Caretta caretta (Loggerhead turtle): 125636482
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Entry
125636482 CDS
T09292
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125636482 (DENND4C)
Membrane trafficking [BR:
ccay04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125636482 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
125636482
NCBI-ProteinID:
XP_048705571
EnsemblRapid:
ENSCECG00000013633
LinkDB
All DBs
Position
5:105385870..105503779
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AA seq
1952 aa
AA seq
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MIEDKGPRVADYFVVAGLTDTSTSLDQEVNRFETKSVGPKAPITDLAVIIKSAGETVPEG
YTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDVGVLYEGKERVILGCEVIQA
TPYGRCANVNNSSATSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVYLCYKKSMPASNSIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQHMQLGLLTAVERK
VVTSKSINSNTCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPS
PQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKILL
HSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPVPFIVGVDSRYFDLYDP
PQDVVCIDLDTNMVYLSDDKKSMNWKQLPKKPCKSLLSTLRKLHPQLASVHRKTQDGSAV
EMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKTTAADSLFD
LQGFLKSRDRAYTKFYMLLTKTQIFSRFIEECSFVSDKDTSLAFFDDCIEKLFPDKGTEK
GEKVDVDSAEDTRLIELDESQKSEHTVFIMPPEPPPDDGQARAPKYSYKNFPRLDFELFD
RPQELKLSFNRHPAGGNISNSPALMAKRTKQEIKTAHKLAKKYYTNPPLWAKCLFSHCYS
LWFICLPAYIRVSHPKVKALQQAYDILIKMRKTEVEPLDEVCYRVVMQLCGLCGHPVQAV
RVLFEMKNAGVQPNAITYGYYNKAVLESHWPSSNRSGIFLWTKVQNVVRGVAQFRQCLKK
ATRSSQVSVISAPRNATGGSDGDTVSHGSVDSSNDANSGEHTLFVRDLVRLDSIDNHSST
GGQSDQGYGSKDELIRDDGDNLLAAETLAEKASSCKMEDLTGEVGGTGEKHQQSAEPHSS
AEPPVWGSSIVKVPSGIFDSTGRKNSSGTASSPLFITQDPVEDSVFNDASPKKTGEKGQK
RQKLFSERSCSFSTESRAGMLLKKGSLDLSSSEIAIMMGADAKILTAALSGAKTSPPHTS
KSSSFGSMGDQQVSGRSGTRTHVSEGAEELEHKSSSVLEEPEEGQEHLENGGEHSAAKAE
NIHAKLLDGDQPPNQKTDARDAVTKRNSFYGVIKPVEREDVEVGLDPLSLLATESIEPKP
PEPEEKIVSPVVARNLADEIESYMNLKSPLGSKSSSMELHKQENGEATASSTLDRSLERR
SSLPTDSVPPAPEKSENRKSPLVSRSKTFTGRPKQQTHSRVQKERPSSLSVLGRSSQHGS
LGSVVTSLSNLKLDNILSGPKIDVLKSGVKQAVNVANRMWGAVTSQYNYSDDEAKTHRPD
FTFPAGFEDRILGDSLLPKPGIPGLVTSELTQSTTSLGSSNSSGDVGKQHYTTGEVSFPR
SMKGLDSEKSEHGSSHNTSLSSIFQNCAMEVLMSSCSQCRVCGALVYDEEIMAGWAADDS
NLNTTCPFCKSTFLPLLNVEFKDLRGCASFFLKQSTSGDSLHSGNIPLTTDPLEQKPVSS
PAVADLISFSDHPKPNQTIAEETSSATEQSDVPEEQSEGPRALKKSVINSSKRGASLTRS
HSVGGPLQNIDLTHRPSHGISTVSLPNSLQEVVDPLRKRPNPLPLSVPYLSPLVLRKELE
SLLENEGEQVIHTSTFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLSS
LSQDSKLVYIQLLWDNINLHQEPGESLYISWRNLNLAEKKSSIASEDQQATSTLVENIKL
SIQHNNVVEPIKLLLRKVKPDVKRQRSFYREILFLSLVSLGRENIDIEAFDSEYRLAYKS
LTTEVLEKMQKIDAPPSSSVEWCRKCFGAPVI
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccaagagtggccgactactttgtagtggcaggactcactgat
acttctacctctctggaccaagaagtaaaccgatttgaaacaaagtcagttggtccaaag
gctccaattacagacctagctgtcatcatcaagtcagctggtgaaacagtgcctgagggt
tacacctgtgttgaagccacccccacggcccttcaagccaacttgaactatgggagtctt
aaaagtccagagctttttctttgctacaagaggggccgggacaaaccaccgcttactgac
gttggagttctatacgaagggaaggaacgtgtaattttaggctgtgaggtgatccaagct
actccctacggtcgttgtgccaatgttaacaacagttcagctacttcccaacgaatcttt
attacctatcgaagggctcctccagtacggcctcagaattccttggctgtaacagatatc
tgtgttattgttaccagcaaaggagaaacgcctccccatacattctgcaaagttgataag
aacttaaattgtggcatgtgggggtccagtgtgtacctctgttataagaagtctatgccg
gcttctaactcaatagcatataaagctggcttaattttcagatatccagaggacgattat
gagtcattcccattgtcagaatctgtacctcttttctgccttcctatgggagccactatt
gaatgctgggatcctcaaaccaaatacccattaccagtgttttcaacatttgtcctgact
ggttcttctgcagaaaaggtgtacggtgctgctattcaattttatgagccttattcccgg
gagctgctaacagaaaagcagcatatgcagctgggtctcctgacagctgtggagcgaaaa
gtggttacttccaaatccatcaattccaacacatgcatctgccttctctctcactggcct
ttctttgaagcctttcggaaatttcttatgttcatctacaagctctctgtctctgggcct
catcctcttcccattgaaaagcacatatcccatttcatgcacaatatacctttcccttca
cctcaaagaccaagaatccttgtacagctttctgcccatgatgcattaatattgtctcaa
ccagtttctacacccttgccactcagtggagcaaacttcagtactttgctgatgaatctt
ggaccagaaaactgtgctactttgttactctttgtattgctagagggcaagatcctgctg
cactctctgagaccagctgtactgactggagtagctgaagctgtagtcgctatgatattt
ccatttcaatggcagtgtccatacatccccctgtgtcctttgtctctggcagcagtgctc
agtgctcctgttccatttatagttggagttgattcacgatactttgatctgtatgatcca
ccacaggatgttgtttgcattgacttagacacaaacatggtatacctatcggatgataag
aagagcatgaactggaaacagcttcctaagaagccatgcaaaagtctactcagcacctta
aggaaattgcatccacagctggcatcagttcacagaaagacccaagacggctctgcagtg
gagatgacgcctatagaggcagatttctcttggcagaagaagatgacagaacttgagatg
gagatccaagaggcttttctgcgcttcatggcgtctattttaaaggggtacagaacattc
ctcaagccaattactcaggcaccttcaaataaaactactgctgctgattccttgtttgac
cttcaaggatttttaaaaagtagagaccgtgcctacacaaagttctacatgcttctaacc
aaaacacagatatttagccgcttcatagaagagtgcagttttgtgagtgacaaggatacc
agcctggcattttttgatgactgtatagaaaagctttttcctgataaaggaacagaaaag
ggagagaaggttgatgtagattctgcagaagatacacggttaattgagcttgatgagtca
cagaagagtgaacacacagtgtttataatgccaccagaacctccccctgatgatggacag
gcccgagcacctaagtacagctataaaaacttcccaagactagattttgagctcttcgac
aggccacaggagctcaagctttcgttcaacaggcacccagctggagggaacatttcaaat
agtccagcactcatggcaaagaggacaaaacaggagataaaaacagcccataaattagcc
aaaaagtattacacaaacccaccactgtgggctaagtgcctcttcagtcactgttatagt
ctatggttcatttgtctgccagcctacatcagagtttcccatcccaaagtcaaagctctg
caacaggcatatgacattcttattaaaatgaggaaaacggaagtggaaccactagatgag
gtgtgctatagagttgtaatgcagctctgcggactttgtggtcatcctgttcaggctgtg
agagtcctatttgaaatgaaaaatgctggagtacagccaaatgcgatcacctatggttat
tacaacaaggcagttttggagagtcattggcctagcagtaaccgcagtggtatctttctg
tggacgaaggtacagaatgtggtccgtggtgtagcacaatttcggcaatgcctaaaaaaa
gcaacaaggagctcacaggtgtctgtgatatcagctcctcggaatgccacgggtggaagt
gatggggacacggtgagccatggtagcgtggatagctctaatgatgctaacagtggggag
cacacactcttcgtcagagacttagtcaggcttgattccattgataatcactctagcaca
gggggtcaatcagaccaaggctatggatccaaggatgaactcataagggatgatggagat
aatcttcttgcagctgagacactagcagaaaaagcttcttcttgtaaaatggaagaccta
acaggagaggttggtggtactggtgaaaagcatcagcagagtgcagaacctcacagttca
gcagaaccacctgtgtggggaagcagtattgtgaaagttccatctggcatttttgatagc
actggcaggaaaaacagcagtggaactgcatctagcccactctttataactcaggatcca
gttgaagattcagtctttaatgatgcttctcccaagaaaacaggtgaaaaagggcagaag
agacaaaagctcttttcagagaggagctgcagttttagcactgaaagcagagcaggtatg
ctgctgaagaaaggcagtttggacttgagctctagtgaaatagcgataatgatgggagca
gatgccaagatcctcacagcagctttatccggggccaaaacttcaccccctcacactagt
aaatccagtagctttggcagtatgggtgaccagcaggtctctgggcggagtggcaccagg
actcatgtgagcgaaggtgctgaggaactagagcataagtcgtcttcagtgctggaggag
cctgaggaagggcaagagcaccttgagaatggaggtgagcacagtgcagccaaagcagag
aacattcacgccaaacttctggatggtgatcagcccccaaaccagaaaacagatgccaga
gatgcagtgactaaaaggaatagcttctatggagtgattaagcctgttgaaagggaagat
gttgaagtgggcttggaccctttatctttgctggctactgagagtatagaaccaaaaccc
ccagagcctgaagaaaagattgtgtcaccagttgtagcacgtaatctggcagatgaaatc
gaaagctatatgaatctaaagagccccctgggtagcaagtcttccagcatggagctccac
aagcaagagaacggagaggcaacagcctctagtacacttgatcgctccctagagaggaga
tcaagcctacctacagattctgtcccaccagccccagagaagagtgaaaatcggaaaagt
cctttagtttccaggtctaaaacctttacagggcgaccaaagcaacaaacccattcacga
gtccaaaaggagaggccttcatcattatcggtgttgggtcgctcttcacagcatggctca
ctggggtctgtggtaacaagtttatccaatctgaagctggacaatatactctctggaccg
aaaatagatgttctgaagtctggagtgaaacaagcagttaatgtagccaataggatgtgg
ggtgctgtaacctcacaatataactactcggatgatgaggcaaaaacccatcgaccagac
ttcacctttcctgctggttttgaagatcgtattttaggagacagtctgttaccaaaacca
ggaatccctgggttggtaaccagtgaactcacacaaagcactaccagtcttggcagcagc
aacagcagcggagatgtaggaaaacagcactacacaacaggtgaggtttcattcccgaga
agtatgaaaggtctggactctgagaagtcagaacatggatcctcccacaatactagtttg
tccagcatcttccagaactgtgcaatggaggtcttgatgtcaagctgttctcagtgcaga
gtttgcggtgcattggtttatgatgaagaaattatggctggatgggctgcagatgactct
aacttgaacaccacatgtccattttgtaaaagtaccttcttacctcttcttaatgtggaa
tttaaagacttgcgtggatgtgcgagcttttttctgaaacaaagtacatctggagatagt
ttacatagtggaaacattccattaaccacggatcctctggagcagaaacctgtgtccagt
cctgctgttgctgatttgatcagtttttcagatcacccaaagcccaaccagaccatagct
gaagaaaccagctctgcaactgagcaaagtgatgtgccagaagaacagagtgaaggcccc
agggctctgaagaagtctgttatcaattcatcaaaacgaggagcatctttgactcggagc
catagtgtcggaggccctctgcaaaatattgatctcacacacagaccatctcatggcatt
tcaacagttagtcttccaaatagcttgcaagaagttgtggatcctttacggaaaaggccc
aatccgctccctctgtctgtaccatatttgagccctctggtgctacgtaaagagctcgaa
tccttgttagagaatgagggggaacaagtgattcacacatccacatttatcaaccaacat
cccatcattttctggaacctagtttggtatttccggcgcttggatctacctagcaacttg
ccaggactcattctgacatcggaacactgtaatgacggggtgcagcttcctttgtcatct
ctgtctcaagacagtaagttagtatacatccagctactgtgggacaacatcaaccttcac
caagagcctggagagtctctatatatatcttggagaaatctcaatttagcagagaagaaa
tcatccatagcttcagaagatcagcaggcaacaagcactttagtggagaacatcaaactg
agcattcaacacaacaatgttgttgaacccatcaaactccttctgcggaaagttaaacca
gatgtcaaacgacaaaggagtttttatagagaaatccttttcctgtctttggtgtctctt
gggagagagaacattgacattgaggcctttgacagtgagtacagacttgcatataaaagt
ctaacgacagaggtgcttgagaagatgcagaaaatagatgcaccgccaagcagcagtgtg
gagtggtgcagaaaatgctttggagcacctgtcatataa
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integrated database retrieval system
