Cohnella cholangitidis: FPL14_16075
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Entry
FPL14_16075 CDS
T07708
Name
(GenBank) alpha-amylase
Organism
cchl
Cohnella cholangitidis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_25
fn3
RGI_lyase
Big_7
fn3_2
CBM_20
AMPK1_CBM
Glyco_hydro_57
T-box
Motif
Other DBs
NCBI-ProteinID:
QMV42548
UniProt:
A0A7G5C014
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All DBs
Position
3457658..3462646
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AA seq
1662 aa
AA seq
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MRIVGRKIIVLLASFIFILAFGASAAFAEISATHVYHNHMPNFWAYYNTSGYNSTAVGSP
IRYTYDGQVIELKKNPPAGYTYFNPKNGTALPHDDLVSYYTHNAKTGAYLYWSWQVADSL
NKSNPSGQVQVTMSAAVVNNVNSFMTTNNVPGYNNANWGLPWKTAYNNLKTPNGNRTLDV
INFSGHHSMGPLTGNDYLLKDLIYQRTTLSQSYFLGDSFTASKGFFPTELGFSERIIPVL
DKLGIQWSVIGNNHFSRTLTDYPYLNDPGKDTMVSPPNRADLQNTSTVGSWVEQPMFNEK
QVTYNKFPFASTPHWVRYVDPGTGKENRVVGVPVAQAESWEEGYQGSAKATVLKSFEGLL
PQKQFFVIAHDGDNSSGRAGSEDTWRNAANVTYADSGVKAEGISEYLVKNTPAASDVVHV
QDGSWIDTRDSSSDPTWYHWRLPFGIWKGQFSAFNTATGLNLAPKKNLNGVEDGMTVSFE
YGYHYLERNFALLQAAENYAKTAEQIWLDDHPNYWQPTSALDKQVTYSGNQLNPWMLSYP
VKGDAANDYKGGANPAELGWYFLLPAMDSGFGYYDENVDDGVKPTLSFNNSLYFTKPYVT
SNKAKDKTGPNVWWPQRYPYNPGSANVSKAEGWTLQYYDNTFGIYTYAYDVSGISDIKLK
VRTHRDKTASALDNTFRVYDPAALKAQGVQNIDPAKVGSWVEYPMNKRDLKPDINGVAWQ
PESTAMFKVVPAQEIGDLYYTYLSNYRDQMLDYYIETVDNAGNVTKSEIQTVYVGAGKYS
KDASGKIVEDANGTIQGTYPFLVIDKEAPSVPANLQAANTTDRSVSLTWAASTDNVGVSA
YEVYRDGVKVGTASTAAYTDAGLTASTSYVYTVKALDKVGNISLASSPLTVMTKVPDNEP
PAAPTDLTNGAKTASTIQLSWTAATDNYGVLGYDIYRNGTKVGNTDKTTYTDSDLSPNTT
YDYYAKAIDAAGNASAASIILSVKTESGNVVTIYYKQGYTTPYIHYRPIAGTWTTSPGVL
MPQSDLTGYNKITLNVGTASGAEVVFNNGSGTWDNNGGKNYTFQQGIWTFASGTITAGVP
TGIDTAAPTAPTNLQATAKTQTSVTLTWSASTDNVGVTGYEIYRNGVKVGTSAATTYVNS
GLTAGTAYTFTVKAYDAAGNLSAAGTALEVTTEPLDSVAPTVPTNVQSTAKTHNSITLSW
SASTDNVGVTGYEIYRNSAKVGTSATTTYVDNNLAAATAYTYMLKAYDALGNTSEASSEL
QVTTNAAPLSNKATIYYKRGYSTPYFHYAPTGGAWTAVPGIAMQASEFTGYSVITVDIGT
ATSLAAVFNNGGGTWDNNGGKNYSFQQGIWTFANGTITAGPPEGSIVDTLAPTEPTNVQA
TAKTHDSVTLSWSASTDNVGVTGYEIYRNGFKIGTSTQTTFTDTGLTAQTAYTYTVKAYD
AKANMSVASSGLLVTTNAVPLSNTATIYYKQGFSSPYIYYMPTGGAWTALPGVAMQPSAE
YAGYSVITVNLGTATSMKATFNNGSGTWDNNGGNNYTFEQGTWTFENGKITSGAPVLPQT
QSLTIKLTVPMTTAANDSVYIAGSFNNWNPADSNYKLTPNSDGTYSITMSLMAGTTIQYK
FLRGSWATVEANSNNSDIANRSYTMPNSAQTLTQTVVKWKDK
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
ttgaggatcgttggacgtaaaattatcgtcttgttagcttcatttatattcatactcgca
ttcggcgcttccgcggcttttgccgagatatcggcgacccatgtataccacaaccatatg
ccgaatttttgggcctactataatacttccggatacaactctacggcagtagggtccccc
attcgttatacctatgacggccaggtcattgaactgaagaaaaatcctcctgccggctat
acgtactttaatcccaaaaatggcaccgcgttaccgcatgacgacttggtatcctattat
acgcataatgctaaaacgggagcttacttgtattggtcgtggcaagtagcggattcgttg
aataaatcgaatccttccggccaggtgcaagttactatgtccgcggcagtcgtaaataac
gtcaacagcttcatgactaccaacaatgttcccggatataacaatgccaattgggggctc
ccttggaaaacggcgtataacaatttaaaaacgccgaacggaaatcgtacgttggatgtc
attaatttcagcggacatcattccatgggacctttgacgggaaatgactatttactgaaa
gatttgatttaccagaggaccactttgtctcagtcctactttctaggagactcgtttact
gcttcgaaagggtttttcccgacggagcttggtttctcggagcggatcataccggttctg
gataaattagggattcagtggtcggttatcggaaataatcacttttccagaacattgacc
gattatccgtacttaaacgacccgggcaaggatactatggtatctccgccgaaccgggcg
gatcttcagaacacgagcactgtaggctcatgggttgaacaacctatgttcaatgaaaag
caggtcacctacaataaatttccgttcgcttcaacgcctcattgggttcgttatgtcgat
cccggtacaggcaaagaaaaccgggttgtaggcgtccccgtcgcgcaagccgaatcttgg
gaagaaggataccaaggctctgccaaggcgactgttcttaagtcatttgaaggcttgttg
ccgcagaagcaatttttcgtcattgcgcacgatggcgataactcttccggccgtgccggc
tcggaagatacttggcgcaacgccgcgaatgtaacctatgccgactccggcgtcaaagcg
gaaggtattagtgaatacctggttaagaatacgcctgcggcgagcgatgtcgttcacgta
caggatggatcatggatcgatacgcgcgattcttcttccgatccgacatggtaccattgg
cgtttaccgtttggaatatggaaaggccagttctccgcattcaacacggctacaggattg
aacctcgcgcctaagaaaaatctgaacggcgtcgaagacggaatgacggtatccttcgaa
tacggatatcattatttggaaagaaacttcgcgcttctgcaagcagcagagaattacgcg
aaaacagcagagcaaatttggctggacgatcatccgaattactggcaaccgacatcggcg
ctggacaagcaagttacgtattccggcaaccagttgaatccgtggatgttatcgtatccc
gttaaaggggatgcagccaatgattataagggcggagccaatccggccgagctcggatgg
tatttcctccttccggctatggattccggattcgggtattatgacgagaatgtggatgac
ggcgtgaagcctacgctttcgtttaacaattccttgtatttcacgaagccctatgtaacc
agcaataaggctaaggataaaaccggccctaacgtatggtggccgcagcgttatccatac
aacccgggcagcgcgaacgtaagcaaagccgagggttggacgcttcaatattatgacaac
actttcggtatctacacgtacgcatacgacgtcagcgggataagcgacatcaaattgaag
gtcagaacgcatcgcgacaagacggcaagcgcattggacaatacgttccgcgtctacgac
ccggcagcattgaaggcgcaaggcgtacagaatatcgatccggccaaagtcggatcatgg
gttgaatatccgatgaataagcgcgacctcaagccggatatcaacggagtcgcttggcag
ccagaaagtaccgcaatgttcaaggttgttcctgcgcaagaaattggcgatttgtactac
acttacttgagcaactatcgtgatcaaatgctggactactatattgaaaccgttgacaat
gcgggcaatgtgacgaagtcggaaattcaaacggtttacgtaggagcaggcaaatactcg
aaggacgcttccggtaagatcgttgaggatgcgaacggaacgattcaaggaacttacccg
ttcctggttatcgataaggaagctccttccgttcctgcaaatcttcaagctgcaaatacg
actgaccgttcagtaagtttgacttgggcagcgtcgacggataacgtaggcgtatccgct
tacgaagtctatcgggacggagtcaaagtcggcacggcttcaaccgcagcatatacggat
gcgggactgacagcttcaacctcttatgtatatacggtcaaggcattggataaggtgggc
aatatctcgttggcaagctcgccgttgacggtgatgaccaaggttccggataacgaacct
cctgcggcgccgaccgatttgactaatggcgcgaagacagcttcgacgattcaattaagc
tggacggcggctaccgacaactacggcgtgttgggttacgacatttaccgcaacggcacc
aaggttggcaacaccgataaaacaacgtatacggacagtgatttaagtccgaatacgact
tatgactattacgcaaaagcaatcgatgcggccggaaatgcgtctgcagcaagcattatc
ctttcggtcaaaacagagtcgggcaatgtcgttacgatttactataaacaaggttataca
acgccatatatccattaccgcccgatagccggcacatggacgacctctccaggggtgtta
atgccgcaatctgatctaacaggatacaacaagattacattaaatgtaggcacagcatca
ggagccgaggtcgtattcaacaacgggagcggcacatgggacaataacggcggcaaaaac
tatacgttccagcaaggaatatggaccttcgcaagcggtacgatcacagcaggtgttcct
acaggtatagatacggctgccccaactgcgccgacgaatttacaggcgacagcgaagacg
caaacttcggttaccctgacgtggagcgcatcgacggacaatgtcggagtcaccggctat
gagatttaccggaacggagtgaaggtcggcacatcggccgccacgacttacgtgaacagc
ggtttgacggctggcacggcgtatacctttacggtcaaggcctatgatgcggctggcaac
ctgtcggcagccggtactgcgcttgaggtaacgacggaaccgttagactcagtcgcgccg
actgtaccgactaatgtacagtcgaccgcgaagacgcacaattcgattaccttgtcttgg
agcgcatcgacggataatgtcggagtgacgggctacgagatttaccgcaatagcgccaag
gtcggcacatcggccacaacgacgtatgtggataataacctggcagcggcaaccgcatac
acttatatgctcaaggcttatgacgctctaggtaacacgtcggaggcaagcagcgagctg
caggttacaacgaacgcggctccgctgtcaaacaaggcgacgatttactacaaacgcgga
tatagcaccccatatttccattacgcaccgaccgggggggcttggacggcagtaccggga
atcgccatgcaagcgtcggagtttacgggttacagcgtgatcaccgtcgacatcggcacg
gcaaccagcttggcagccgtgttcaacaatggcggcggcacatgggacaacaacggcggt
aaaaattattcattccagcaaggaatctggactttcgcaaacggtacgatcacggcaggt
cctcctgaaggttctatcgtagatacattagcgccgaccgagccaaccaatgtgcaggcc
accgcgaagacgcacgattccgtaaccttgtcttggagcgcatcgacggacaacgtcggg
gtcaccggctatgaaatttatcgtaacggcttcaagatcgggacttcgacacagacgacg
tttacggataccggcctgactgcgcaaactgcctatacgtatacggtcaaggcttatgac
gctaaagcaaacatgtctgtagcaagcagcggattgctagtaacgacgaatgcggttcct
ttgtcaaatacggcgacgatctattacaagcagggctttagttctccgtatatctattac
atgcctacaggcggtgcctggacggcgctgccgggcgttgccatgcagccgtcagcggaa
tacgccggttacagcgtgattaccgttaacctgggcacagcgacaagcatgaaagcaacc
ttcaacaacggcagcggcacatgggacaacaacggcggaaataactatacgttcgagcaa
ggaacctggacgttcgagaacggcaaaattacgtccggcgcgccggtattgccgcaaacc
caaagcctgacgatcaagcttaccgttcctatgactacggcagcgaacgattcggtctat
atcgcaggctcgttcaataactggaatcctgcggacagcaactataagcttacgccaaat
agcgatggcacatactctatcactatgagcttaatggcaggcacgacgatccaatacaaa
ttcttaagaggatcgtgggcaacggtcgaagcgaattcgaacaattcggatattgcgaat
aggtcatatacgatgccgaatagcgcgcaaaccttaacccaaacggttgtaaaatggaaa
gacaagtag
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