Cohnella cholangitidis: FPL14_23875
Help
Entry
FPL14_23875 CDS
T07708
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cchl
Cohnella cholangitidis
Pathway
cchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPL14_23875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cchl03019
]
FPL14_23875
03009 Ribosome biogenesis [BR:
cchl03009
]
FPL14_23875
Enzymes [BR:
cchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPL14_23875
Messenger RNA biogenesis [BR:
cchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FPL14_23875
Ribosome biogenesis [BR:
cchl03009
]
Prokaryotic type
rRNA helicases
FPL14_23875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_19
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QMV43869
UniProt:
A0A7G5C3T5
LinkDB
All DBs
Position
5206793..5208418
Genome browser
AA seq
541 aa
AA seq
DB search
MSTFAEFGLESDVLQAISEMGFEEATPIQAKAIPVAIAGKDMIGQAQTGTGKTAAFGIPL
ISKIAASEDRIVALIMAPTRELAIQVSEEIEKLGRFKGLRSLAIYGGQDISRQIRSLKRR
PQIIIGTPGRLLDHINRKTIRLDDVRTVVLDEADEMLDMGFMEDIQSILKLVPEERQTLL
FSATMPANIQKLAQQFLREPEHVKVESKLLSAPLIQQYYVEIQERMKFDGLCRLLDMEPP
ELAIIFGRTKRRVAELSEALMKRGYACDGLHGDLSQNQRDTVMRKFRDGSIDILVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTSWSFVTAREIDHLHFIEKVTR
HRISKKLLPTLSEALEGKQKLIAERIMDTVRSEEEVNPFKWVAMQLLEQYDSVELLAAAM
KMLTGDKKDVNIELTPEDPIRSKKRKFEGNRGGGYGSSSSGRRYGSGGGSGQGSWRQGQG
RSDSRGGSGYGGGQRKPYNGGNRSSSNRDDSSYRDSNRGGRPERREEYRGSRSQSEDFVK
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacatttgcagagtttggtttggagtccgacgttcttcaagccatatcggagatg
ggatttgaagaggcgaccccaatccaagcgaaagccattccagttgccattgcaggcaag
gatatgatcgggcaagcccagacgggtactggtaaaaccgcagcgttcggtataccgctg
atcagcaagattgccgcatcggaagatcgcattgttgccctgatcatggccccgacacgc
gagttagctattcaggtgtcggaagaaatcgagaagcttggacgtttcaagggactgcgt
tccttggctatatatggcggtcaagacatctcacgtcagattcgctcccttaagcggaga
ccgcaaatcattatcggaacaccgggtcgtttgttagaccacatcaaccggaaaacgatc
cgtctagacgacgttcggacggtcgtattggatgaagcggacgaaatgctggatatggga
ttcatggaggacatccagtccatcctgaagctcgttccggaagaacgccaaacgttgctg
ttctcggcaacgatgccggcgaacattcagaagctcgcacagcaatttctgcgcgagccg
gagcatgtcaaagtagaatcgaagctgctaagcgcgcctctgattcagcagtattacgtt
gaaattcaagaacggatgaaatttgacggactgtgccgtttgctggacatggaaccgcct
gaattggcaatcatcttcggtcgtaccaagcgtcgcgtagctgaattgtccgaagcgctc
atgaagcgcggatatgcatgcgatggattgcacggcgatttgtcgcagaaccaaagggat
accgttatgcgcaaattccgcgacggcagtatcgacattcttgtcgctaccgacgttgcg
gctcgcggactcgacgtatcgggcgtaacgcacgtaatcaacttcgatttgccgcaagac
ccggaaagctacgttcaccggatcggccgtaccggccgtgcgggtaaagaaggaacatcc
tggtcgttcgtaacggctcgcgaaatcgatcatcttcatttcatcgagaaagtaacgaga
caccggatttccaagaagttgctgcctacgctttcggaagcgttggaaggcaaacaaaaa
cttatcgcagagcgcattatggacaccgttcgctccgaagaagaagtcaatccgttcaaa
tgggtggctatgcagcttctcgagcaatacgattccgttgaactgctcgcggcagcaatg
aaaatgctgaccggcgacaagaaagacgtaaacatcgagcttacgccggaagatccgatt
cgttccaagaagcggaaattcgaaggcaaccgcggcggcggttacggcagcagcagcagc
ggtcgtcgatacggaagcggcggcggaagcggccaaggctcttggcgtcaaggacaagga
cgcagcgattcccgcggcggttccggttatggcggcggtcaacgtaagccttacaacggc
ggcaatcgttccagcagcaatcgcgatgatagcagttaccgggattcgaatcgcggcggt
cgtccagagcgccgggaagaataccgcggaagccgctctcagagcgaagatttcgttaaa
atctaa
DBGET
integrated database retrieval system
