Coprinopsis cinerea: CC1G_01597
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Entry
CC1G_01597 CDS
T01275
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cci
Coprinopsis cinerea
Pathway
cci03410
Base excision repair
cci03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CC1G_01597
03450 Non-homologous end-joining
CC1G_01597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_01597
Enzymes [BR:
cci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CC1G_01597
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
CC1G_01597
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CC1G_01597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DPBB_1
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_5
BRCT_2
LIG3_BRCT
PDE8
Motif
Other DBs
NCBI-GeneID:
6010424
NCBI-ProteinID:
XP_001833920
UniProt:
A8NI67
LinkDB
All DBs
Position
10
AA seq
1047 aa
AA seq
DB search
MAARNLKKFVEGQDNIMSLPDEDVGEYFQRTRTVWKPPSHGEASPVRVTPSPAFASRKRG
LSSPGGTKKKRRMSTDQLPNEEITKLTLSPIPPGSKPVQTAAPKNGALMAQPAKLQPIRT
TAQSGAKQPQLKATKPSPEEGKKASPIVVQNEVCSSPIEDPSVVLSAAKERPRNRAIPSE
SSSLLLEVRERVAAHRASKSRMKTVPLDRQDTAPVIHAERSIDGSSVIYVSSSESSRASS
PAPDITMKSQVKGKVANSVSGKKTPKVTTSKGKNKKDQPKMRPPEYAQYIQTEAAAGNLP
KRPLTGFKFLDGYQIFYTGGDMRNASETTRARMELIVRYGGTLIPTYDPNVVTHIVTDAP
ETTTVNALGLKRLRDIPDRIPTVKWSWVTWGIGKAASCTKDELYEKLRDHLWQHAAFSDR
LEAGMKATKSFIRAKSKGKGKEKARLVEEGSSPVSDSTQEPVAADEYESQVSANDVLSVA
IPTEARPGGLPSPPASQQLGPAFSEASSSRAKLAHDPLAEFYDQAKAEQMKEKQRVVSEA
ESDEEDVIPEIQPRKRGWTCDNPEAQITDCPNQDVIDKGRPHTQYSFACKLTPSIQLTEL
MKLHEAKPSEDDRWRVFAYSKEYAPWKKQVKFAIVEILETGKLRRIEYERTGDVVAAALF
QGIYGVGRSTAYKWYNAGCRTLDDIRQGKGGVKLSAVQEIGLKYYDDINSRMPREEAKAI
YDIIKPIGVLGRLIQELHAVGVLTEDLALPEEIDDLEGVYRGLCRLPNVPNSKRRRIDFL
TVPYHSRGAALIYYTFNRAMRLKANVMGYSLNQRGLFGNVVRDPRDRRVKLNRVRTQTMT
TNVIIRLALLYSQVSGTTKVTIQIDSLARFETRPRGRDHPTHRRRPPNTDHIPIFLFAPC
STTTLQLRQEAPRLYTPTPPATRTIQTMHYNKILTVLFTTLFAFACHGVNANSHHGDATW
YTPGLGSCGEENTESQYVVALSLEENSGHHRCHQHITIHYHGRSVRALVVDSCPGCSRYS
LDLSPAAFEALAPLGVGRIKVNWNYSS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgaaatctcaagaaatttgtggaaggacaagacaatattatgtctttgcca
gacgaggacgtgggcgaatatttccagcgaactcggaccgtttggaagcctcctagccac
ggggaagcaagtcccgttcgggtcacaccttcgcccgcattcgcctcgaggaaacgggga
ctgtcttctcctggtggtacaaagaagaagcgacgcatgtcaactgaccagttgccgaat
gaggagataacgaaactgacattgtccccgatccctcctggctcgaagcctgtacagact
gcagcacccaaaaatggtgctctgatggcccaaccggcgaagctgcagcccatcaggacc
acagcgcaatctggcgccaagcaaccccagctcaaggctacgaaaccctcgcctgaagaa
ggcaagaaagctagtcccattgtggtccagaacgaggtctgcagctcgcctatcgaggat
cctagtgttgttttatccgctgcaaaagagaggccccgcaatcgggcgattccctcggaa
tcaagtagcttgcttttggaagtacgggaacgcgtggctgcgcatcgtgcttcgaagagc
cgaatgaagactgtgccccttgacagacaggacaccgcccctgtgatccacgctgaacgc
tccattgacggaagctccgtcatctatgtgtcatcttcagagtcctcccgagcaagctcg
cctgctcccgatatcaccatgaagtcacaggtgaaaggcaaggttgccaattccgtctct
gggaagaagacgccgaaggttacaacctccaaaggaaagaacaagaaggaccaaccgaag
atgagaccgccagaatatgcccagtacatccaaactgaggctgcagcaggcaatttgccc
aaacggccgctgactggattcaagtttctagatggctaccaaatattttacactggcgga
gacatgcgcaacgcctcggagaccacgagggcccggatggagctaatcgtccgttatggc
gggaccctcattccaacttacgacccgaacgtggtcacccatatcgttactgacgcccca
gagaccacaactgtgaacgcccttggactgaagagactgagggatatccctgatcgcatc
cccacagtcaagtggagctgggtaacttggggcatcgggaaggctgcatcttgcactaaa
gacgagctctacgagaagttacgagatcacctctggcagcatgcagctttttctgaccgc
cttgaagcgggaatgaaagccacgaaatctttcattcgggcgaagtccaaggggaaaggc
aaggagaaagccaggttggtcgaagaaggctcaagtccggtctccgactcaactcaggaa
ccagtggctgccgacgaatatgaaagccaagtatctgccaacgatgttctttcggtagct
atacctactgaggccaggcctgggggactgccttcgcctcccgcatcgcagcaactcggg
ccagccttcagcgaggcgtcatcctccagggcgaaactcgcccatgacccactggccgaa
ttctacgaccaggcaaaagcagagcagatgaaagagaaacaacgagttgtatctgaggcc
gaaagtgatgaagaagatgtgatccctgagatccaacctaggaaaaggggctggacttgt
gacaatccagaagcccaaattacggactgcccaaaccaggacgtcattgataagggacgc
cctcatacccaatactctttcgcctgcaagcttaccccttccattcagctaacagagcta
atgaagttgcatgaagccaagccctcggaagatgatcgctggagagtgtttgcatatagc
aaagaatacgctccttggaagaagcaagtaaaattcgcgattgtcgagatcctcgagact
ggcaaactgcggcggatcgaatacgagcggactggagacgtcgtggcggcagccctcttc
caaggcatctatggcgtcggtcgctccactgcatacaagtggtataacgcggggtgtcgc
accctcgacgatatcaggcaaggaaagggcggggttaagctctctgctgtgcaagaaatt
ggcctcaagtactatgatgacattaattccaggatgcctcgagaggaagcgaaggccatt
tacgatatcatcaagcccataggagttcttggtcggttgatacaagagctgcacgctgta
ggcgttctcaccgaagacctggcactccccgaagaaattgatgaccttgagggcgtttat
cgaggactttgccggctgccgaacgtcccaaactcgaagcggcgcagaatagacttcctc
actgtaccttatcactcgagaggcgctgccctgatctattacacattcaacagggcgatg
cgtctgaaggcaaatgtaatgggctactcgctcaaccagagaggcctgtttggcaatgtg
gtgcgagatccgagagaccgtcgcgtcaaacttaatagagttcgcacccagacgatgact
accaatgtcatcattcgccttgccctcttatactcacaggtatccgggacgaccaaagta
acaattcaaatcgactccctcgctcgcttcgaaacccgcccccgaggccgcgatcaccca
acccacaggcgccgaccgcccaacacagaccacatcccaattttcctcttcgccccttgt
tcgacgacgaccctccagttgcgacaagaggcgccccgactctacacgccgactccacca
gcaacgaggacgatccagacgatgcactataacaagatcttgacggttctgttcaccacc
cttttcgcgtttgcgtgtcacggagtgaatgcgaattcccatcatggagatgcaacttgg
tatactcccggtctgggtagttgtggagaagagaacacggaatcccaatatgtcgtcgct
ttgtctctcgaggagaacagtggacatcatcggtgtcaccagcatatcactatccactac
cacggccgatccgtacgagccctcgtcgtcgactcgtgcccaggatgcagccgatacagc
ctcgacctgtctccagcagcattcgaagcactggcacccctaggcgttggacgtatcaaa
gtcaactggaattatagttcatga
DBGET
integrated database retrieval system