Cephus cinctus (wheat stem sawfly): 107273690
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Entry
107273690 CDS
T07523
Name
(RefSeq) putative ATP-dependent RNA helicase DHX30 isoform X1
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccin03041
]
107273690
03029 Mitochondrial biogenesis [BR:
ccin03029
]
107273690
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107273690
Spliceosome [BR:
ccin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107273690
Mitochondrial biogenesis [BR:
ccin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
107273690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_19
Rad17
ATPase
AAA_22
NACHT
Motif
Other DBs
NCBI-GeneID:
107273690
NCBI-ProteinID:
XP_015607633
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MFSCISTVFTKNRLQNSLQSKQYIFSAFSGRADLRSNSRDAGNEVIYQNELTEFLDDFTN
LNKHVLLNVQRFDTSSHSPFKRKFLSLRRNQLKVHDYHDSIGFYYSSKIIPGLQSVRGIH
THAAFPCFASLKNVKKGDGSDKEQFESDYYDNLIDKILKDSPTKNKELHSEKEHRRRVHA
HRFVKTETLHGKEDNLEIEGASLKEIERKYPDCKSKLHNIYNIVSQDTKKSNLISGTSKC
TKRGHDVRWEFTYKILWPSEMTFLAVAKTKIAASKVAALKCLQWLEATGKVKNGIPQTLD
KKEMSSLLDNKVELNIESDIATEIQSLLKEYQNEVEHIVKTFTPIKRESNLLEDSENDGQ
TSLLNTEHFDPVGGSSASKRFKKSSEFRNEILKEKALLRNETADQGLPISAFRTQILEEI
EKSSVLLVKGDTGCGKTTQVPQFLMDYFAAKGRAGDCNMIVTQPRRISAISLAERIAEER
NENIGDVVGYQVRLQQVLPQTPGGILFCTTGVLLRKLQSNPGLIGCSHVILDEAHERSID
TDVLMVLLKRAMKRNPNLKLIVMSATINAELFQRYFDCNAVEVPGRTFPVTMNFLEDIDA
MGIRQSNNRDERNQSQRSPVVDCYYVARLIKWICKNKPDGAILCFLPGWAEITKVQTILT
ESSWANRRKDWILPLHSKVSFQAQRKIFSRPPPGVRKIILSTDIAETGITVSDVVYVIDT
ASHKQVRWDESQGLASMDNQWVSKANINQRKGRAGRVQSGISYHLLTREKFMNLDEFPLP
EVMRISLEKTVLDCKTYSNEKAIDFLAKMPQPPSASAIERAVSDLRKLGALDENETLTAL
GKRISLFTTHPKLSKAMVYSSIFHCTSPIVSVASILSYDSELFVGALNNKSDIRSIKQKY
HPASDHLAMSWLFTQWNSYYNEDPQDIKSFCYNMRLQPERMIILKKLRDLNAQFLVQCGM
LEIGENYDDWNATKNDHAEHDELVRGVLFAGMDHLLQRKKFELIKGRLKNSPNLMVTEDK
RRASLTSETVNYGRKSWPSPYLTYMRRTHSEERRTILIRETSILSPLTVFLFSQGTVNAV
EQTNKSGSNDDDKVLVTIEDKKNVKLICTREDAELLFRFRDMMWSIVRYMVEIQGFQGFD
RVEEYNTVNAYKRQMLFVLGKMLSSADITVDLKSDESDVASVDELLDSESGSETDESR
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtgtatttctacagttttcactaaaaatcgcttgcaaaatagtttgcaatcg
aagcagtacatcttttctgctttctctggacgcgctgatttaagatccaacagtcgagat
gctggcaatgaagtcatctatcaaaatgaattaacggaattcttggatgattttaccaac
ttgaataagcatgtactgctgaatgtacagcgcttcgatacttcatcacattcacctttc
aaaaggaaatttttgtctttgcgaagaaaccaattaaaagtacatgattatcatgatagc
attgggttttattattcttcgaagattattcctggcttacagtcagtcagaggaattcat
acacatgcagcttttccttgttttgcatctctaaagaatgttaaaaagggagatgggtct
gacaaggaacaatttgaatcagattattatgacaatcttatagacaaaatacttaaagat
tctcctaccaaaaataaagaattacattcggagaaagaacatagaaggagggttcatgct
cataggtttgtgaagacagaaacattgcatggtaaagaagataatttagaaattgaaggt
gcttcattaaaagaaatagagagaaaatacccggattgtaaatctaaattgcacaatata
tataacatagtcagtcaagatacgaaaaaatctaacttaatatctggtactagtaaatgt
acaaaacgcggccacgacgtaagatgggagtttacgtacaaaattttatggccaagcgaa
atgacttttttggcagtagcaaagaccaaaatagctgcttcgaaagtggctgcactcaaa
tgtctacaatggttagaggccactggcaaagtgaaaaatggaataccacagactttagat
aaaaaagaaatgtcctctcttttagacaataaagtggagcttaatattgaatcagacatt
gctactgagatacaatcattgcttaaggaatatcagaacgaagttgaacatattgtgaaa
acatttactcccataaagcgagaaagtaacttgttagaagattcagaaaatgatggtcaa
acttcactcctgaatacagaacattttgatcctgtgggaggatccagtgcaagtaaacga
tttaagaaatcctcggaattccgaaacgaaatattgaaggagaaagcgttattgaggaat
gaaactgctgatcagggattgccaatatcagcattcaggacacagatactggaagaaata
gaaaaaagttctgttttactagtaaagggtgatactggctgtggcaagaccacccaggta
ccacagttccttatggattacttcgcagcaaaaggacgcgccggagactgtaatatgata
gtcacacaacctcggagaatttctgctatctcattggcagaacgcattgccgaggaacga
aacgagaacataggagacgtcgtggggtaccaagtgagactccagcaggtgctaccccag
acacctggaggaatattattttgcacaacaggagtcttgctacgtaaactccaaagtaat
cctggccttatcggttgctctcatgtcatcctggatgaggctcacgaaaggtccattgat
acggatgtcctcatggttcttttgaaacgagcaatgaagcgcaatcctaatttaaaactt
attgtaatgtcggctacgataaatgcggagctcttccagcgttacttcgactgtaacgct
gtagaagtacctggtagaacgtttccagtgactatgaacttcctggaggatatcgacgcg
atgggtatcagacagtctaataatagagatgaacggaatcaatctcaacgcagtccagta
gtagactgttactacgtggcgcgtttaataaagtggatatgcaagaataaaccggatggt
gctatattgtgcttccttccgggatgggcagagatcactaaagtgcagactattctcact
gaaagttcctgggcgaacagaagaaaagattggattttacctttacactctaaagtttca
ttccaggcacagcgtaagatattttcaagacctccaccaggagtcagaaagattattctg
tctactgacattgctgaaactggtattactgtcagcgatgtagtttatgtcattgacact
gccagtcataagcaagtaagatgggatgaaagccaaggattggcttcgatggacaatcaa
tgggtatcgaaggccaatattaatcaaagaaaaggcagagctggtcgcgtccaatctggt
ataagttaccatttattaaccagagagaaatttatgaatctagacgagtttccgcttccg
gaagttatgcgaatctccttggaaaaaacagttctggattgcaaaacatatagcaatgaa
aaagctattgatttccttgccaaaatgccacaaccacccagtgctagtgccattgaaagg
gcagtatctgatttaagaaagctaggggctctcgatgagaacgagaccctcacggctttg
ggcaaacggatatcgctatttacgacacatccaaaacttagcaaggctatggtctattcc
tctattttccactgtaccagtcctattgtttctgtggcttcgattctgtcttatgacagc
gagttattcgtcggtgccctaaataacaaatctgacatcagatcaattaaacaaaagtat
catcctgctagcgatcatctggcaatgtcctggctcttcacacagtggaactcttattac
aatgaagatcctcaagatattaaatccttttgttacaacatgagacttcaacctgaaaga
atgatcattctgaaaaagttgagagatctcaacgcacagtttttggttcagtgtggtatg
ctagaaattggggaaaattacgacgactggaatgccactaagaacgaccacgcggaacac
gatgagctagtgcgcggtgttttgttcgctggcatggatcaccttttgcaacgcaaaaag
ttcgaacttataaaaggaagacttaagaattctccaaacttgatggtaacagaagataag
cgtagagcttcccttacgtcagagactgtaaactacggcagaaaatcctggcccagtcct
tatttaacttatatgcgtcgaactcatagcgaagagcgacgaactattttgattcgtgaa
accagcattttatcaccattgactgtatttctcttcagtcagggtaccgtgaatgctgtt
gagcagacaaataagtctggtagcaatgacgacgataaagtattggtaactatagaagac
aagaagaatgttaaactgatttgcactagagaagacgctgaattgcttttccgcttccgt
gatatgatgtggtccatagtacgttacatggttgagattcaaggattccaaggatttgat
agagtcgaagaatacaatactgtaaatgcatataaacgtcaaatgctcttcgttctcgga
aaaatgttatcaagtgctgatatcacggtcgacttaaaatctgatgaatcggatgttgct
tctgtcgatgagcttcttgattctgaatcaggatccgagactgacgaaagtcgttga
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integrated database retrieval system
