Caretta caretta (Loggerhead turtle): 125636408
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Entry
125636408 CDS
T09292
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00310
Lysine degradation
ccay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125636408 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125636408 (PRDM6)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125636408 (PRDM6)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
125636408 (PRDM6)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125636408 (PRDM6)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125636408 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
125636408
NCBI-ProteinID:
XP_048705380
EnsemblRapid:
ENSCECG00000012388
LinkDB
All DBs
Position
5:77169487..77267131
Genome browser
AA seq
569 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALTQLPPPPERADPSADSLRQRP
ASLSSASSSSSSSTPSSSTSSCAAAAAASLAGLTSISVAQIPAFGPLPSSEAPSGAPASL
QSKDLCGGGAKCSERAAPRFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNR
NGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQ
RIQQGTWIGPFQGVVLLPEKVQMGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYI
RCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLN
VPSTVMEAMSRPDTLQPFNKSSKLPPATPQRSIVFPQTPCSRNFSLLDKSGPIESGFNQI
SVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHC
SQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSF
TQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcccggcgacccaggcggatctgctttcctgaaggtggatcccgcctatctc
cagcactggcagcagctgttcccgcagagcagccagctcaagagcagcggggccctcacc
cagctcccgccgccgcccgagagagcggatccctcggctgacagcctccgccagcgccca
gcctctctctcctccgcttcctcttcctcctcttcgtccaccccatcttcttccacctcc
tcgtgcgccgccgccgccgccgcttccctggccgggctgacctcgatctctgtggcccag
attcccgcctttgggccgctaccgagctccgaggccccctccggagccccggcctccctg
cagagcaaagacttgtgcggcgggggcgccaagtgcagcgagcgggctgcgcccaggttt
cgatgtacggcagaggagctggactattacctgtatggacagcaacgcatggagatcatc
cccctgaaccagcacaccagtgaccccaacaaccgatgtgacatgtgtgctgataaccgc
aatggtgagtgccccatgcatgggccacttcactctctgcgccgcctagtgggcactagt
agtgctgcagccgcagcacctccacctgagatccctgaatggctcagggacctcccccgg
gaagtgtgtctatgtaccagtactgtacctggtctggcctatggcatctgcgctgcgcag
aggatccagcagggcacctggattgggcctttccagggagttgtccttctgccagagaag
gttcaaatgggagccatcaggaacacgcagcacctctgggaaatatatgaccaagatggg
acactacagcactttattgatggcggggaacccagtaagtcaagttggatgaggtatatc
cgatgtgcaaggcactgtggggaacagaatctaacagtagttcagtacaggtcaaatata
ttctacagggcctgtatagatatccccagaggcactgaactgctggtgtggtacaatgac
agctacacatctttctttggaatccctttgcagtgtattgcacaggacgaaaatttgaat
gtcccttcaactgtaatggaggccatgtccagaccagacactctacagccatttaacaaa
agtagcaaactgccccctgccactccacagcgatccatagtatttccacagactccgtgt
agcagaaatttttctcttctggataagtctgggcccatcgagtcaggatttaaccagatc
agtgtcaaaaaccaacgagttcttgcaagcccaacgtcaacgagccaactaaattctgag
ttcagtgactggcacctttggaaatgtgggcaatgctttaagactttcacccagcggatc
ctcttacagatgcatgtgtgtacacagaaccctgacagaccctatcagtgtggccactgc
tcccaatctttctcccaaccttcggaactaaggaaccatgtagtcacccattccagtgac
agacctttcaagtgcggctattgcggccgtgcctttgctggtgctacaacactcaacaat
catatccggacgcatacgggggaaaaaccctttaagtgcgagaggtgtgagaggagcttc
acacaagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataaca
gaaagcacagaatcaattgaagtggattaa
DBGET
integrated database retrieval system
