Coprinopsis cinerea: CC1G_14135
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Entry
CC1G_14135 CDS
T01275
Name
(RefSeq) histone deacetylase clr3
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cci
Coprinopsis cinerea
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cci01009
]
CC1G_14135
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_14135
04131 Membrane trafficking [BR:
cci04131
]
CC1G_14135
03036 Chromosome and associated proteins [BR:
cci03036
]
CC1G_14135
Enzymes [BR:
cci01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CC1G_14135
Protein phosphatases and associated proteins [BR:
cci01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CC1G_14135
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CC1G_14135
Membrane trafficking [BR:
cci04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CC1G_14135
Chromosome and associated proteins [BR:
cci03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CC1G_14135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
9379627
NCBI-ProteinID:
XP_002911602
UniProt:
D6RLC0
LinkDB
All DBs
Position
3
AA seq
692 aa
AA seq
DB search
MSVSQLPQLDSMDVDNPLNVRGPSTSTNADSNIAGPSNLTRYLPNGLPRASSLPVSFGNL
SVGYVYSADMMQHFNEEGHPEQPARIKRIWDLLVAKGLTEKMRRIDIRKVKKEEAMLVHS
EDHWDKVIQLQYMDDQQRLDSAEYYERMSLYVMKGTTPAALLSCGGVIEASLAVARGLVQ
KSFAIVRPPGHHAEPDEHMGFCFFNNVAVAARVVQQLTPLKKILILDWDVHHGNGTQRAF
DDDPSVLYMSIHRYESGHFYPCGPFGSLESCGKGPGEGFSVNVPWPRAGMEDADYLYAFQ
KVIMPIAMEFAPDLVIISAGFDAADGDDLGECHVTPKGYAHMTHMLAGLAGGKMVVALEG
GYNLDAISDSALAVTEILLGQAPPQIDPMIASEDATETVWLVAKHLSRYWKSLDPKACEP
REQVEEISYSIPEILKAHRQHYLYTNHDMMEIPLMTAELDQRFSSQVMCTPDMLDNDTIV
LFVHEFGNLRIELESSATCDVNLHRSYLVDFSKELISWIDTEQFALIDANLFPKPTEIQQ
TRRATLESDLVREVILYLWDNYIQLSKASRVILIGHGPGCRAVAELLTRRATGVMKLVTT
VIQIVGLQHSACAPTGFEDIRTWYKSHSAIILPDNHPMSSGRELAKEIRKHGRMIYVEET
QPLKLVMKALPAVQQIIRESNPPRPDANGIER
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttctcaactacctcaactggactcaatggacgttgacaaccctctcaacgtc
cggggtccttccaccagcaccaatgccgacagcaacattgcaggcccttccaacttgacg
cgctacctacccaatggcttgccccgggcttcttcgttgcctgttagctttgggaacttg
agtgtcggctatgtctactctgccgacatgatgcagcacttcaacgaagaaggacaccct
gaacaaccagccaggattaaacgcatatgggatctactcgtcgcaaagggcttgaccgag
aagatgcggcggatcgatattcgaaaggtgaagaaggaagaagcgatgctagttcatagt
gaagaccactgggacaaagttattcaattacaatatatggacgaccaacaacgtttggac
tctgcggaatactacgaacggatgtcgctttatgtgatgaaaggcacgacaccggcggct
ctactcagttgtggaggagtaattgaagcttccctcgctgttgcaagagggctcgttcaa
aaatccttcgctatcgttcgaccaccaggtcaccacgccgaaccggatgagcacatgggt
ttctgcttcttcaacaacgttgcagtagctgctcgggtcgtgcagcaactaacacccctc
aagaagatactgattttagattgggacgtgcatcatggcaacggcacacagcgcgctttc
gacgacgacccctctgtcctttacatgtccattcatcgatacgaaagtggacatttctat
ccttgtggaccatttggctcccttgaatcttgcgggaaaggcccaggtgaaggattctct
gtgaacgtgccatggccaagagctggaatggaagatgcggactatttgtatgctttccaa
aaggttatcatgcccatagctatggagtttgcgccagaccttgtcatcatttctgctgga
ttcgatgcagctgacggagatgacctgggcgaatgccatgtcacaccaaagggctatgca
cacatgacccacatgctggctggtctagcagggggaaagatggtagtcgcgttggaggga
ggctataacctggacgccatttccgactcagcactggctgtgacagagattctgttaggg
caagcgccaccacaaatagacccaatgattgcatcggaggacgcgacggagacagtctgg
cttgttgctaagcatctcagcaggtactggaagagcttggatcctaaggcctgcgaacct
cgagaacaggtggaggaaatcagctattcgataccagaaatcctgaaagcacatcgacaa
cactatctctataccaaccatgatatgatggagattcctttaatgacggcggagcttgat
caacgattttcctcacaagtaatgtgcacgcctgatatgcttgataacgacaccatcgta
ttattcgttcatgaatttggtaatctacgaatagaactcgaatcatctgcgacatgcgac
gtcaatctccatcgatcgtacctcgtcgacttctccaaagaacttatttcttggatagac
accgaacaattcgccctcattgacgccaacctcttccccaaacctaccgaaattcaacaa
actcgtcgggcgacattagaatctgacctcgttcgagaagtcattttgtacttgtgggat
aactacatccagctatcgaaagcctcgagggtcatcctaattggccatggtccaggctgt
cgtgctgtggctgaactacttacccgtcgagcaacgggagtaatgaagctcgtaacaact
gtcatccaaattgttggattgcaacatagcgcctgtgctcctaccggtttcgaagatatt
cggacgtggtataagtcgcattccgcaattatactccccgacaaccatccgatgagctca
ggccgggaattggccaaagagattcgaaaacatggtcgaatgatctatgttgaggaaact
caacctctcaagttggtcatgaaggcgttacccgccgtccaacaaatcattcgcgagtcg
aatcccccacgaccagatgccaatggaatcgaacgatga
DBGET
integrated database retrieval system
