacaactctgtgttcagcgag
cataggaacctgcagaatcttctgattctgactgccattaaagctgatcgcactcgtgta
atggagtatatcaatcgtctggataactatgatgccccagatattgcaaacatagccatc
agtaatgagctatatgaagaagcctttgctatcttcaggaaatttgatgttaatacttct
gcaatacaggtgctgatagagcacattggcaacctggaccgtgcctatgaatttgcagag
agatgtaatgaaccagctgtatggagccaactggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatatcaaggctgatgatccctctgcttacatggaagtt
gttcaagcagctagtagaaacaataactgggaggatctggttaaattcttgcaaatggcc
agaaaaaaggccagagagtcctacgtagagactgaactgatctttgctttggcaaaaacc
aaccgcctctcagagctggaagagtttgtcagtggtcctaacaatgcccacattcagcag
gttggagatcgctgctatgaggagggaatgtatgatgcagcaaagttgctctacaacaat
gtatctaactttgcccgcctggcatctaccttggtgcatcttggagagtatcaggcagca
gtagacagcggccgcaaagcgaacagcaccaggacctggaaagaggtgtgctttgcatgt
gtggatggaaaggagttccgcctagcacagatctgcggcttgcacatagtaatccatgca
gatgagcttgaagagctgattagctattaccaggatcgcggctactttgaagaactgatt
gccctcttggaagcagctttgggcctggagcgtgctcacatgggaatgttcacagaactt
gccatcttgtactccaaattcaaacctcagaagatgagggaacatctggagctcttctgg
tccagagtcaacattccaaaggtgctcagagcagcagaacaagctcacctctggggagaa
ctggtcttcctttatgacaagtatgaagagtatgacaatgcaataattacaatgatgaac
catcccactgatgcctggaaagaagggcagttcaaagacataattgctaaggtggccaat
gtggaactgtattacaaagccctgcagttctatttggactacaaacctctgttgatcaat
gatcttctgctcgtattatctccacggctggatcataccaggacagtcagctttttctca
aaggttaatcagctgcctctagtaaagccttacctgcgttcagtccagaaccacaacaac
aaaggagtcaatgaggctctaaacaatcttctgacagaggaggaggattatcaggggttg
agagcatctattgatgcatatgataactttgataacatcacactagctcagcgcttggag
aaacatgagttgattgaatttaggcgtatcgcagcctacttgtacaagggtaataatcgt
tggaaacagagtgtggagctctgtaagaaggatcgtctctacaaggatgccatgcagtat
gctgcagaatccaaagatgcagagctggcagagaagctgctccagtggttcctggaggaa
ggcaaacaggagtgttttgcagcctctctctttgcatgctatgacttgctgcacccggat
gtggtccttgagctggcatggaggcataacatcatggactttgcaatgccttatttcatc
caggtgatgagggagtaccttaccaaagttgatgggctgtttaataaggtggataaactt
gatgcttctgaaagcctaaggaaagaagaggaacaagtagctgaacccactccaatagta
tttggccagcagctaatgttaacagcaggccccagcgcagtacctccccaggccaacttc
ccatatggatacacagctccaggattcacccagccacctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
