Cephus cinctus (wheat stem sawfly): 107268524
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Entry
107268524 CDS
T07523
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107268524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107268524
03009 Ribosome biogenesis [BR:
ccin03009
]
107268524
03036 Chromosome and associated proteins [BR:
ccin03036
]
107268524
Enzymes [BR:
ccin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
107268524
Messenger RNA biogenesis [BR:
ccin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107268524
Ribosome biogenesis [BR:
ccin03009
]
Eukaryotic type
90S particles
RNase
107268524
Prokaryotic type
rRNA processing factors
107268524
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
107268524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-GeneID:
107268524
NCBI-ProteinID:
XP_015596858
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MANPPNNNGQSLFWNFGATRPQNVGYYNVPPPNFPPPNLNQPPPSAYNIPPPSLPESKPL
PTAVVSFHSNLPSSSSDYPNAPNTYYSQFPYQNQQEVPYNQNLYVPGYSQVPGANFNCNW
NSRNPYRNNDGNSWTQYLTPVNWNANAPQSESNPHWNDGNSIQNDDKKSIPQRFEVPQYS
RKTEWRFGEKTSHDSTGGRRRSRSSEGRSRSSRSSCRSRYDDERHKYNKYSKEKSNAREY
SYDGGDVDRKPSHRRNGSHSSWSSAATSERMNTGNRSRKRSRSQESHTSRSSPTSSNVSV
KHKGLSERELVLEKYRRNYCATSKDMERKMDELCAMGPEGIMENERKVWTRTAPADLYYV
RDENNPKIMKGTTKLRELCDIFKKLLVERSTAARALQPPYEPPPRKTRARLCRHKSEACS
SSSSDSDSSMDEDDRTMEELMAKKQHPQRLHPEMWFNDPGEMNDGPLCRCSAKSRRSGIR
HGIYAGEGAIAKCEMNSNNADKLYHYRITISPPTNFLTKTPTIIKHDEHEFIFEGFSMLS
HFPLVKLPTCKVIRFNIEYTILYIDEKLPENFTIQELDYFQQYLFNEILELVDFDLRAAQ
DKSGCGQFHFMPRFVRDLPDNGQEILSMNEVLNYLIKSSTLLIEPEHLPRLVEMHQYKWQ
NFADEVKGMVVTYPGKKPCSVRVDQLDRNQGEQPPGVVSYPEIVHFGIRPPQLSYAGNAD
YQKAWRDYVKFRHLLANMPKPSFEDKRKLEAKENKLQELRTQSKMKRDVIVDVSSEGFYK
TGIMCDIVQHAMLIPVLVCHLRFHKSLDILERTLGYEFKNRYLLQLALTHPSYRENFGTN
PDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFGARRETESSIAHNERLE
FLGDAVVEFLTSIHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLNLEQYMLYAHGSD
LCHDLELRHAMANCFEALMGSLFLDGGIEVADRVFGETLFKDEMDLSKVWVNYPKHPLQE
QEPTGDRQWIPSFELLQKLMKFEESIGVEFTHIRLLARAFTDRSIGYTNLTLGSNQRLEF
LGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGMTQYALYGNPKAE
LKTKDRADLLEAFLGALYVDKGLEYCHVFCDVCFFPRLQDFIMNQDWNDPKSKLQQCCLT
LRTMDGGEPDIPVYKVIECKGPTNTRVYTVAVYFQGKRLAKASGHSIQEAEMNSAKEALE
KSQDLFPQLDHQKRVIAKSMKMQHWPNRQKLRGKPTKPSERSDDSDSSQQRKRRSRSRER
DLPDRRSRDRYDSVDRRWKDLDRSGDRHRKHRSPARKNRSSTERTTQRELTDYDNSRERE
YKAEVLERHGSSGGLEMMEQNDSFERDSVQDRDGNLDRHCQDGIRKRKRSVEKDTSSSDD
DNVPEQYKTSNLKSHSGKKTRS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcctcctaacaacaatggccaatcattgttttggaattttggagcaactcgg
ccacaaaacgttggatactataatgtaccacctccaaattttccaccaccaaatttgaac
caaccaccaccttccgcatacaatattccaccaccatcattacctgagagcaaaccttta
cctactgcagtagtatcatttcattcgaatctaccatcttcatcttctgattatcctaat
gccccaaacacatactactctcagttcccatatcaaaatcaacaagaagtaccatacaat
caaaatctatatgttcctggatattcgcaagtaccaggtgccaattttaattgcaattgg
aatagcagaaatccgtatcgcaataatgatggtaatagctggactcaatatctaacgcca
gtaaattggaatgcaaatgcgccacaaagcgaatcaaatcctcattggaacgatggtaat
tctatacaaaatgatgataaaaaatcaataccacaacggtttgaagtgccacaatatagt
aggaaaactgaatggagatttggtgagaaaacatcacatgacagcacaggagggagacga
cgttccaggagttcagaaggtcgatcccgtagtagtagatcatcttgtaggtcccgctat
gatgatgagaggcacaaatacaataaatacagcaaagaaaaatccaatgccagagaatat
tcttatgatggtggtgatgtagatagaaaaccatcacacagaagaaatggtagtcattct
tcctggtcaagtgctgctacatctgagaggatgaatacaggcaacaggagcagaaagaga
tccagatcacaagagtcccacacttccagatcctcccctactagtagtaacgtttcagtg
aaacataagggtcttagcgaaagagaacttgttttagaaaaatacaggcgaaactactgc
gctaccagtaaagatatggagcgcaaaatggatgaattatgcgctatgggtcctgaaggt
ataatggaaaatgaacgaaaagtttggacgcgcacagcacccgcagatttatattatgtc
agagatgaaaataatccaaaaataatgaaaggtactacaaaacttcgtgaactctgtgat
atcttcaagaagttgctcgtagaaagatcgacagcggcacgtgctctacagcccccctat
gagccaccaccaagaaaaacacgagctcgactctgcagacacaaatctgaagcttgtagc
agctcttcttcagatagcgacagttcaatggatgaagatgatagaacaatggaggaatta
atggcaaaaaaacagcatcctcaaagactacatcccgaaatgtggttcaatgatcctgga
gagatgaacgacggaccactatgtagatgcagtgcaaaatctcgcagatctggtatacga
catggtatctacgctggggaaggtgcaattgctaaatgcgaaatgaattccaacaatgct
gataaactttatcactatcgtataaccattagtccccctacaaatttcctcacaaagaca
ccaacgatcatcaaacatgatgagcatgaattcatatttgaaggtttctctatgctttct
cattttccattagtcaaactaccaacatgcaaagttatccgcttcaatattgaatacact
atactttacatcgatgagaagttacctgaaaacttcacaatacaggagttggattatttt
caacaatatttatttaacgagattttggagctcgttgacttcgacctaagagcagctcag
gataaatctggctgtggacaatttcacttcatgccgagattcgtgcgtgacttacctgac
aatggccaagagatattatcaatgaacgaagtcttgaattatttaataaagagcagcact
ctcttgatcgaacccgagcatctacctagattagtagaaatgcatcagtacaagtggcag
aattttgcggatgaggtaaaaggaatggtggtgacgtatcctggaaagaaaccatgtagt
gtcagagtggaccagcttgataggaaccagggtgagcagcctcctggagtagtatcgtat
ccagaaatagtacacttcggaatcagaccaccacagctgagctatgctggaaatgcagat
tatcaaaaagcttggcgcgattacgtaaagttccgtcatcttttggcaaacatgccaaaa
ccatcgttcgaggataaacgtaaattggaggcgaaagaaaacaaacttcaagagttacgt
actcaaagcaagatgaagcgggacgtgatagtggacgtttcttcagaaggattttacaag
acaggaataatgtgcgatatcgttcagcacgctatgttgattcctgtattagtttgtcat
ctaaggtttcataaatccctggacatactggagcgcaccctgggatatgagtttaaaaat
agatacttattacagctggcacttactcatcctagttatcgtgagaattttggtaccaat
cctgatcatgcaaggaattcattaaccaactgtggaataagacaaccagaatatggcgac
cgtcgtatccattatatgaatacccgtaagcgtggaataaacacattgattaatataatg
tcaaggtttggagcgagacgcgaaacggaatcgtcgattgctcacaatgaacgattagaa
tttctgggcgatgctgttgtcgaatttcttacatctatacacctgtttcacatgtttcct
gatcttgaagaaggtggtctagcgacttatcgagcagctattgtgcagaaccaacatctt
gctgtcctggccaagaaacttaatctagaacaatatatgctctatgctcatggaagtgat
ttgtgccatgatcttgaactgagacatgccatggctaattgtttcgaagctcttatgggt
tcattattccttgacggaggcattgaagtcgctgatagagtcttcggtgagactttattc
aaggatgaaatggatcttagtaaagtctgggttaattatcccaagcatcctctacaagaa
caggaaccgactggggatagacagtggatacctagtttcgaattattacagaaacttatg
aaattcgaagaatccattggcgtagaattcacccatattcgattattagccagagcgttc
accgatcgtagcattggctatacgaatttaacattaggttctaatcaacgattagaattc
ttgggtgatactgttctgcaattaatagtatccgaatacttatacaaattctttccagaa
caccacgaaggtcatctatcactcctccgtagttctctagttaacaataaaacacaagct
gttgtgtgcgatgatcttggtatgacgcagtatgccctttatggaaatccaaaagcagaa
ttgaagacaaaagacagagctgatttattagaagcatttttgggagctctttatgtcgac
aaaggattagagtattgtcacgtattctgtgatgtttgctttttccctcgtcttcaagat
ttcataatgaatcaggattggaatgatcccaagagcaaattacaacaatgctgcctgaca
ttgagaacaatggacggaggcgagcctgacattcccgtctacaaagtgattgagtgcaag
ggtcctacaaacacacgagtctacacggtcgccgtttatttccaagggaaacgcttggct
aaagcatcaggccatagtattcaggaagctgagatgaattcagctaaagaggctcttgaa
aaatcacaagatttgtttccccaattggatcatcaaaagagagtaattgcaaagagcatg
aagatgcagcattggccaaacagacaaaagctgcgtggcaaaccaacaaaaccaagtgag
agatctgatgactctgactccagtcagcagcgtaagcgacgtagtcgcagtagagaacgg
gatcttcctgataggcgatctagggatcgttatgatagtgttgatcgcagatggaaagat
cttgataggagtggcgataggcataggaagcacaggagtccagctagaaaaaatcgtagt
agtacagaacgaacaacacagagggagttaactgattatgataactctagagaacgtgaa
tataaagcggaagttctagagaggcacggtagttctggcggacttgagatgatggagcag
aatgattcttttgaacgtgacagtgtacaggatagggatggcaatttagatagacattgc
caggatggtattaggaagcgaaagagatcagtagaaaaagatactagcagtagcgatgat
gataatgttcctgaacaatacaaaactagtaatctcaaatcgcactctggtaagaagacc
agatcttga
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integrated database retrieval system
