KEGG   Caretta caretta (Loggerhead turtle): 125626342
Entry
125626342         CDS       T09292                                 
Name
(RefSeq) interleukin-1 beta-like isoform X1
  KO
K04519  interleukin 1 beta
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04010  MAPK signaling pathway
ccay04060  Cytokine-cytokine receptor interaction
ccay04217  Necroptosis
ccay04620  Toll-like receptor signaling pathway
ccay04621  NOD-like receptor signaling pathway
ccay04623  Cytosolic DNA-sensing pathway
ccay04625  C-type lectin receptor signaling pathway
ccay05132  Salmonella infection
ccay05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125626342
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    125626342
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    125626342
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    125626342
   04621 NOD-like receptor signaling pathway
    125626342
   04623 Cytosolic DNA-sensing pathway
    125626342
   04625 C-type lectin receptor signaling pathway
    125626342
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    125626342
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125626342
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ccay04052]
    125626342
   00536 Glycosaminoglycan binding proteins [BR:ccay00536]
    125626342
Cytokines and neuropeptides [BR:ccay04052]
 Cytokines
  Interleukins
   125626342
Glycosaminoglycan binding proteins [BR:ccay00536]
 Heparan sulfate / Heparin
  Cytokines
   125626342
SSDB
Motif
Pfam: IL1 IL1_propep
Other DBs
NCBI-GeneID: 125626342
NCBI-ProteinID: XP_048685121
EnsemblRapid: ENSCECG00000005116
LinkDB
Position
23:complement(16310121..16327577)
AA seq 344 aa
MSPYLWGSSQLNHTFFLFCPLYHAPPSATRNQSTLRHSKRETEISPPGSRKGQRHASHRF
HKREAAMAAVPDVQEELMEFCSVNDEQFYEVDHRYLGKSSNQGSSPCSLSQSCSACSLGI
QLQFTEQTSPKVFRRSVVLVIATEKMKKALKARPFTDDDLTGIFDTVFETISFESHNVTH
TVDSIYRYFRSISYEIRDTDQKCFKLEAPAQLVAMHLQGPSIRHQVKLNMALYRPKSGTS
NQSSMRFPVALGIKGRSLYLSCVQNGQQPVLQLEEADILKDVDGAELERFIFYKVENEST
AQFESAAHRGWYICTSPQNNQPVGITNRLGEVFITNYFLTQSKH
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtccccatatctctggggaagttcccagctaaaccacaccttcttcctcttctgccct
ctatatcatgctcctccatcagctacaaggaaccagtcaacactgagacactcaaagaga
gagacagagatcagtcctccaggaagtaggaagggccagcggcacgcatcacacaggttt
cataagcgagaagcagctatggcagccgttcctgatgtacaggaggagttgatggagttc
tgcagtgtgaacgatgaacagttctacgaagtcgaccaccgctacttggggaagagctcc
aaccaaggctcgagcccctgctccctgtcccagagctgctcagcctgcagcctgggcatc
cagttgcagttcacagagcagacctctcccaaggtcttccgcagatccgtggtgctggtg
atcgccacagagaagatgaagaaggcattgaaagcaagaccattcacggacgatgatttg
acgggcatcttcgatactgtcttcgagaccatctcgttcgagagtcacaatgtcacccac
acggtggattccatctaccgctacttcagatccatctcttacgaaattcgggacactgac
cagaagtgcttcaagctggaggctcccgcccagctggtggcgatgcatttgcaaggcccc
agcatcagacaccaagtgaagttaaacatggctctctatagaccgaaaagcggcacaagc
aaccagagctccatgaggtttccggtcgctctgggcatcaaggggagaagtctctacctg
tcctgtgtgcaaaatggccagcagccggtgctgcaactggaggaggccgatatcctgaag
gatgttgacggagccgagctggagcgcttcatcttctacaaggtagaaaacgagagcacg
gcccagttcgagtcagccgcccaccgcggctggtacatctgcacctctccccagaacaac
cagcccgttggcatcaccaaccggcttggggaagtgttcatcaccaactacttcctcacc
cagtccaagcactga

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