Cephus cinctus (wheat stem sawfly): 107270383
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Entry
107270383 CDS
T07523
Name
(RefSeq) DNA repair protein RAD50 isoform X1
Organism
ccin
Cephus cinctus (wheat stem sawfly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_29
Cadherin_3
AAA_16
AAA_13
AAA_5
RE_R_Pab1
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
107270383
NCBI-ProteinID:
XP_015600818
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MVKQSFLFPIVFCLVQFTRHSLLGVSHSHITVYSNFYLIKCKCKFLEVNSIGHQILPSSS
TKQEKMSRVKKLSIRGIRNFDHDTETEIRFMRPITLIVGPNGTGKTTIIEALKFATTGAY
PPDSSAGKAFVHDPVTTTTCIVRANVKLEVVDVSRNRVTISRAMELSRFDKRVIFKTLDS
TITKESIDSGKPISITNRCANVNTEIVSAMGVSNAILNYVIFCHQDDFDWPLSEAKILKK
RFDEIFDTEKYDKAVESLTKYTKTLETENRFLVAEKKTCEINLIRTEEKEQELSNAKERL
ESSKSKISVIEKSLVPVTQRMLEIKDLDSQYGKMKSEIEVQRMQHTHVKKQIVNLKSNIE
EMFQGTVEELNEELVSYADILNKKKEEAEELEERMKEIKTEESNIRKLLDEKRLAVGTLQ
QQVKDQDERIVIRNKLLNDALSAWNLDTISSDVTEIEVIALSKRLEQKMCEIKLEVGNNQ
INRESIEKQLQKEVDTLRSEKTKIESEMNLKEVEVADIVEELNTLRTRIKQVSAAAKKLD
DLEKELQKANDKIELLAKKFDVDSVKSKIQNEIRKKAKLEGQLNKVDDEVSSLHKQSALQ
AELELNKSMVMTKETEIQNLRNKYESELKKLLGTTELPEGTLKNRLSNIQRVLMGRINNL
NQELQSEQNRVSSLETTIKHIEQELKHKIATLKSDKEKISFHCEYENYEDVVLSQSEVVK
ELQKKRGMYAYRGVAYKDYLKQLEEEDPSCPLCHRDFQSTLEVKNLITEIREDMGPSRLQ
SCEEELKIQQQKYESLLQLKPIVEKVAHVEGVELKRLRVQLEERKKQLADSCKKLEMLRV
STLDPENKLSACKDMVGDVALWDKYADELVKLNRTLASIKKRIFDAGVTSERTIQEAQIE
RDSLKQQLKEVSKEIESMQTSLNLHNEELQQARHKRNELYEEQLRIQSEMQKLQQLRDKQ
NDLYAREISLGESVQNLREKLSRADEQLTSGIQELEKTKTKHKEQREVEERKIHEGSRRL
HELTNTQKQIDDFEQRGVHKKLLSAEQQMKRYENSCEELKITKADLEKRIDQIKKDVMRQ
EVRKRELVDNITLRQKEEELKSLEQEILKIEVSMKKMQHELLIQEYKKLNEKEEKLLREK
NIASGKQEELERSVAQMQQELKNEVYRMARTNYKKKCIELEVQQEIVVNLKEYVKALDRA
MIEYHEERISTVNKIIKHMWRTVYKGTDTTGIEIKAEATEAGDKRRQFKYKLVQRKHGAE
MDMKGRCSAGQRVLASIIIRMALAETFCKNCGVLALDEPTTNLDEQNAESLADAITTIVK
ARSKYQKNFQLIVISHDENFVKKLTKLNRSGIFYRLYRDSRGLSSIKRSRDDHFTMPLRD
IDEDSSDYSDQEEKVDGALNSQTTAPVKAPSRKRKYQFNVDKNVPPRKPKKIHTFEI
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacaaagctttttgtttccgatagtgttttgcctcgttcaatttactcgtcat
tcgcttctgggcgtcagtcacagtcacatcacagtgtattcaaacttttatctaataaag
tgtaagtgcaagtttcttgaagtgaattcaatcggacatcagatacttccatcttcatct
acaaaacaagaaaaaatgtctcgagtaaagaagttgtctattcgtggtattcgtaatttt
gaccatgatactgaaacggagatacggtttatgcgacctattacacttattgtgggacct
aatggtacaggaaagacaacaattattgaagccttgaaatttgctactactggtgcttat
cctcctgattctagcgctggaaaggcatttgtccatgatcctgtaacaacgactacttgt
attgtcagagctaatgtcaagttggaagtagtagatgtcagtagaaacagagtaacgata
tccagagctatggaattatctagatttgacaaacgagtcatattcaaaactttggatagt
actataactaaggagagtatcgattcaggaaagccaatttcaataacaaatcgatgtgct
aatgtgaatactgagattgtctcagctatgggtgtttcaaatgcaattttgaattacgtc
atattttgtcatcaagatgattttgattggccactgtcagaagcaaaaattttgaaaaaa
agatttgatgaaatatttgacactgaaaaatatgacaaagctgttgaatctcttacaaag
tataccaaaaccttggaaactgagaatcgttttttagtggctgagaaaaaaacatgcgag
attaatttgataagaactgaagagaaagagcaggagctaagcaatgccaaagaaaggttg
gagagttccaagagcaagatttcagtaatcgaaaaaagtcttgtgcctgtgacacaaaga
atgttggaaataaaagatttagatagtcaatatggaaagatgaaatctgaaatagaggtt
caaaggatgcagcatacacacgtgaaaaaacaaattgtgaatctgaagagcaacattgaa
gaaatgtttcaaggaacagttgaggaattaaacgaagaattagtttcatatgctgatata
ttaaacaagaaaaaagaagaggcagaagaacttgaagagagaatgaaggaaatcaaaaca
gaggagtcaaatattcgaaaattacttgacgagaagagacttgcagttggtacattacaa
caacaagtaaaggatcaagatgaaagaatagtcatacgtaacaaattattgaacgatgct
ctctccgcttggaacttggacacaatttcgtccgacgtaacggaaattgaggtcatagct
ctatcaaagcgattggaacaaaagatgtgcgaaataaaactggaagtgggaaacaaccag
attaatcgagaatctattgaaaagcaactccaaaaagaagttgatactttgaggtctgaa
aaaacaaaaatcgaatcagaaatgaacctgaaggaagtagaagtagctgatatcgtagag
gaattaaatacccttcgtactcgaataaaacaagtcagtgcagctgcaaaaaaattggat
gacctcgagaaggagcttcagaaagcaaatgataaaattgaattactcgctaagaaattc
gatgtcgattcagtcaaatcaaagatccaaaatgaaataagaaaaaaggctaaattggaa
ggccagttaaataaagtcgatgacgaagtgtcgtctttacacaagcaaagtgcattacaa
gcagaattagaattgaataaatctatggttatgaccaaggaaactgagatacagaattta
aggaataaatatgaatctgaattaaaaaaattacttggcacaacagaattacctgaggga
acactaaagaacaggcttagcaatatacaacgagtattgatgggccgtatcaacaatttg
aatcaagaactacaatcggaacaaaatcgtgtttcatctttagaaacaactataaagcat
atcgaacaagaactaaaacataaaattgcaacactgaaatctgacaaggaaaaaatttct
tttcactgtgagtatgagaattacgaagacgttgtattgtcacaatctgaagttgttaag
gaattgcaaaaaaaacgtggaatgtatgcatatcgtggtgtcgcgtataaggactaccta
aaacaattggaagaggaagatccttcctgtcctctgtgtcatcgggattttcaatctact
ttggaagttaaaaatcttattaccgaaattcgagaggatatgggacccagtcgtttacag
tcatgcgaggaggaattaaagattcaacaacagaaatacgaatctttgcttcaattgaaa
ccaatcgtggaaaaggtcgcacatgttgagggagttgaattaaaaaggctaagagtccag
ctggaggaaagaaaaaaacagttggcagattcttgcaagaaacttgaaatgctgagagtt
tcaacattggatccagaaaataaattgtctgcgtgtaaagacatggttggcgacgttgca
ctttgggataaatatgcggatgagttggtcaaattgaatcgtacattagcatcaattaaa
aagcgtatatttgacgcaggcgtcacaagtgaaagaacaattcaagaggcacaaatcgaa
agggattcactgaagcaacaactgaaagaagtttctaaggaaattgaatcaatgcaaaca
tctttaaatctgcataacgaggaattgcaacaagctcgacacaaaagaaatgaattgtat
gaagaacaacttcgtatccaatcagaaatgcagaagttgcagcaattgcgcgataagcag
aacgatttgtatgcacgtgagatttctttgggtgaatctgtacaaaatctgagagaaaag
ttatctagagctgatgaacaattgacgagtggaatacaagaacttgaaaaaactaagacg
aaacataaagaacaacgggaagttgaagaaagaaaaattcacgaaggatcaagacggctg
cacgaactgacaaatacgcaaaagcaaatagacgatttcgaacaacgtggtgttcacaaa
aaattattgagcgcggaacaacagatgaagcgatatgaaaactcatgcgaagaattgaaa
attacgaaagctgatttagaaaaaagaatcgatcagatcaagaaggatgttatgcgacag
gaagtgcgcaagcgtgaattagtcgacaacatcacattacggcaaaaggaagaggagctc
aaaagtcttgagcaggaaatattaaaaatagaagtttctatgaaaaaaatgcagcacgaa
cttttaatacaggaatataaaaagcttaacgagaaggaggagaagttgttgcgtgagaaa
aatattgctagcggaaaacaagaagaattagaaagatctgtagcgcagatgcagcaggaa
ttgaaaaatgaagtgtatagaatggcgcgaacaaattacaagaaaaaatgcattgaatta
gaggtacaacaagagatcgtagttaatcttaaggaatacgtcaaagctcttgatcgtgcc
atgattgagtatcacgaggaacgtatatcaacagtgaacaaaataattaaacatatgtgg
cgtactgtttacaaaggaacagatacaacaggaattgaaataaaagcggaagctacggaa
gcaggtgataagcgacggcagttcaaatataaattagtccaaagaaaacatggcgctgaa
atggatatgaagggtcgttgcagtgctggtcaaagagtattggcgtctattattataaga
atggcactggcagaaaccttctgcaaaaattgtggagtacttgcgttggatgaaccaaca
acaaatctcgatgaacagaatgctgagagtttggcggatgcaattactaccatagtgaag
gcgcggtctaaatatcaaaagaattttcagttgattgtgattagtcacgatgaaaatttt
gtaaagaaattaacaaagttaaatagaagtggcatattctataggctctaccgagatagt
agggggttgtcatctattaagcgtagtagagatgatcactttacgatgccactcagagat
atcgatgaggattcttctgactattctgatcaggaagagaaagtagatggtgctctaaat
agtcaaactacagcacctgttaaagctccatctagaaaaaggaaatatcaatttaacgtt
gataaaaatgttccgcctaggaagcccaaaaaaatacacactttcgagatctaa
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