Caretta caretta (Loggerhead turtle): 125623395
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Entry
125623395 CDS
T09292
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125623395 (SEC16A)
Membrane trafficking [BR:
ccay04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125623395 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
125623395
NCBI-ProteinID:
XP_048678642
EnsemblRapid:
ENSCECG00000000640
LinkDB
All DBs
Position
16:complement(6810936..6851434)
Genome browser
AA seq
2484 aa
AA seq
DB search
MQPPPQTVPAGAGGPPPAGIARNTYWRNSPFSRRANAPVSGATAPVQPVTDPFAFGRQTP
QGSLLGNPSKGNPLIMPGPAPSVFPRPAGVHSSQSYAGDNSHGLPTSLPTSVSQPGITSN
TFSNVVTPSSPAHIINSTAEIHQMHPNAEHGPHNSSAQSLYNTGAAHEKSLSGHPAMAHV
ANRPLSRQDINRDPSNNSSVPTVAPFLPPPLQQTPPQWRPIQDNLQPQVQNYWPYTEPPS
QNAVYSVSHSSAVKSHLPPQANLHQGPVHQHIPQSTMQAPLPIGGEKNEISSFPVANHHV
NNFQPENMFRQNVRMTNPWPSQPYQEQFYPQPLLPDAGFVNPITQENNPQKQSQNVSETP
SGHTSTNADSGTISMFFKGDEAENEEILSSEKNDLSGKANYDACQLNSGHMYHQPLHPQQ
AATSVLSQPEISTGSANETVQKGMDVQYFSKTISSQHDTQTSKNSMYISDDKANDSKAHE
NVGSHYENVENLECIQNQEVLPSEPQNINRSSPSVGSDLYRYGSLPGQLLPKNTIVSHAE
RGPNLEAPDLLPHPVRSDSVSSNYSNISHRSVSSSTRPQELIGTFIQQESGKPDEESSAS
FFKQIDSSPLGGDSSEPNVSKNYHSNLSQPQTPSPPKPTGIFQTSANSSFEPVRSHGVGV
KPAEVDQAKMVVELRENHPNQKNTKKSMAMPAASPGNLEQPPDNLETIFMPQVHTLPLTV
TGESGNMLQPASGPVVENIQLVPEKRPSTRAQGATKKCESPATTLWAHNELPNFGGNVLL
APAAPAVYVPAKQTVEIIQPPEEGLSNQQPNKPECVPVQPSQPGNVSSENLENPPKMGEE
EALQSQASSGYASLLSSPPTESLQNHPILIAQPNQSYNLAQPINFSLSLCNQLTRNENNL
SLKDPGVEDKPVTGLQAPHAGGILPGEDVSLSVMQVGSSVNMPPSSNLSHSNLLQSPVNS
SEITSNQSTNLMQPPSQTPVNLAPEGQKNTNSEGCLPEFASKPGSDSAVAPGTNLPSGNA
SVVLVPPVYTMVPNNNSTNDSHSHEENSGALDFTVIRTLDKSKTSNPGQMHNPLLSCGPV
FPQQPVKHASQMGPDTYDKQHFYQQVTKDVQLQAPSDRATQGALLSQQQKQTAQMPQTVP
SGQSLVPSNYQMASGIKPTQAPQRQENQMPTNRYYPAGLPEGSSTQPPTSYSQTSADKQP
FSGQSLSAPTSSASVTTSQRAMPAMQQEQNPPPSQTPQDACGPPQNPYYYYRHPYDAYQT
PYPQPYPPLDLRSAAHLYYQDDVYGQYGPRYHHYGRSNAAYVEPGGYRYGEPERPSSRAS
QCSDRPPSRQGYTEDYYNPKSGWNDYYADYYANPYNYGDPSRWERYPSAYDSRYRDPRSY
DQRYWYDTEQNPYQKREAYPYDNRQDRYEDHWRYDPRFAGSFDDETEPHRDPYGDEFDRR
SVHSEHSAHSLRSSHSVHSHQSSFSSRSQQSQLYRSNHDLTANAYETTTQPVSLHTDYPY
SGYPANFDGQQPFTDYGYSAETGWPSVEQVPSRPSTPEKFLVPHVCARFGPGGHLTKVLS
NLPSEGQPALVEIHSMETMLQHMPEQEEMRAFPGPLAKDDTHKVDVINFAQNKATQCFQN
ENLIDKESASLLWDFIVLLCRQNGTVVGTDIAELLLRDHKTVWLPGKSPNEANLIDFTNE
ALEQVEEESGEAQLSFLTDSLITTIDSLERETERFRELLLYGRKKDALESAMKHGLWGHA
LLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLA
MVLSNLTNNMDVESRTITTMGDTLASKGLLDAAHFCYLMAQIGFGVYTKKTTKLVLIGSN
HSLPFLKFATNEAIQRTESYEYAQSLGTQPCCLPNFQVFKFIYACRLAEMGLAAQAFHYC
EVISKTVLKNPYYYSPVLIGQLIQISSQLRLFDPQIKEKPEQELFIEPSWLVRLRHLDGQ
IKDGTIAYNADRSTPQQYACSTPSSELDHISQCDGTGSGQEMGPATENPLLASLLPNTVY
PMQGVQLMPSAPQTILEESAAVTPPIQQETVGVPFYPVAPPSIGPGSGFAPPGFPNQYGA
EQSSLYLGSTMPPGGPPPQAAEPRPEEQLNQETAMQRIPQESPIQKTFPEQREEDFYGKM
ANMAPGRRSRSTSQSSAHMGYGRRSRTTSESSTHSIGRERCNSAAKQPSPPPPSIPEGKE
TNKEIKKEPAARKSGANWFRWLMGKGKNEAHLPDDKNKSIVWDEKKQRWVNLDEPEEESK
PLPPPPAGVPKAPQTAPPGPGGPPGVNMFSRKAAGTRARYVDILNPSGAKCSGAVPAPSD
LFAPLAPMPIPANLFVPNSVPEEQQPMEGSGAREQTFSANQVSADVTTEPQYLNSTMLPP
GSELPGSNPDGSHSGELSRSSSMSSLSREVSQHFNQPLRSVPPSGGPPAGTVQFYNPSQF
AQSPATTGSSRLGRIGQRKYPTLK
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacctccacagacagttccagcaggggctggtggacctcctcctgcaggaatt
gctcggaacacgtattggcgaaacagcccatttagtagacgggcaaatgcaccggtctca
ggagcaactgccccggtgcaacctgtgacagacccttttgcatttggcaggcaaactcca
caaggttccctgttaggtaatccatccaaaggcaatcccctgattatgccaggtcctgct
ccatcagtgtttcctcgtccagctggtgtgcattcttctcagtcatatgcaggggataat
tctcatggactgcctacatctttaccaacatctgtatctcaaccaggaataacttcaaat
acattttctaatgtggtgactccttcatcaccagcacatattataaatagcactgcagaa
atccatcaaatgcatccaaatgcagaacatggaccccataactcttcagcacagtcgctt
tataatacaggagcagcacacgaaaagtctctcagtggacatccggctatggcacatgtg
gcaaacagacccctaagcagacaagatattaatagggatccaagcaacaatagttcagtg
cctacagtagcaccatttctccctccacctcttcaacaaaccccacctcagtggagaccc
attcaagataatctgcagcctcaagttcagaactactggccctatactgagccaccttct
cagaatgcagtttatagcgtttctcactcttctgctgttaagtcccatcttcctccccaa
gcaaatctgcatcagggacccgtacatcaacatattccacaaagtaccatgcaagcacct
ttgcccattggtggtgaaaagaatgagataagcagcttcccagttgccaaccaccatgtg
aacaactttcagcctgaaaatatgtttagacagaatgtaagaatgactaatccttggcca
agtcaaccttaccaagaacagttttacccacagcctcttttaccagatgctggttttgtt
aatcccatcactcaggaaaataacccacaaaaacaatctcaaaatgtgtctgaaacacca
agtggacatacatccacaaatgcagattcaggaactatctccatgtttttcaaaggggat
gaggcagaaaatgaagaaatactttcatcagaaaaaaatgatctgtccggtaaagctaac
tatgatgcttgtcagctaaattcaggacatatgtatcaccaaccactgcatcctcagcaa
gctgcaactagtgttctctctcaaccagagattagcacaggctcagctaatgagacagtg
caaaagggaatggatgtccaatatttttctaaaactataagcagccagcatgacacacag
accagtaaaaactctatgtatattagtgatgacaaagcaaatgatagcaaagctcatgag
aatgttgggtcacattatgaaaatgttgagaacctggaatgcattcagaatcaagaagtt
ctgccaagcgaaccacagaatattaatcgctcgtccccaagtgtaggttctgatctgtac
agatatgggtcactaccggggcagttgcttccaaagaacaccattgtgagccatgcagaa
agaggaccaaatctagaggcacccgacttgttacctcatccggtccgatctgatagtgta
tcctcaaactacagtaacataagccacaggagtgtttctagttcaacaagacctcaagag
cttattggtacatttattcagcaagaaagtgggaagcctgatgaggagtcctctgccagt
ttctttaagcagattgactcctctcctttgggaggagattcgagtgagccaaatgtcagc
aagaattaccatagtaatctgtcacagcctcaaactccaagtccccccaaacctacagga
atatttcagacaagtgcaaatagttcttttgaaccagtaaggtcccatggggttggggta
aaacctgcagaggttgaccaagcgaaaatggtggttgaactaagagagaaccacccaaac
caaaagaatactaagaaaagtatggctatgccagctgcctcaccaggtaatcttgaacag
ccgccagataacctggaaactattttcatgccccaagtacatacattgcctcttacagtc
actggtgaatctggaaacatgttgcaacctgctagtggacctgttgtggaaaacatacaa
ttggtacctgagaaaagaccctcaactagagcacagggagcaactaaaaagtgtgagagt
ccagcaacaactctctgggctcacaatgagttacctaactttgggggtaatgtccttcta
gcccctgctgctcctgcagtgtatgtacctgctaaacagacagtggaaattattcaaccg
cccgaagaagggctgtccaatcagcagccaaataaaccagagtgtgttcctgtgcagccg
tcccagcctggaaatgtatcttctgaaaaccttgagaatcctcccaaaatgggagaagag
gaggcacttcagtctcaggcaagttcaggttatgcaagtttgttgtcttctccacccaca
gaatctctgcaaaatcatcctattttgattgcccagcctaatcaaagctataatttggct
cagccaattaatttttctctttctttgtgtaatcagctaaccaggaatgaaaataatctt
tcactgaaagatcctggagttgaagataaacccgtaacaggactccaagctccacatgct
ggtgggatcctccctggggaagatgtgtcattgtctgtgatgcaggttggatcttcagtt
aatatgcctccatcttctaatctgtcacattctaatttattacaaagccctgttaattct
tcagaaatcacctcaaatcaatccacaaatttgatgcaacctccatctcaaactccagtt
aatttggctccagaaggtcaaaagaatactaattcagaaggttgtctgcctgaatttgct
agtaaaccaggatctgactcagctgttgctcctgggacaaatctccccagtggaaatgca
agtgtggtgttagtcccaccagtgtataccatggtgcctaataataattctacaaatgac
tcacatagtcatgaagaaaattctggagcacttgattttacagtaatacggacactggac
aaaagcaagaccagtaatcctggacagatgcataatccgttactttcttgtggtccagta
tttcctcaacagccagtcaaacatgctagccagatggggccagacacatatgacaaacaa
catttctatcaacaggtaacaaaagatgtgcagcttcaggctccatcagacagagccaca
cagggggcattgctttctcagcaacaaaagcagactgctcaaatgccgcaaacagtacct
tctgggcagtccttggttccttcaaattatcagatggcttcaggaattaaacctacccaa
gcaccacagcgacaagagaatcagatgccaactaataggtattatccagcgggtctccca
gagggtagttcaacacagccaccaacaagctatagtcaaacaagtgctgataaacaacca
ttttctggtcagtcattgagtgctccaacttcatcagcatctgttaccaccagtcagcga
gccatgccagccatgcagcaagagcagaatccaccaccttctcagactcctcaggatgcc
tgtgggccaccacaaaacccttactactattacagacatccttatgatgcttatcagact
ccatatccacagccttaccctcccctggatcttagaagtgcagctcatctctattaccag
gatgatgtctatggacaatatggtccccgctaccatcactatggtagaagcaatgctgcc
tatgtggagcctggtggttatcgatatggtgagcctgagcgtcctagttccagagctagt
cagtgctctgatagacctccttctagacaggggtatactgaagattattataatccaaaa
agtggttggaatgattactatgcagactactatgcaaacccatataattatggagatcca
agtcgctgggaacgttacccatcagcatatgactccagatatagagatcccagaagttat
gaccagagatactggtatgacactgaacagaatccataccaaaagagagaggcatatcca
tatgataacagacaagaccgatatgaagatcactggcgatatgatcctcgctttgctgga
agctttgatgatgaaactgagcctcacagagacccttatggtgatgaatttgacagacga
agtgtccacagtgaacattctgcccatagtctccgtagttcccacagtgttcatagccat
cagagcagcttcagttctcgctctcagcaaagccagctttatagaagcaaccatgatctg
acggctaatgcatatgaaaccaccacccagccagtctcacttcacacagattatccatac
agcggataccctgctaattttgatggtcaacagccttttacagattatggctactcagct
gaaactggatggccatctgtagaacaagtcccatcaagaccctcaacacctgagaaattt
ttagtgcctcatgtctgtgcaaggtttggtcctgggggccatctgacaaaagtgctgtca
aacctgccttcagaaggacagccggctttggttgagatacacagtatggagactatgttg
caacatatgccagaacaagaagagatgagagcctttccgggccctcttgctaaagatgat
acccataaagtggatgtcattaattttgcacaaaacaaagccacacagtgctttcagaat
gaaaatctaattgacaaagagtctgcaagcctgctttgggattttattgtattgttgtgc
agacagaatgggaccgtagtgggcacagacattgcagagcttttgctacgggatcacaaa
acagtctggcttcctgggaaatcgcccaatgaagcaaacttgattgacttcactaatgag
gctttggagcaagtggaagaggagtctggtgaagctcaactctcatttctcaccgatagt
cttataaccacaattgacagtcttgaaagagagacagagagattcagggaacttctgctt
tatggtcgtaagaaggatgctttggagtctgccatgaagcatggattatggggtcatgct
ctgcttcttgccagtaaaatggacagcagaacacatgcaagagtcatgaccagatttgcc
aacagtcttccaattaatgatcccctgcaaactgtttaccagctaatgtctggaagaatg
ccagcagcatccacatgctgtggagatgagaaatggggagactggaggcctcatctggct
atggtgctatccaacttgaccaataacatggatgtggaatcaaggactattaccaccatg
ggagatactcttgcttctaaaggccttttagatgctgctcatttttgctacctgatggcc
cagatcgggtttggcgtttatacaaagaaaacaacgaagcttgtcctaattggatcaaat
cacagcttgccatttttaaagtttgccaccaatgaagccattcaaagaacggaatcctat
gaatatgcacagtcactgggaacgcagccctgctgtttacccaatttccaggttttcaaa
ttcatctatgcttgccgactagctgagatgggacttgctgcacaagcgtttcattattgt
gaagtgatttccaaaaccgttcttaaaaatccctactattattcgcctgtgcttatcggc
caacttattcagatatcatctcagttgcgcctgttcgacccacagattaaagagaaacca
gagcaggaattatttattgaaccttcatggttggtacgacttcggcacttggatggacag
atcaaggatggtacgatagcttacaatgcagatagatccacccctcagcagtatgcctgt
agcacaccaagctctgaattagaccatatcagtcagtgtgatggaacaggatctggacag
gaaatggggcctgctactgaaaacccattgttggcatccttgttacctaatacggtgtac
cccatgcaaggtgtgcagctaatgccttcagcccctcagactatccttgaggaatcagca
gctgtgactcctcctattcagcaagaaactgttggtgttcctttctatcctgtagcccct
ccctctattgggccagggtctggctttgcaccaccaggctttccaaatcaatatggagct
gaacagtcttcactgtacctgggatctacaatgccaccgggaggaccacctccgcaagca
gcagaaccacggccagaagagcagttaaaccaggaaacagcaatgcagagaattccccag
gaatctccaattcaaaaaactttccctgaacaaagagaggaggatttctatggaaaaatg
gcaaacatggcaccgggacgaagatccagatccacctctcagtcttcagcacatatgggc
tatgggcgaagatctcggaccacctcagaatcctccacccattctataggacgagaaaga
tgcaactctgcagcaaagcagccctctcctcctcctccatccattcctgaagggaaagag
accaacaaagagatcaagaaggagccagcagcgagaaagagtggtgcaaattggtttcgc
tggctgatgggaaaaggaaagaatgaagctcaccttccagatgataagaacaaatcaatt
gtttgggatgaaaagaaacagcgctgggttaatttagacgagccagaagaggagagcaag
ccactgccaccacctccagccggggttcctaaagctcctcagactgctccacctgggccc
gggggtccacctggtgtcaacatgttttccagaaaagcagcaggaaccagagctcgttac
gttgacattctaaacccaagtggagcgaaatgcagtggtgctgttcctgccccatcagac
ctctttgcccccttggcaccaatgcctatccctgcaaacttgtttgttccaaactcagtt
cctgaggaacagcaacctatggaagggagcggggcacgagaacagacattctctgcaaat
caagtcagcgctgatgttactacagaaccacagtatttaaactctacaatgcttccacct
ggttctgaactccctgggtccaatccagatggctcccattcaggagagctttcgcgctct
agttcaatgagttcattatcacgtgaagtaagccagcattttaatcagcctctccgtagt
gtgccaccttctgggggacctccagcaggaactgttcagttctacaacccttctcaattt
gcacaatctcctgcaactactggaagttcaaggctggggagaattggacagagaaaatac
ccaacattgaaatag
DBGET
integrated database retrieval system
