Acetivibrio clariflavus: Clocl_3212
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Entry
Clocl_3212 CDS
T01661
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ccl
Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccl03032
]
Clocl_3212
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_3212
Enzymes [BR:
ccl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Clocl_3212
DNA replication proteins [BR:
ccl03032
]
Prokaryotic type
DNA Topoisomerases
Clocl_3212
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clocl_3212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF5760
Motif
Other DBs
NCBI-ProteinID:
AEV69728
UniProt:
G8LW81
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Position
complement(3757696..3759675)
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AA seq
659 aa
AA seq
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MSKQGKNKYYGNDSITSLKGADRVRLRPSVIFGSDGIEGCQHSVFEILSNSIDEAREGFG
NVIEVSRFKDNSVMVKDYGRGIPLDYNEKEGRYNWELVFCELYAGGKYKNNSGENYEFSL
GLNGLGSCATQYSSEYMDVTVFRDGYKYELHFEKGENIGGLIKQKEDYESTGTIIKWKPD
LEVFTDINIPLEYYTNTLKKQAVVNAGLKFILYDEESGQTFEYCYENGIVDYVKEVSQDK
AFTGIQFYETSTKGRDREDKPEYKVKMQIAFCFCNEINLIEYYHNSSFLEYGGAPDKAVK
NAFVYEIDKCIRARGKYNKDEAKITFQDIQDSLILVSNSFSTITSYENQTKKSITNKFIQ
EAMTEFLKQQLEVYFIENKIESDRIIEQILVNKRSRETAERTRINIKKKLSGNIDMSNRV
KKFVDCRTKDVNRREIYIVEGDSALGSCKLARDAEFQAIIPVRGKILNCLKADYESIFKS
EIIVDLLKVLGCGVEIKTKHNKEFNTFDINNLRWSKIIICTDADVDGFQIRTLILAMLYR
LVPTLIYEGKVFIAESPLFEITTKDKTYFAYSDREKNEIIAKIKGKYTIQRSKGLGENDP
EMMWQTTMNPETRKLIKVMPDDIENTEKMFDILLGDNLPGRKSFIEENGYRYLDMVDVY
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaggtaagaataagtattacggtaatgacagtattacctctttgaagggg
gctgacagggtaaggttaagaccttcggttatatttggctcggatggtattgagggatgc
cagcattccgtttttgagatactttcaaattctatagatgaagcaagggaaggttttgga
aatgtaattgaagttagcaggtttaaggataactctgtaatggtaaaggattatgggaga
gggattcctctcgattataatgaaaaagaaggacgatataactgggagctggttttttgt
gagctttatgccggagggaaatataaaaacaattccggtgaaaactatgagttcagcctt
ggattaaacgggctcggaagctgtgccacccagtatagttcggagtatatggatgttact
gtcttcagagacggatataaatatgaactgcattttgaaaaaggtgaaaatatcggtgga
ctgataaagcaaaaagaagattatgagagtacaggaaccattataaaatggaagcctgat
cttgaggtgtttaccgatataaacataccccttgagtattataccaatactttgaaaaag
caggcagttgtcaatgccggtcttaagtttatactttatgatgaggaatcggggcaaact
tttgaatactgttatgagaatggtatagtggactatgtaaaagaagtttcacaggataaa
gcttttacaggcatacagttttatgagacaagtacaaagggaagggacagggaagataag
cctgaatacaaagtaaaaatgcaaatagcattttgcttttgcaatgagattaatttgata
gagtattaccacaattcgagttttcttgaatatggaggagcaccggataaagcggtgaaa
aatgcttttgtatacgaaatagacaagtgtataagagcacgaggaaaatacaacaaggat
gaagctaagattaccttccaggatattcaggatagtttaatacttgtcagcaattcgttt
tcaacaattaccagttacgaaaaccagaccaaaaagtcaataaccaacaagtttatccag
gaagctatgactgaatttttgaagcagcaactggaagtatattttattgaaaacaagata
gaaagtgacaggataattgaacagattctggtgaataaaaggagccgtgaaactgctgag
aggacaaggatcaatataaaaaagaagctcagcggaaatattgatatgtccaacagagtg
aagaaatttgtagactgcaggacaaaggacgtaaaccgtcgagagatttatatagtggag
ggagattcggccttaggttcgtgtaaattggccagagatgctgaattccaggctataata
ccggtaagaggaaagattttaaactgtttgaaagcagactatgaaagtattttcaagagt
gaaataattgtagaccttctaaaagttttaggatgcggcgtggagataaagacaaagcat
aacaaggaattcaatacctttgatataaacaacctgcgttggagtaagataattatctgt
accgacgctgatgtggacggctttcagataaggaccctgatacttgccatgttgtatcga
ctggtgcctactctcatttatgagggtaaggtttttattgccgagtcgccgctttttgaa
ataactacaaaggataaaacctattttgcctattccgatagggaaaagaatgaaataata
gcaaaaataaaaggcaaatacaccatacaaaggtcaaagggacttggggaaaacgacccc
gaaatgatgtggcagaccactatgaatcccgaaacaaggaagcttattaaagtaatgccc
gatgatattgaaaatacagagaagatgtttgatatactgcttggggacaatctgcccggc
agaaaaagttttattgaagaaaacggttacaggtatttagacatggtagatgtatattaa
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