Caretta caretta (Loggerhead turtle): 125638214
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Entry
125638214 CDS
T09292
Symbol
FANCM
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group M protein
KO
K10896
fanconi anemia group M protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125638214 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125638214 (FANCM)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
125638214 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
ResIII
Helicase_C
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
125638214
NCBI-ProteinID:
XP_048709624
EnsemblRapid:
ENSCECG00000005879
LinkDB
All DBs
Position
6:complement(124641890..124787510)
Genome browser
AA seq
2172 aa
AA seq
DB search
MTTFPSMPQRLSRQRAALNDYTSQRAAGAGLTRQRSERGEVFRRSRRAAAPRWRRGRRRA
GAEGGAGRSPPSMSGGGGGQRTLFQSWGAGVSRAPGAPSAPRREAAAGPAPGPGPGPEAA
AAAGDDDLLLAAAAAEAERGPGAGAGGGGGGGFCAAAGSLWVYPTNWPVRGYQERMARAA
LLANTLVCLPTGLGKTFVAAVVMYNFYRWFPSAKVLFLAPTRPLVAQQMEACARVMGIPP
HHMAEMTGGTQVLNRKEIWHNKRVFFLTPQVMVNDLSRGTCPAAEIKCLVIDEAHKALGN
YAYCQVVKELSKYTNQFRILALTATPGSDTKAVQEVISNLLIAQIELCSEDSPDIQPYSH
ERQVEKFVVPLGKELAEIQNAYIRVLETFAGRLIKIRVLAQRDIPSLTKYQIILARDQFR
KNPSSRNAGIQQGVIEGDFALCISLYHGYELLLQMGTRSLFIFLCGIMDGSKGLTRARNE
LSRNEDFIKLYRQLENMFSDTSVTSANGNFLYNNRTGPANKNKIIYSHPKLKKLEEVVVE
HFKSWKGCTDQSMSESKPSDTRVMIFSSFRDSVQEIAEILSQHEPIVRVMTFVGHSTGKS
MKGFTQKDQLEVVKCFREGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGR
TGRKRKGRIVVILAEGREQRTYNQSQSNKKSIYKAISENKMLHFYQQSPRLIPEGINPKL
HKMFITPAIYEPNNSRSLSKERKSSSLQHKSALFSMGTSTKQTDSRENWFLTSEEFEVWN
SLYKLKESDGVKEPILSQSHFETLENMEEIAASRVEGAHELSLSEWRLWQNRPFPTYLVD
HSDRCYHFIRVMEMIELMRHEEGDCSYELEIQPYLNMDDIKTSNAQRSRCLSTSNSKAQK
AFSSRKNVAQGSKVKLGSCSLSELDTECISLFKTTNFKTTKRTSALNLKMPSASTEVNIL
DSFSTAEDAVSECTVHKSLPDNRENVTFHLNEFTAPSDLSGNVTSCANEIVKECKSVNQT
CSSLNRNCADSGYSSFTEEKSPVSPSLFYLPEAELDSFALTTPTEDPSLIKIILTNVKRL
LSQSPPPLNKLQNCEGLDRTRDDEIQQPVPFQKVISNTFTEGLQGKTSVSFTEFQNLSLP
TQKCSELNAPSKLCSSISNCPSEPSFLSEAFVGKTNNGLNWDDIFDSDNGEHTEIQKDNL
TMVDHALANSPSDRNSVDGYKMDSEKFQENVATDRDESINLFEDEHFSDANNASLSKYNC
SKLLMSSDLYDKDAPSAGQISEGHISDECFLDSDTNPRESLISCRTRNLKIPEHLDIVNK
QFLDNEDLYDCSQELFSVNFDLGFSIQESEDEQIDMNGSQNSDSILGTHVDIKPTRGENE
LSNDNLRHPSPPKLKDESIGRTNFSTPLPSQNQRTNQAKLTENCISIISPMKLTEEKEHG
SYDSLASAFSTPKGRKVRNVKVLKSISMNAFSRIRQEIPQILHTNKVNTNTVKVVLNSAF
DTPDLPSGKTENLDHRQLHVSRKFPIEVESSSESEEEIVFQRKNKKKGNVLKSPDVKNNS
DFESPVHAVKKRRHPLNTSDVSSDEGMDFHKKSNRTVDCDMSRYRKQLKGVKRQKSDDNF
FMFKSAARQFLDEEAELSLQEAEAISSDESDSENEQNSSLNQFLNDETQFTEVLNDSEME
GVYLKSVRSPALGNRYKMVHKGFNSMAVFSQIPEQDEAYLADSFCVEEEEEENLRKSDAS
EEEEVCVNFDLVMDERSASGRKQYLTRRRVKLNQAKTEQNCAVPLTKKRSRIIVLDDSSG
DETNVSNQRPVKTASPRRDYSHAHIPKSLLSDSPGQPKAPARKNSIHQPLENKDQRLINL
KASVSEVLDFQPESRGRGRPSSLAIANNDLLRRDGDFQAKLKVEGSSKNLCANTSDTWCS
GSKGNSAAAPPVSAGLLERKASLCILVDSREISSGSEIISSLKAVHGVKVQVCSLGGCDY
IVSNRMAVERRTQSELLNSMNRNKVTQRIQHLQSMFERICVIVEKDRIKAGETSRLFQRT
KYYDAMLSALIRAGIRILFSSCQEESAHLLKDLALVEQRKNVAIHVPTEVKGAKQEALRF
YLSIPNISYVAALNMCHGFDSVKKMANSCPKDIATCAQVSQQKAEEIYRYIRSGFDLQML
PEKLHTKGKSNT
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgactacatttcccagcatgccgcagcgcctctcgcggcagagagcggccctgaatgac
tacacttcccagcgtgctgcgggggccggcctcacgcggcagcgctcggagcgtggcgag
gtgttccggcgctcccggagagccgccgccccaagatggcggcgggggcgccggcgggcg
ggcgctgagggaggggccggccgttccccaccgagcatgagcggcggcggcggcgggcag
aggacgctgttccagagctggggggctggcgtcagccgcgccccgggggccccctcagcc
cctcggcgggaggcggctgccggtcccgcgcctgggcccgggcccggccccgaggcggcg
gcggcggcgggggacgatgacttgctgctggcggcggcggcggccgaggccgagcggggc
ccgggcgcgggggcgggcggcggcggcggcggcgggttctgcgcggcggcgggctcgctg
tgggtctaccccaccaactggccggtgcgcggctaccaggagcgcatggcgcgggcggcg
ctgctggccaacacgctggtctgcctgcccaccgggctgggcaagaccttcgtggccgcc
gtggtcatgtacaacttctaccgctggttcccctccgccaaggtgctcttcctggcgccc
accaggccgctggtggcgcagcagatggaggcctgcgcccgcgtcatgggcatccctccg
caccacatggccgagatgacagggggtacccaggttctcaatcggaaggaaatctggcac
aataagagggtcttttttcttactcctcaagtaatggtaaatgatctttctcgtggaacc
tgtcctgcagcagaaataaaatgtctggttattgatgaagcccacaaagctcttggaaac
tacgcctactgccaggttgtgaaggaactgagcaaatacacaaaccaatttagaatcttg
gctctaactgccacaccaggcagtgacacaaaggctgtacaggaagttatttccaaccta
ttgatagcacagatagagctgtgttctgaagattccccagatattcagccttactctcat
gagcggcaagttgaaaaatttgttgttccacttggtaaagaactagcagaaattcagaat
gcttacatcagggttttggaaacatttgctggccgcctgattaaaattcgagttttggca
cagcgtgatattcccagccttacaaagtaccagataattctagcaagagatcagtttcgg
aaaaacccttcttcacgcaatgcggggatacaacagggcgtaattgaaggagattttgct
ctttgcattagtttgtatcatggttatgaactactcctgcagatgggaacacgatcatta
tttatcttcctgtgtggaattatggatggatcaaaaggcttgactcgtgccaggaatgaa
cttagccggaatgaggacttcataaaattgtatcggcaacttgaaaacatgttttcagac
acatctgtgacttcagcaaatggaaattttctttacaacaatagaacaggacctgcaaat
aaaaataaaatcatctacagtcatccaaaattaaagaaattagaagaggttgtagtagaa
cacttcaaatcctggaagggatgtacagatcaaagcatgtctgaaagcaaacccagtgat
accagagttatgatcttctcctcatttcgagacagcgtccaagaaattgctgaaatactt
tcccagcacgagccaattgtcagagtaatgaccttcgttggccactccacaggaaagagc
atgaagggctttacacaaaaagatcagcttgaggtggtaaaatgctttcgtgaaggtggc
tataatacactggtctctacatgtgtaggagaagaagggttagatattggagaagttgac
ctcataatctgttttgatgcccaaaaaagtccaattcgtcttgtgcagcgaatgggtcga
actgggcgcaagcggaaaggcagaattgttgtcatacttgcagaaggacgggaacaacgg
acttacaatcaaagccagtccaacaaaaagagcatttacaaagcaatttcggaaaacaaa
atgcttcacttttaccagcaaagccctcgtctgattcctgaaggaataaacccaaagttg
cacaaaatgtttatcactcctgcaatatatgaaccaaataattcaagatcactttccaaa
gagagaaaatccagctccctccagcataaatccgctctcttttccatgggcacaagcaca
aagcaaacagactctcgtgaaaattggttcctaacatcagaggaatttgaagtatggaac
agcttatacaaactaaaagaaagtgatggagtcaaagaaccaatattgtctcaaagtcac
tttgaaactttagaaaatatggaggaaatagcagcatctcgagtggaaggagctcatgaa
ctttccctatctgagtggagactttggcagaatcgtccctttcctacctatctggttgac
cactcggatcgttgctaccattttattagagttatggaaatgatagaactgatgagacat
gaagagggagactgcagctatgaactggaaattcagccttatttaaatatggacgatatt
aaaacctcaaatgctcaaaggagtagatgtctttccaccagcaactccaaggctcagaag
gcattttcatccagaaaaaacgtggcacaaggatcaaaagtaaaacttggttcatgttcc
ttaagtgaacttgatacagaatgtatttcactgtttaaaacaaccaacttcaagaccact
aaaagaacatctgcattaaatttgaaaatgccttcagcaagtacagaagttaacatttta
gattctttttcaactgcagaggacgctgtttctgaatgtactgtacataaaagtctacca
gataacagagaaaatgtgacatttcacttaaatgaatttactgccccaagtgatctcagt
ggaaatgttaccagttgtgcaaatgaaatagtaaaggaatgtaaatctgtaaatcaaacc
tgtagttcactgaacagaaactgtgcagattctggttacagtagcttcacagaggagaaa
tcaccagtttcacctagcttgttttacctacctgaagcagagttggattcatttgcactc
acaactccaactgaggatccttcattgataaaaataatattaacaaatgtaaaaaggctt
ttgtcacagtctcctccacctttgaataaactccaaaattgtgaaggattggacagaacc
agagacgatgaaatccaacaacctgttccttttcaaaaagttatttccaacacattcaca
gagggattgcagggtaaaacctctgtctctttcacagagttccagaatctatcacttccc
actcagaaatgctcagaattaaatgcccccagtaaattgtgttcctctataagtaactgt
ccttcagaaccaagcttcctttctgaggcttttgttggcaagacaaataatggtcttaac
tgggacgacatctttgactctgataatggagagcacacagaaattcaaaaggacaatcta
acaatggtagatcatgctctggcaaatagcccttcagacagaaattcagttgacgggtat
aaaatggattctgaaaagttccaggaaaatgtggccactgacagagatgagagcataaat
ttatttgaagatgaacatttttctgatgctaacaatgcaagcctttctaagtacaattgc
agtaaacttttgatgtcatcagatttgtatgataaagatgcaccaagtgctggacaaatt
tctgaagggcatatttcagatgagtgctttctagacagtgatacaaaccccagagaatca
ctaataagctgtaggaccagaaatttgaaaatacctgaacatttggatattgtaaacaaa
caatttctggataatgaagatctttatgactgttctcaggaactgttctccgttaacttt
gatctggggttttctattcaagagtctgaggatgaacaaatagacatgaatggtagtcaa
aattcagatagtatcttgggcactcatgtcgatattaaacctactagaggtgaaaatgag
ttatcaaatgataacttaagacatccatctccaccaaaattgaaagatgaaagcattgga
agaacaaacttttctacaccattgccctcacaaaatcagagaacgaatcaagcaaaactg
actgaaaactgtatctcaatcatttctcctatgaagctaacagaagaaaaggaacatgga
tcatatgactctttagcttctgcattttccacaccaaaaggtagaaaggttaggaatgtt
aaagtcctcaaaagcatttctatgaatgctttttctagaatcaggcaggaaattccccag
attttgcatacaaataaagtaaataccaacactgttaaagttgtgctaaattcagctttt
gatacaccagacctcccctcaggaaagactgaaaacctggaccatagacagctgcatgtt
tcccggaagtttcctattgaagtagaaagtagcagcgaaagtgaagaagagattgttttc
caaaggaaaaataagaaaaaaggaaatgttttgaagtctcctgatgttaagaataacagc
gattttgaatcaccagttcatgctgtcaagaagcgtaggcatccacttaacacatcagac
gtatctagtgatgagggcatggattttcacaagaaatcaaacaggactgtggattgcgac
atgagccgttacaggaaacaactaaaaggtgtcaaaaggcaaaagagtgatgacaacttt
tttatgttcaagagtgcagccagacaatttttagatgaagaagctgaactttccctacaa
gaggcagaggctatttcatctgatgagagtgattcagagaacgaacaaaactcctcactc
aatcaattccttaatgatgagacacagttcacagaggttttaaatgattctgagatggaa
ggagtttatctaaaatctgtccgtagcccagctctcggcaacaggtataaaatggtgcat
aaaggattcaatagtatggctgttttctcacagattcctgagcaagatgaggcttactta
gcagatagtttctgcgttgaagaggaggaagaggaaaatctcaggaaaagtgacgctagt
gaagaagaggaagtgtgtgtcaattttgaccttgtaatggatgagcgctctgctagtgga
agaaaacaatacctcactcgccgcagagtaaaattaaaccaggccaagacagaacagaat
tgtgcagttccgttaacaaagaaaaggtcccgaattattgtccttgatgattctagtggg
gatgaaacaaatgtcagtaatcagaggccagtaaaaacagcttctcccaggagagactac
agccatgctcacatacccaagtcattgctttcagactctcctggacagcctaaagctcct
gctagaaagaactctattcatcagcccctggagaacaaggatcagagactaattaacctg
aaggcttcagtgtctgaagtgttggactttcagccagaaagtaggggcagaggcaggccg
tcttcgctggctattgccaacaatgatttgctgagaagggatggggattttcaggcaaaa
ctcaaggtggaaggttcttcaaaaaacctctgtgcaaacacttcagatacatggtgctct
ggttccaagggaaattctgctgctgcaccacctgtttcagctggtcttctagagagaaaa
gcctccctttgcattctggtcgacagtcgtgagatctcctctggatcagaaataatttcc
tccctgaaagcggttcatggagtaaaggtgcaggtttgctctctcggaggctgtgattac
attgtgagcaatcgaatggcagtggaaaggagaactcagtcagaactgctgaacagtatg
aacaggaacaaagttacacaacggattcagcatttgcagagcatgttcgagaggatatgt
gtgattgtggaaaaggacaggattaaagcaggagagacttcaagattattccaaaggacc
aagtactatgatgccatgctgtcagccttaatccgggctggaatccgaatccttttcagc
tcttgccaagaggaatctgcccatttgctgaaagatctggctctggtagaacagagaaag
aatgttgctattcatgtaccaacagaagtgaaaggggccaaacaagaagctctccggttc
tatctgagtattcccaacatcagctacgtagctgcactgaacatgtgccacggctttgat
tctgtgaagaagatggctaacagctgcccgaaggacatagccacctgtgcccaagtgagt
cagcagaaggctgaggagatctaccgctatatccgttctggctttgacttgcaaatgctg
cctgaaaaacttcacaccaaagggaagagtaacacgtaa
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integrated database retrieval system
