Campylobacter coli RM1875: YSQ_05410
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Entry
YSQ_05410 CDS
T03164
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf00470
D-Amino acid metabolism
ccf00550
Peptidoglycan biosynthesis
ccf01100
Metabolic pathways
ccf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSQ_05410
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YSQ_05410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YSQ_05410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccf01011
]
YSQ_05410
Enzymes [BR:
ccf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
YSQ_05410
Peptidoglycan biosynthesis and degradation proteins [BR:
ccf01011
]
Precursor biosynthesis
Amino acid ligase
YSQ_05410
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AHK73400
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Position
1030859..1031899
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AA seq
346 aa
AA seq
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MKLAILFGGNSYEHEISIVSAVVLKKVINTDLTFIFCDEKRRFYLIPSEKMNSKTFSGGA
YQKEKELFLRQKAFYHKSLWSEKNLDLDCVINLIHGRDGEDGKIASLLEFFDIKFIGPRV
EASVLSFNKEFTKLYAQSVGVKTLDYQMLRKSQKQDFTAHFPCILKPARLGSSIGISIAK
NEKELDYAKDVGFEFDTDILVEDFKSNIKEYNLAGCMIKDEFIFSIIEEPKKKEFLDFEQ
KYLSFSGHNELIEADLSEELKQKLKDNFAKIYNPLFKGALIRCDFFILDNEVYLNEINPN
PGSLANYLFKDFNKIIEQLALSIESEKKIKITYEFLHSINGQKGKL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagcgatactttttggcggaaattcttacgaacatgaaatcagcattgtaagt
gctgtggtattaaaaaaagtgataaatacggatttgacatttattttttgcgatgaaaaa
aggagattttatttaattcctagcgaaaaaatgaattctaaaacctttagcggtggtgct
taccaaaaagaaaaggagttatttttaagacaaaaggctttttatcataaaagtctatgg
agtgaaaaaaacttagatttagattgtgtgatcaacctcatccacggaagagatggagaa
gacggaaagatagcttctttgcttgaattttttgatatcaaattcataggtcctagggtt
gaagcaagtgttttatctttcaataaagagttcacaaaactttacgcacaaagcgttggg
gttaaaactctagattatcaaatgcttagaaaaagtcaaaagcaagattttacagctcat
tttccttgcattttaaagcctgcacgacttgggagcagtatagggattagcatagctaaa
aatgaaaaggaattggattatgctaaggatgtgggttttgagtttgatactgatattttg
gtagaggattttaaaagtaacatcaaagagtacaatcttgcaggatgtatgatcaaagat
gaatttatcttttcaatcatcgaagaaccaaagaaaaaagaatttttggattttgagcaa
aaatatcttagtttttcaggccataacgaacttatcgaagctgatttgagcgaagaatta
aagcaaaagcttaaagataattttgccaaaatttataatcctttatttaaaggtgcttta
atccgttgtgattttttcatcctagataatgaagtttatctgaatgaaatcaatccaaat
ccaggctctttagcaaattatcttttcaaagattttaacaaaattatagagcaacttgct
ctaagtatagaaagcgaaaagaagattaaaatcacttatgaatttttacattctattaat
ggacaaaaaggcaaattataa
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