KEGG   Caretta caretta (Loggerhead turtle): 125641177
Entry
125641177         CDS       T09292                                 
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04510  Focal adhesion
ccay04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125641177 (LAMC1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125641177 (LAMC1)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N Laminin_B Alanine_zipper
Other DBs
NCBI-GeneID: 125641177
NCBI-ProteinID: XP_048716650
EnsemblRapid: ENSCECG00000010936
LinkDB
Position
8:54126929..54258693
AA seq 1594 aa
MGRGALPLLLLLELAGRCAAAMDECADEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDATQPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCENTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSAVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNDFGKLSCNCKHNTFGED
CEKCLPFYNDRPWRRATAESASECLSCNCNGRSRECYFDAELYRSTGHGGRCIGCLDNTD
GANCERCRENFYRLGSDEGCLPCNCNAVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFH
SLSEAGCRLCSCNPAGSTDDCSIETGRCTCKDNVEGFHCERCKPGFFNLDPANLRGCTPC
FCFGHSSVCTNAVGYSIYSIISNFQTGEEEWRAEQRDGSEILLQWSVETQDISVISDSYF
PIYFIAPDKFLGNQVLSYAQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSY
PSENTVKYAFRLHEATDYPWRPSLTPFEFQKLLYNLTSIKIRGTYSERSAGYLDDVTIVS
ARPEPGTPATWVESCTCPAGYHGQFCEHCAPGYRRETPSLGPYSLCVLCTCNGHSESCDP
ETGACDCRDNTAGPHCEKCSDGYYGDATTGISSDCQPCPCPGGSSCAVVPKTKEVVCTNC
PAGTTGKRCELCDDGYFGDPLGENGPARLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYN
TAGFYCDRCKDGFFGNPLASNPEVKCKACSCNPYGTVNQQTSCNQVTGQCECLPHVTERD
CSACEPGFYNLQSGRGCDRCDCHPLGSTDGHCDIQTGQCECQPGITGQRCKRCEVNHFGF
GPEGCKPCDCDTEGSRSLQCKEDGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACY
RLVRDKVAEQRERLQELENLIANLGTGDETVTDQAFEDRLKEAERDVMDLLRDAQNSKDV
DQDLMDRLKKINSTLASQLGRLQNIQNTVRETEGLAEQARERVEGTEDLIEVASNMLEKA
KMAVANVSITPPDSSGDPNNMTLLAEEARKLAERHKQEADDIVRIAKAANDTSTEAYTLL
LKTLAGENQTATDIDELNRKYNQAKNISRDLEKQANKVHAEAEEAGNKALQIYANLTSLP
AVDSKGLENEANKIKKEAEELDQLIDRKLMDYEDLREDMKGKELEVKNLLEKGRTEQQTA
DQLLARADAAKALAEEAAKKGRETLEEANDILSNLRDFDKRVNDNKTAAEEALKKIPAIT
RTIAEANNKTRQAELALGNAAEDAREAKNKADDAEKIANSVQKNAASTKSEADKTFSDVT
ELDKEVDDMLKQLQDAEKELKRKQEDADQDMMMAGVASQAAQEAEDNARKAKNSVNSLLT
IINDLLGQLGQLDPVDLNKLNEIEGTLNTAKDQMKDSDLDRKVAELEDAARRQDEAIQAY
NRDIEDILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgggtcgcggggcgctgcccttgctgctgctgctggagctggccgggcgctgcgccgcc
gccatggacgaatgcgcggacgaggcgagcgggcggccgcagcgctgcatgcccgagttc
gtgaacgccgccttcaacgtgactgtggtggccaccaacacatgcggctcgccggccgag
gagtactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgacgcc
acccagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggccgacacc
acctggtggcagagccagaccatgctggccggggtgcagtaccccagcgccatcaacctc
accctgcacctgggaaaggcctttgacatcacatatgtgcgcctgaagtttcacaccagc
cggcctgagagctttgccatctacaaacgtaccagggaagatgggccgtgggtgccttac
cagtactacagtggctcctgtgagaacacatatcagaaattaaaccgaggctttatccgg
actggggaggatgaacagcaggcactctgcacggatgagttcagtgacatctctccgctc
acaggtggcaatgtggctttttcaacactggaggggcgtcccagtgcctacaattttgac
aacagtgctgtgttacaggaatgggtgacggctactgacatccgagtgaccctcaatcgt
ctgaacacctttggagatgaagttttcaatgatccaaaagttctcaagtcctattattat
gcaatttctgattttgctgtgggtggcaggtgcaagtgcaatggccatgcaagtgagtgt
gtgaagaatgactttgggaagctgtcatgtaactgcaaacacaacacttttggggaagac
tgcgagaagtgccttcccttctacaatgaccggccatggagaagagcaacagcagagagt
gccagtgaatgtttgtcctgtaactgcaatgggcggtcacgggagtgttactttgatgct
gaactgtaccgctccacgggccatggtggtcgctgcattggctgcttggataacactgat
ggtgccaactgtgaaaggtgccgggagaacttctatcgccttggaagtgatgaaggatgt
ctaccgtgtaactgtaacgctgttggctctctcagcactcagtgtgataactatggccgg
tgcagctgcaaaccaggtgtgatgggagataaatgtgaccgatgccagccagggttccac
tccctctcagaggctgggtgcaggctatgttcatgcaatcctgctggtagcacagatgac
tgcagtattgaaacagggcgatgtacctgcaaggacaatgtggagggattccactgtgag
agatgtaaacctggatttttcaatctggatccagccaatctgagaggctgcaccccttgc
ttctgttttggtcactcctcggtctgcaccaatgccgttggctacagtatctacagcatc
atctccaacttccagactggggaggaagagtggcgtgctgaacagcgagatggctctgaa
attttactccagtggagtgtggaaacccaggacatctctgttatctcagacagctatttc
cctatctatttcattgcacctgacaagtttttgggcaatcaggttttgagttatgctcaa
aatctgaccttctcctttcgggtggataggcgggacactcgtctctctgcagaggacctg
gtgcttgaaggggctgggcttagagtatctgtgcctcttattgctcagggcaactcctat
cctagtgagaacacagtgaagtatgccttcaggctccatgaagcaacagattacccgtgg
aggccttctcttaccccatttgagtttcagaagctgctttacaacttgacttctatcaag
atccgtgggacatacagtgagagaagtgctggatacctggatgatgtcactattgtgagt
gctcgtcctgagcctggaacccctgcaacctgggtggagagttgtacctgcccagcagga
taccatgggcaattctgcgagcactgtgccccaggttataggagggagacacccagcctt
gggccatacagtctgtgtgtgctgtgtacctgtaatgggcacagtgagagctgtgaccca
gagactggtgcttgcgactgcagagataacactgcaggccctcactgtgagaagtgcagt
gatgggtattacggagatgcaactacaggcatttcgtcagactgtcagccatgtccctgt
ccagggggctccagctgcgccgtagtgcccaagactaaggaggtggtgtgcaccaactgt
cctgctggtaccacaggtaaaagatgtgagctgtgtgacgacggctattttggagatcca
cttggtgaaaatggccctgccaggctttgccgtctctgccagtgcagtgacaacattgat
cccaatgccgtggggaactgtaaccgcttgacaggggaatgcctgaaatgcatctacaac
acggctggcttctactgtgaccggtgcaaagatggtttttttgggaaccccttagcctcc
aaccctgaggttaaatgcaaggcgtgcagttgtaatccttatggaacagtgaaccagcag
acaagctgcaatcaagtaactgggcagtgtgagtgcctgccacatgtcaccgagagggac
tgtagtgcctgtgagcctggcttctacaacctacagagtggacgtggctgtgacaggtgc
gactgccatccgctgggttccaccgatggccattgtgacatacaaacagggcagtgtgag
tgtcaaccaggcatcactgggcagcgctgcaagagatgtgaggtcaaccacttcggattc
ggacctgaaggctgcaaaccatgtgactgtgacaccgagggctctcgctcactacagtgc
aaggaggatggtcgctgtgagtgtaaggaaggctttgtggggagccgttgtgaccagtgt
gaagagaattatttctacaatcggtcctggcctggttgtcaagaatgtcctgcatgctat
agactggttagagataaggtggcagaacaacgcgagaggttgcaggagctggaaaatcta
atagcaaaccttggtactggagatgaaacggtgactgatcaggcttttgaggacagactg
aaggaggcagagagagatgtcatggacttgcttcgagacgcacagaacagcaaagatgtg
gatcaggacctgatggatcgtctcaagaaaattaacagcactctggcaagccagcttggc
cgattacagaacatccaaaatacagtgagggagactgaaggcctagctgagcaagcccga
gagcgggtggagggcacagaggacctgattgaagtagcttctaatatgctagagaaggca
aagatggcagttgccaatgtgtccattaccccaccagactccagtggtgacccaaacaac
atgactctcttggcagaagaggctcgtaaactggctgaacgacacaaacaagaagctgat
gacattgtgcgcatagcaaaggcagcaaatgatacatccacagaagcgtatacattgctg
ttgaagacactggcaggagagaaccaaactgcaactgacatagatgagctcaacaggaag
tataatcaagcaaaaaacatttcacgagacctagagaaacaggctaacaaggtgcatgcg
gaggcagaggaagctgggaataaggccctgcagatctatgctaatctcaccagtcttcct
gctgtggactccaaggggctagagaatgaggcaaataagatcaagaaggaggcagaggag
ctggatcagctcattgacaggaagttgatggattatgaggatttgagagaggacatgaaa
gggaaggagctggaagtgaagaatctcttggagaaaggaaggactgaacaacagactgcc
gaccagctgctggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaag
gggagagagacactagaggaggccaatgacattctcagcaacctgagagattttgacaag
cgtgtgaatgataacaagacagccgctgaggaggcactgaagaagattcctgccattact
cgaaccattgctgaggccaataataagacaaggcaagcagagctggctcttggtaatgct
gctgaggatgccagagaagccaagaacaaagcagatgatgctgagaaaattgcaaattct
gtccagaagaatgctgccagtacaaagtctgaggccgacaagacgttttctgatgtgaca
gagctagataaagaagtggatgacatgctgaaacagctgcaagatgcagagaaggagctg
aagaggaagcaggaggatgctgatcaggatatgatgatggcaggcgtggcttcacaggct
gcccaagaggcagaagacaatgcaagaaaagctaagaactctgttaacagcttgctcacc
atcattaatgaccttctgggacagctagggcaactggacccagtggacttgaacaaactg
aatgagatcgagggtaccctgaacacggccaaagatcagatgaaagatagtgacctggac
cggaaagttgctgaattggaggatgcagccaggcggcaggacgaagccatacaggcctac
aacagggacattgaggatatcctgaaagacattaacaacctagaagacatcaagaagacc
ttgccgtctggatgtttcaacaccccgtccattgagaaaccctaa

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