Corynebacterium crudilactis: ccrud_08545
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Entry
ccrud_08545 CDS
T04829
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ccjz
Corynebacterium crudilactis
Pathway
ccjz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ccrud_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccjz03019
]
ccrud_08545
Messenger RNA biogenesis [BR:
ccjz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ccrud_08545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ANE04245
UniProt:
A0A172QU58
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Position
complement(1817720..1819897)
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AA seq
725 aa
AA seq
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MNDSRNRGRKVTRKAGPPEAGQENHVDTPVFQAPHASNQSTVKAESAGTDNRDSSQAAPA
KESGDSQSDNGNGGGNSGNGGNNNRNRSSNNRRGGRGRRGAGNSNEGSNNNSGSNNNGGN
QNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYALGGISEIGRNMTVF
EYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVITHGHEDHIGAIPWLL
KLRSDLPILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCL
GLAIKTPAGLVIHTGDIKLDQTPPDGRPTDLPALSRFGDEGVDLMLIDSTNATTPGVSGS
EAEVVPTLKRIVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAFNGRSMIRNMEIAE
KLGYLKAPRGTIISMDDASRLAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLI
ILSSSLVPGNEEAVFGVINMLAQIGATVITGRDAKVHTSGHGYSGELLFLYNAARPKNVM
PVHGEWRHLRANKELAISTGVNRENVVLAQNGVVVDLVNGRAQVVGQIPVGNLYVDGVTM
GDIDADILADRTSLGEGGLISITSVIDNRTGRLLERPTVQTSGFSEDAKSMMREVTELAE
TTMNDLAAEGENDPYRMVQHLRRKLTRFVEQKWKRKPVIMPTVIPMTAETTHIGDDEVRA
SRESL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcccgaaatcgcggccggaaggttacccgcaaggcgggcccaccagaggct
ggtcaggaaaaccatgtggatacccctgtttttcaggcaccacatgcttccaaccagagc
actgtaaaagctgagagtgccggaaccgacaatcgggattcttcccaggctgctccggct
aaagagtctggagactcccagtccgataacggaaacggtggcggaaatagcggtaacggt
ggcaacaacaaccgcaaccgttcttccaacaaccgccgtggtggacgtggacgtcgtgga
gctggaaactccaacgagggctccaataacaacagtggatctaacaacaatggcggaaac
caaaaccgtcaaggtggcaaccgcggtaatcgtggtggcggacgtcgcaatgttgtgaag
tccatgcagggcgctgacctgactcagcgtctgccagagccaccaaaggctccggcaaac
ggtctgcgtatttacgcactcggtggtatctctgaaatcggccgtaacatgaccgtattc
gaatacaacaaccgtctgctcatcgttgactgtggcgtactgttcccatcctctggagaa
ccaggcgttgacctgattcttccagacttcggtccaattgaggatcacctgcaccgtgtt
gatgctttggtgatcacccacggacacgaagaccacattggtgctatcccatggctgctg
aagctccgtagcgatctcccaattttggcttctcgcttcaccttggctttgattgctgca
aagtgtaaagaacaccgccagcgtccaaagctcattgaggttaacgagcagtccaatgag
gatcgcggaccattcaacattcgtttctgggcggttaaccactccatcccagattgcttg
ggccttgctatcaagaccccagctggtttggttatccacacaggtgacatcaagttggat
cagactcctcctgatggacgtccaactgacctgcctgcactttctcgctttggcgatgaa
ggcgtcgacctgatgctgattgattccacaaacgccaccaccccaggtgtttctggatct
gaagcagaggttgttccaaccctgaaacgcatcgttggagatgcaaagcagcgcgttatt
ctcgcttctttcgcatccaacgtttaccgtgtgcaggctgctgttgacgcagctgttgca
tccaaccgtaaggttgccttcaacggtcgttccatgattcgtaacatggaaattgcggaa
aagcttggctacctgaaggcacctcgcggaaccatcatctctatggatgatgcatcccgt
ttggcgccgcacaaggtcatgctgattaccactggtacccagggcgagccaatggctgcg
ctgtctcgtatggcacgccgtgagcaccgtcagatcactgtccgtgatggcgatctgatc
atcctttcttcctccctggttccaggtaacgaagaagctgtgtttggtgtgatcaacatg
ttggctcagattggtgcgactgtgatcaccggtcgcgatgccaaggtgcacacctccggt
cacggttattccggagagttgttgttcttgtacaacgctgctcgtccaaagaacgttatg
ccagttcacggtgaatggcgtcacttgcgtgccaacaaggaattggctatctctactggt
gtcaaccgcgagaacgttgtgcttgcacaaaacggtgttgttgttgatttggttaatggt
cgcgcacaggttgttggccagattccagtcggtaacctctacgttgacggtgtcactatg
ggcgatatcgatgcagatatcttggcagaccgtacctcactcggtgagggcggattgatc
tcgattacttctgttatcgataaccgcaccggccgtctcttggagcgtccaaccgttcag
accagtggcttctctgaagatgcgaagtccatgatgcgcgaggtcaccgagctggctgag
accactatgaatgacttagcagcagaaggcgaaaatgatccataccgcatggttcagcac
cttcgccgcaagctgactcgtttcgttgagcagaagtggaagcgtaagccggtcatcatg
ccgactgtcattccaatgactgcagagaccacacacatcggcgacgatgaggtacgcgct
tcacgcgagtctctctaa
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