Caretta caretta (Loggerhead turtle): 125641177
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Entry
125641177 CDS
T09292
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04510
Focal adhesion
ccay04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125641177 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125641177 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
125641177
NCBI-ProteinID:
XP_048716650
EnsemblRapid:
ENSCECG00000010936
LinkDB
All DBs
Position
8:54126929..54258693
Genome browser
AA seq
1594 aa
AA seq
DB search
MGRGALPLLLLLELAGRCAAAMDECADEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDATQPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCENTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSAVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNDFGKLSCNCKHNTFGED
CEKCLPFYNDRPWRRATAESASECLSCNCNGRSRECYFDAELYRSTGHGGRCIGCLDNTD
GANCERCRENFYRLGSDEGCLPCNCNAVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFH
SLSEAGCRLCSCNPAGSTDDCSIETGRCTCKDNVEGFHCERCKPGFFNLDPANLRGCTPC
FCFGHSSVCTNAVGYSIYSIISNFQTGEEEWRAEQRDGSEILLQWSVETQDISVISDSYF
PIYFIAPDKFLGNQVLSYAQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSY
PSENTVKYAFRLHEATDYPWRPSLTPFEFQKLLYNLTSIKIRGTYSERSAGYLDDVTIVS
ARPEPGTPATWVESCTCPAGYHGQFCEHCAPGYRRETPSLGPYSLCVLCTCNGHSESCDP
ETGACDCRDNTAGPHCEKCSDGYYGDATTGISSDCQPCPCPGGSSCAVVPKTKEVVCTNC
PAGTTGKRCELCDDGYFGDPLGENGPARLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYN
TAGFYCDRCKDGFFGNPLASNPEVKCKACSCNPYGTVNQQTSCNQVTGQCECLPHVTERD
CSACEPGFYNLQSGRGCDRCDCHPLGSTDGHCDIQTGQCECQPGITGQRCKRCEVNHFGF
GPEGCKPCDCDTEGSRSLQCKEDGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACY
RLVRDKVAEQRERLQELENLIANLGTGDETVTDQAFEDRLKEAERDVMDLLRDAQNSKDV
DQDLMDRLKKINSTLASQLGRLQNIQNTVRETEGLAEQARERVEGTEDLIEVASNMLEKA
KMAVANVSITPPDSSGDPNNMTLLAEEARKLAERHKQEADDIVRIAKAANDTSTEAYTLL
LKTLAGENQTATDIDELNRKYNQAKNISRDLEKQANKVHAEAEEAGNKALQIYANLTSLP
AVDSKGLENEANKIKKEAEELDQLIDRKLMDYEDLREDMKGKELEVKNLLEKGRTEQQTA
DQLLARADAAKALAEEAAKKGRETLEEANDILSNLRDFDKRVNDNKTAAEEALKKIPAIT
RTIAEANNKTRQAELALGNAAEDAREAKNKADDAEKIANSVQKNAASTKSEADKTFSDVT
ELDKEVDDMLKQLQDAEKELKRKQEDADQDMMMAGVASQAAQEAEDNARKAKNSVNSLLT
IINDLLGQLGQLDPVDLNKLNEIEGTLNTAKDQMKDSDLDRKVAELEDAARRQDEAIQAY
NRDIEDILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcggggcgctgcccttgctgctgctgctggagctggccgggcgctgcgccgcc
gccatggacgaatgcgcggacgaggcgagcgggcggccgcagcgctgcatgcccgagttc
gtgaacgccgccttcaacgtgactgtggtggccaccaacacatgcggctcgccggccgag
gagtactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgacgcc
acccagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggccgacacc
acctggtggcagagccagaccatgctggccggggtgcagtaccccagcgccatcaacctc
accctgcacctgggaaaggcctttgacatcacatatgtgcgcctgaagtttcacaccagc
cggcctgagagctttgccatctacaaacgtaccagggaagatgggccgtgggtgccttac
cagtactacagtggctcctgtgagaacacatatcagaaattaaaccgaggctttatccgg
actggggaggatgaacagcaggcactctgcacggatgagttcagtgacatctctccgctc
acaggtggcaatgtggctttttcaacactggaggggcgtcccagtgcctacaattttgac
aacagtgctgtgttacaggaatgggtgacggctactgacatccgagtgaccctcaatcgt
ctgaacacctttggagatgaagttttcaatgatccaaaagttctcaagtcctattattat
gcaatttctgattttgctgtgggtggcaggtgcaagtgcaatggccatgcaagtgagtgt
gtgaagaatgactttgggaagctgtcatgtaactgcaaacacaacacttttggggaagac
tgcgagaagtgccttcccttctacaatgaccggccatggagaagagcaacagcagagagt
gccagtgaatgtttgtcctgtaactgcaatgggcggtcacgggagtgttactttgatgct
gaactgtaccgctccacgggccatggtggtcgctgcattggctgcttggataacactgat
ggtgccaactgtgaaaggtgccgggagaacttctatcgccttggaagtgatgaaggatgt
ctaccgtgtaactgtaacgctgttggctctctcagcactcagtgtgataactatggccgg
tgcagctgcaaaccaggtgtgatgggagataaatgtgaccgatgccagccagggttccac
tccctctcagaggctgggtgcaggctatgttcatgcaatcctgctggtagcacagatgac
tgcagtattgaaacagggcgatgtacctgcaaggacaatgtggagggattccactgtgag
agatgtaaacctggatttttcaatctggatccagccaatctgagaggctgcaccccttgc
ttctgttttggtcactcctcggtctgcaccaatgccgttggctacagtatctacagcatc
atctccaacttccagactggggaggaagagtggcgtgctgaacagcgagatggctctgaa
attttactccagtggagtgtggaaacccaggacatctctgttatctcagacagctatttc
cctatctatttcattgcacctgacaagtttttgggcaatcaggttttgagttatgctcaa
aatctgaccttctcctttcgggtggataggcgggacactcgtctctctgcagaggacctg
gtgcttgaaggggctgggcttagagtatctgtgcctcttattgctcagggcaactcctat
cctagtgagaacacagtgaagtatgccttcaggctccatgaagcaacagattacccgtgg
aggccttctcttaccccatttgagtttcagaagctgctttacaacttgacttctatcaag
atccgtgggacatacagtgagagaagtgctggatacctggatgatgtcactattgtgagt
gctcgtcctgagcctggaacccctgcaacctgggtggagagttgtacctgcccagcagga
taccatgggcaattctgcgagcactgtgccccaggttataggagggagacacccagcctt
gggccatacagtctgtgtgtgctgtgtacctgtaatgggcacagtgagagctgtgaccca
gagactggtgcttgcgactgcagagataacactgcaggccctcactgtgagaagtgcagt
gatgggtattacggagatgcaactacaggcatttcgtcagactgtcagccatgtccctgt
ccagggggctccagctgcgccgtagtgcccaagactaaggaggtggtgtgcaccaactgt
cctgctggtaccacaggtaaaagatgtgagctgtgtgacgacggctattttggagatcca
cttggtgaaaatggccctgccaggctttgccgtctctgccagtgcagtgacaacattgat
cccaatgccgtggggaactgtaaccgcttgacaggggaatgcctgaaatgcatctacaac
acggctggcttctactgtgaccggtgcaaagatggtttttttgggaaccccttagcctcc
aaccctgaggttaaatgcaaggcgtgcagttgtaatccttatggaacagtgaaccagcag
acaagctgcaatcaagtaactgggcagtgtgagtgcctgccacatgtcaccgagagggac
tgtagtgcctgtgagcctggcttctacaacctacagagtggacgtggctgtgacaggtgc
gactgccatccgctgggttccaccgatggccattgtgacatacaaacagggcagtgtgag
tgtcaaccaggcatcactgggcagcgctgcaagagatgtgaggtcaaccacttcggattc
ggacctgaaggctgcaaaccatgtgactgtgacaccgagggctctcgctcactacagtgc
aaggaggatggtcgctgtgagtgtaaggaaggctttgtggggagccgttgtgaccagtgt
gaagagaattatttctacaatcggtcctggcctggttgtcaagaatgtcctgcatgctat
agactggttagagataaggtggcagaacaacgcgagaggttgcaggagctggaaaatcta
atagcaaaccttggtactggagatgaaacggtgactgatcaggcttttgaggacagactg
aaggaggcagagagagatgtcatggacttgcttcgagacgcacagaacagcaaagatgtg
gatcaggacctgatggatcgtctcaagaaaattaacagcactctggcaagccagcttggc
cgattacagaacatccaaaatacagtgagggagactgaaggcctagctgagcaagcccga
gagcgggtggagggcacagaggacctgattgaagtagcttctaatatgctagagaaggca
aagatggcagttgccaatgtgtccattaccccaccagactccagtggtgacccaaacaac
atgactctcttggcagaagaggctcgtaaactggctgaacgacacaaacaagaagctgat
gacattgtgcgcatagcaaaggcagcaaatgatacatccacagaagcgtatacattgctg
ttgaagacactggcaggagagaaccaaactgcaactgacatagatgagctcaacaggaag
tataatcaagcaaaaaacatttcacgagacctagagaaacaggctaacaaggtgcatgcg
gaggcagaggaagctgggaataaggccctgcagatctatgctaatctcaccagtcttcct
gctgtggactccaaggggctagagaatgaggcaaataagatcaagaaggaggcagaggag
ctggatcagctcattgacaggaagttgatggattatgaggatttgagagaggacatgaaa
gggaaggagctggaagtgaagaatctcttggagaaaggaaggactgaacaacagactgcc
gaccagctgctggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaag
gggagagagacactagaggaggccaatgacattctcagcaacctgagagattttgacaag
cgtgtgaatgataacaagacagccgctgaggaggcactgaagaagattcctgccattact
cgaaccattgctgaggccaataataagacaaggcaagcagagctggctcttggtaatgct
gctgaggatgccagagaagccaagaacaaagcagatgatgctgagaaaattgcaaattct
gtccagaagaatgctgccagtacaaagtctgaggccgacaagacgttttctgatgtgaca
gagctagataaagaagtggatgacatgctgaaacagctgcaagatgcagagaaggagctg
aagaggaagcaggaggatgctgatcaggatatgatgatggcaggcgtggcttcacaggct
gcccaagaggcagaagacaatgcaagaaaagctaagaactctgttaacagcttgctcacc
atcattaatgaccttctgggacagctagggcaactggacccagtggacttgaacaaactg
aatgagatcgagggtaccctgaacacggccaaagatcagatgaaagatagtgacctggac
cggaaagttgctgaattggaggatgcagccaggcggcaggacgaagccatacaggcctac
aacagggacattgaggatatcctgaaagacattaacaacctagaagacatcaagaagacc
ttgccgtctggatgtttcaacaccccgtccattgagaaaccctaa
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integrated database retrieval system