Caretta caretta (Loggerhead turtle): 125644436
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Entry
125644436 CDS
T09292
Symbol
RBBP6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125644436 (RBBP6)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125644436 (RBBP6)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
U-box type E3
125644436 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125644436
NCBI-ProteinID:
XP_048724361
LinkDB
All DBs
Position
10:82803671..82847154
Genome browser
AA seq
1762 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMNDAVVIPCCGNSYCDECIRTSLLESEEHTCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQPPRQTVQRNLQPAVRPPVSRQQD
PLMIPVTSAPSLTSSLTPSQSSVTTTLPVNQSSATAPAADISATMSISLHSEKPEGPFHD
ADSVIPPAAIVPASEHSKTSSSLSISTVMEEKGYQVPVLRQPALQGQLTSQGQSIPTTGQ
PIRTNTVRSAGNRPGWEPSSNRGRPHSERTQRTQAPTLPASTPVFVTVPPPPLFPPPPHA
LPLPPGVPPPQFPPQFPPGQPPPAGYNVPPPGYPPAPANISTPWVPTAVPTAHSNTIPTT
QAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYS
ASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSH
GYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQGEGEREYFNRYREVPPYDMKAYYG
RSVDFRDPFEKERYREWERNYREWYEKFYKGYAAGAQPRPPVTRENFSPDRFGPPGSRRE
NSPYARGRREDFASGQSHRSRNIGSNYPEKTSGREGHNIKDPTKSKEKEAENPSGDGKGN
KHKKHRKRRKGEESEGFPNAELLEGSRKPREPGGGDEIKTDSLFMLPSRDDATPVRDEPM
EADSIAFKPVSEKEKKEKDKPKVKVDKTKRKTEGTATTKKDSLVKPSKAPQEKAEADREK
SPRTEPPVKKAKEELPKTDSTKSTSSQKDEKALGTPRKVNPKVTKEHPETRPAKDEKAKK
EHPKESKPEKPSSKEEKSKKPMEKSKPTDTKPEKRKRKAEEKVEKEHETTSLKTSKAEVA
EVKPSPKGKTEPDDERAERSPEKDKGASLIAPAKKIKLNRETGKKIVSGENVPPTKEPAE
KPEPPSSKVKQEKVKGKMRRKVTAADGSSSTLVDYTSTSSTGGSPVRKSEEKPDAKRTVI
KTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQTPSNVGKPASVVKNVS
AKPTNPVKHNEKENEPLEKTQKTAKEANYESSQHEAKSSKSSVSNEKGKTKERDHSVSDK
DTSERRKSNVQPEKGHSERGTEQGNLKNLSQSSKDSRSSDKHDIGRGSSTRDFTPNRDKK
SDHDSSRDHSSFKRRDEKNELTRRKDSPSRNRESASGQKSKPREERTELSKKGTVESKRS
SYSPQRDRRQHDHKTAYESKRSSDEHKSLDRSSGKEREKHITETKSNKDRDTSGNKSSYK
HGSPDAKNEREHATGQSDKSTIKPKPPLSHSSRLSSDLTRETDEAAFVPDYNESDSESNV
STKDEDSIGRNTRELKEKAVDKTKETAVKATLGQPGVSRNQSQSSPSVSRSRSQSPSESQ
TRSHSSSASSAESQDSKKKKKKKDKKKHKKHKKHKKHKKHTGNESELEKSQKHKHKKKKS
KKSKDKEKEKEKDDQKVKSVAV
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtccattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctccacatctccctgtgcgacctcaagcgccagatcatgggccgcgagaagctcaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacacagatgat
agtgccctgattcctaagaactcatctgtaattgttagaagaatccctattggaggagtt
aaatctacaagcaaaacatatgtcataagtcgaactgaaccagtgagtggaacttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttccgaagaagataaaataaaagctatgatgtcacagtctggccat
gaatatgatccaatcaattacatgaagaaacctttgggtccacctccaccatcctatacg
tgctttcgttgtggaaaacctggtcattacataaagaattgcccaacaaatggggacaaa
aattttgagtctgttcccaggattaaaaagagcacaggaattcccaggagtttcatgatg
gaagtgaaagatcccaatacaaagggtgctatgcttacaaacacaggaaaatatgcaata
ccaactattgatgcggaggcttatgctatagggaagaaggaaaagccccctttcctccca
gaggaaccatcctcctcctcagaagaggacgatcctattccggatgaattgttatgtcta
atctgcaaagatataatgaatgatgcagttgtcattccctgctgtggaaacagttattgt
gatgaatgtatcagaacatcactactggaatcagaggaacatacctgcccaacttgtcat
caaacagatgtttcccctgatgctttaattgccaacaaattcttacgccaggctgtaaac
aacttcaaaaatgaaactggctacacaaaaaggctccgaaagcagatacaaccaccaaga
cagacagttcagcggaacctgcaacctgcagtaaggcctccagtttccagacaacaggat
cctctaatgattccagtcacttctgcaccttctctaacatcgtcactgactcctagtcaa
tcatctgtgacaactactttgccagtaaatcagtcttctgccactgcacctgcggctgat
atctctgcaacaatgtccatatctcttcactctgaaaaaccagaaggaccttttcacgat
gctgatagtgttatacctcctgctgctattgtgccggcctccgaacattctaaaacttct
tcctctctatcgattagcactgtgatggaagagaagggctatcaggttcctgtactaaga
cagccagcattacaaggccagctgacttcacaaggacagtcaatacccactactggtcag
ccaataagaaccaatacggttcgctctgcaggcaataggccaggctgggaaccaagttca
aatcgaggacgcccgcatagtgaacgtacacaaaggactcaggccccaacattaccagca
tcaacacctgtctttgtgactgtgcctcctcctcccctgtttcctccacctccccatgca
cttcctcttccaccgggggtacctccaccacagtttcctcctcagtttccacctggtcag
cctccacctgctgggtacaatgtccccccaccgggataccccccagctcctgcaaacata
tcaacaccttgggtaccaacagcagtaccaacggctcattcaaataccatcccaacgaca
caagcacctcctttatctagggaggaattttacagagagcagcggagacttaaagaggaa
gaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattgatggaa
tacaagaagattcaaaaggaacgtagacgctcattttccaggtccaagtcaccatatagt
gcttcatcttactctagaagctcatatacctactctaagtcaagatcaggttcatcccgc
tcccgttcctactctcgatcctttagtcgctcacactctcgttcatactcacgatcacct
ccataccctagaagaggcagggggaagagtcgtaactatcgttctaggtcaaggtcccat
ggatatcatcgttcaagatcaaggtcacccccatatagaagataccattcacgatcaaga
tctccagtttttagaggccaatcccccactaagcggactgtacctcaaggagagggggag
agagaatattttaaccggtatagagaagttccaccatatgacatgaaagcatactatggc
agatctgtggattttagggatccatttgaaaaggaaagatacagagaatgggaaaggaac
tatcgagagtggtatgaaaagttttacaagggctatgctgctggagctcagcctagacct
ccagtgactagagagaacttttctccagaccgatttggtccaccaggatccaggcgagag
aattccccatatgctcggggtcgtagagaggattttgctagtggacaaagccatagaagt
cgcaatataggtagcaattatccagaaaagacttcaggccgagaaggccacaacattaaa
gatcctacaaaatcaaaggaaaaggaagctgaaaatccatcaggagatggcaaaggaaat
aaacataaaaagcatagaaagagaaggaaaggggaagagagtgaaggctttcccaatgct
gagttgttggaaggctcacgaaagcccagagagcctggtgggggggacgaaattaaaaca
gactcgctgttcatgctcccaagtagggatgatgctacacctgtcagagatgagcctatg
gaagcagattctattgcttttaaaccagtatctgaaaaggagaaaaaagagaaagataaa
cctaaagtaaaagttgacaagacaaaacggaaaacagaaggaactgccactaccaagaaa
gacagtttagtaaaaccatctaaagcaccccaagaaaaagcagaggctgatcgtgaaaag
tctcctcgaactgagcctcctgtgaaaaaagcaaaggaggagttaccaaagacagacagt
actaaatcgacttcatctcaaaaggatgagaaggcgctaggcacaccacggaaagttaac
ccaaaagtgacaaaagagcatccagaaaccagaccagccaaggacgaaaaagcaaagaaa
gagcatccaaaagaatccaagccagaaaagccatcaagcaaggaagagaagtcaaaaaaa
ccgatggaaaaaagcaaacctactgatacaaaacctgaaaaaagaaaaagaaaggcagag
gaaaaggtagaaaaggaacatgaaaccacttcattaaaaacctctaaagcagaagttgct
gaagtgaaaccatcaccaaagggaaaaactgagcctgatgatgaaagagcagagagatcc
cctgaaaaggacaaaggtgcttctctgattgccccagcaaaaaagattaaactaaaccga
gaaacgggcaaaaagattgtaagtggggaaaatgtacctcctacaaaagaacctgccgag
aaacctgagccacccagtagcaaagttaaacaagaaaaagtgaaaggaaaaatgagaaga
aaagtaacagcagctgatggatccagttcaactcttgtagattacaccagcactagctct
actggaggcagccctgttagaaagtcagaagaaaagccagacgcaaaacgaacggtcatt
aagacaatggaagagtataataatgatataacagcccctgctgaagatgtcattattatg
attcaggttcctcagtcaaagtgggataaagatgactttgagtctgaagaggaagacgtt
aaatctacacaaacaccttcaaatgtaggaaaacctgctagtgttgtaaaaaatgtcagt
gctaagcccacaaaccctgtgaaacacaatgaaaaagaaaatgagcctttggaaaaaaca
cagaaaactgcaaaagaagcaaattatgaaagctcccagcatgaagcaaaaagttcaaaa
agttctgtgtcaaatgaaaaagggaaaaccaaagagcgggatcattctgtgtcagacaag
gacacttctgagagaaggaagagcaatgttcaaccagaaaaaggccactcagaacgtggg
actgaacaaggaaacctaaaaaacctttctcaatcttccaaagacagcagatcttcagat
aaacatgatattgggcgtggctcttccactagagattttactcctaacagggacaaaaaa
tctgaccatgatagcagcagggatcattctagtttcaagcgtagagatgaaaagaatgag
ttaacaaggagaaaagactccccttctcgaaatagagagtctgcatcaggccagaagagt
aaaccaagagaagaacgtacagaattgtccaaaaagggaaccgtagagtccaaaaggagc
agctatagtcctcagagggacagaagacagcatgatcacaaaacagcatatgagtccaaa
cgttcatctgacgaacacaaatctctagatagaagttcgggtaaagagagagagaaacac
ataacggaaacaaagagcaataaagacagagacacaagtggcaataaatcatcttacaaa
catggatcaccggatgcaaaaaatgagagagaacatgctactgggcaaagtgacaagagc
accatcaaacctaagcctccgttaagccactcctctcgactctcttctgacttaactaga
gaaactgatgaggctgcatttgtaccagactacaatgaaagtgacagcgagagtaatgtg
tcgacaaaagatgaagactctataggaagaaatactagagaactgaaagaaaaggcagtg
gataaaacgaaagagactgcagttaaagcaacgcttggccaacctggcgtaagtagaaac
cagagtcaaagtagtcccagtgttagccgcagtcgtagtcagagcccttctgaaagtcag
actcggagccacagcagcagcgcaagctcagcagagagtcaggacagcaagaaaaagaaa
aagaaaaaagacaaaaagaaacataagaagcataaaaaacacaagaaacataagaaacac
actggaaatgaatctgaattggagaaaagccaaaaacacaaacacaagaagaaaaaatcc
aagaagagcaaagataaagaaaaggagaaagagaaagatgaccaaaaagtgaaatctgtc
gctgtataa
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integrated database retrieval system
