Coregonus clupeaformis (lake whitefish): 121534169
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Entry
121534169 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP130
KO
K19192
histone deacetylase complex subunit SAP130
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121534169
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121534169
BRITE hierarchy
Motif
Pfam:
SAP130_C
FHBP_N
Motif
Other DBs
NCBI-GeneID:
121534169
NCBI-ProteinID:
XP_045061524
LinkDB
All DBs
Position
20:56100431..56156738
Genome browser
AA seq
1373 aa
AA seq
DB search
MSSQPFSRPGMPAQTNPGGKPVSANQSSNQPGEDSSGDVDHPTSSRSGRREDRSYTQVQV
QTHNLQSQAGTPGQPVTVSNPPVHLLQSQAGTPGQPVTVSNPPVHLLQAQVGTPGQPVTV
SNPPVHLLQAQVGTPGQPVTVSNPPVHLLQSQAGTPGQPVTMSNPPVHLLQAQAGTPGQP
VTVSNPPVHLLQAQVGTPGQPVTVSNPPVHLLQAQPAALIDGQMKAALKSLMPSRLIAPA
PVSSQGQGGHIPLPLPPKVQPALPGHITVTLESNIAPISSIPVATISGQQGHSGNRHHLM
AANIQIIRAPSVPQHTFTSHLPRGAVAAAVMSSSKGPAVLRPASGVSAGPVLRPASGASA
GPVLRPASGASAGPVLRPASGPSAAVLRPASGPSAGPVLRPASGPSVAVLRPASGASAAV
LRPASGPSAAVLRPASGPSAGPVLRPASGASAGPVLRPASGASAGPVLRPASGPSAAVLR
PASGPSAGPVQTTVHHITHQTIQSRPPVTSTTAVLPTVVDPISATRNQSPVINPTVTRSA
EMLHGHPGLTIHPPPATISIQRPQGARDTATRINLPSHPAIWGQKPQPPHTMTQKSIFGS
GTPVAAATVAPILTTTTGTAPHTQMTSGTVVTMAMTSHSSHATAVTTSTIPVAKVVPQPI
AHTSPRVQSDYQPIAHTSPRVQSDYQPIAHTSPRVQSDYQPIAHTSPRVQSDYQPIAHTS
PRVQSDYQPIAHTSPRVQSDYPAERTNLISISGHRSSPNPVAIEGRSDNRPSGPVHFQYF
LPTYSSSPYPMTHTYAPITSSVSPTRQYPATPQTPSSAQPSQPAVAVATTVHLNPMQLMA
VDRIGLQSAQISTQGIQPQSMGAQGIQPAPMGVQGLRSSGPIGTQGIQQAPIAGQQSEPK
PSGILLAEGGTFVGGPMGSPFGATQPNATTVQTHPQGGVGVGAPPLVPSPRPSILRKKPA
NEGCVVGKNLIPVGPGEANSGRVEGGVRGPGSPKPAGLKPKAEVHMTMVAPPIQIMAAVE
ALPSQGGGEQQAVSSPAQQHLSQAIPSNLLAPPGPPPPSQPSSSALPAAMAVTPPXPASM
ANTVASPTQPAASSTAACSGGGSAHTEVKIKQEAESMEMCQPVPQPSANSGLSTHLHQAG
SLNGAASSGDLVPGASPRKKPRKQQHVISTEETEMVETNSTDEDRATGHRPLGSRAERRE
SPPREYVDEEGVRYIPVRPRPPVTLLRHYRNPWKAAYHHFQRYSDIRIKEEKESLQDMAN
QRGVACRAQGWKMHLCVAQLMQLSNLEHDVYSRLTSLQEGLIPKKRAGVDDELHRINELI
QGNMQRCKLVMDQVTETRDTMMKVLDHKDKVLKLLNKNGAVKKSNKLKRKDRA
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagccattttctagacctggaatgcctgctcagactaatcctggtggaaaa
ccggtctctgccaatcagtcatccaaccagccaggtgaggacagtagtggtgatgtggac
catccgaccagcagcaggagtggaaggagagaagacagatcctacacccaggtccaggtt
cagacccacaacctgcagtcccaggcgggtacacctggccaacctgtcaccgtgtccaac
cctcctgtccacctactgcagtcccaggcgggtacacctggccaacctgtcaccgtgtcc
aaccctcctgtccacctactgcaggcccaggtgggtacacctggccaacctgtcaccgtg
tccaaccctcctgtccacctactgcaggcccaggtgggtacacctggccaacctgtcacc
gtgtccaaccctcctgtccacctactgcagtcccaggcgggtacacctggccaacctgtc
accatgtccaaccctcctgtccacctactgcaggcccaggcgggtacacctggccaacct
gtcaccgtgtccaaccctcctgtccacctactgcaggcccaggtgggtacacctggccaa
cctgtcaccgtgtccaaccctcctgtccacctactgcaggcccagcctgctgccctcatt
gacgggcagatgaaggctgccctgaaatcgctgatgcccagtcgtctcatcgccccagct
ccagtctccagccagggccaggggggccacatccctcttcctctgccccccaaggtgcag
cctgccctgcctggccacatcactgtcaccctggagagcaacattgctcccatctcctcc
atccctgtcgcgaccatcagtggacagcagggccactccggtaaccggcatcacctcatg
gcagctaatatccagataatcagagctccttctgttcctcaacacacattcacctctcac
ctacccagaggggcggtggctgcagcagtgatgtccagttctaaagggcctgctgttctc
agaccagcatcaggggtcagtgcaggccctgttctcagaccagcatcaggggccagtgca
ggccctgttctcagaccagcatcaggggccagtgcaggccctgttctcagaccagcatca
gggcccagtgcagctgttctcagaccagcatcagggcccagtgcaggccctgttctcaga
ccagcatcagggcccagtgtagctgttctcagaccagcatcaggggccagtgcagctgtt
ctcagaccagcatcagggcccagtgcagctgttctcagaccagcatcagggcccagtgca
ggccctgttctcagaccagcatcaggggccagtgcaggccctgttctcagaccagcatca
ggggccagtgcaggccctgttctcagaccagcatcagggcccagtgcagctgttctcaga
ccagcatcagggcccagtgcaggccctgttcagaccacagtacaccacatcacccaccag
actattcagtctcgtccccctgtcaccagcactacagcggtccttcccacagtagtggac
cccatctcagccacccggaaccagtcccctgtcatcaacccaacggtcacccgctctgca
gagatgctgcatgggcatccagggctgaccatccaccctcctccggccaccatcagtatc
cagcgtccccagggggccagggacacggccacacggatcaacctgccctcccaccctgcc
atatgggggcagaaaccccagcccccccacaccatgacacagaaatccatcttcggtagt
gggactccggtggctgcagcaacagtggcgccgattctaaccaccaccacaggcactgcg
ccgcacacccagatgaccagcggtactgtcgtcaccatggcgatgacctcccactcctcc
catgccacagcagtgaccacctctaccatcccagttgctaaagtggtgccccagcccata
gcccacacctccccccgtgtccaatcagactaccagcccatagcccacacctccccccgt
gtccaatcagactaccagcccatagcccacacctccccccgtgtccaatcagactaccag
cccatagcccacacctccccccgtgtccaatcagactaccagcccatagcccacacctcc
ccccgtgtccaatcagactaccagcccatagcccacacctccccccgtgtccaatcagac
tacccggcagagaggaccaacctgatctccatctctggccaccgctcctctcctaaccct
gtcgccatcgagggcaggagtgacaacaggccgtctggaccggtgcacttccagtacttc
ctgcccacctactcctcttctccgtaccccatgacacacacctacgcccccatcaccagc
tctgtgtcccccaccagacagtacccagcgacgccccagacccctagctccgctcagccc
agccagcctgctgtggctgtggccactactgtccacctcaaccccatgcagctgatggcc
gtggacaggattggtctacagtctgcacaaatcagcacccagggaatccagcctcaatca
atgggagcccagggcatccagcctgcaccaatgggagtgcaggggttgcgtagctctggt
ccaatcggcacacaggggattcagcaggcaccaatcgcagggcagcagtctgagcccaaa
ccatctgggatattattggctgaaggcggtacgtttgtgggtggtcctatgggcagcccg
ttcggcgccacacagcctaatgctaccactgtacagacacacccccagggcggagtagga
gtcggagctccccccctggttccctcccctcgacccagcatcctccgcaaaaagccggcc
aatgaggggtgtgttgttggtaagaatctgatcccggtggggcctggtgaggctaacagc
ggcagagtggagggaggagtgagaggaccaggatcaccaaaacctgcaggattgaagcct
aaagcagaggtccacatgaccatggtggctcctccaatccaaatcatggctgcagtggag
gctctaccttcccagggaggaggggagcagcaggcggtctcctccccagcccagcagcat
ctatcccaggctatcccctccaacctgctggccccccctggtccgccacccccgtcccag
cccagctcctctgccctgccggctgccatggccgtgacacccccgngccccgcctccatg
gccaatacagtcgcctcccccacccagcccgcagccagtagcacggcagcatgcagcggc
ggcggctccgcccacacagaggtcaagatcaagcaggaggcagagtctatggagatgtgt
caaccagtgccccagccctcggcgaactcgggcctcagcacccacctccaccaagctggg
tccctcaatggggccgcctcctcaggggacctggtccctggtgcctccccgaggaagaag
ccccgcaagcagcagcacgtcatctccaccgaggagactgagatggtggagaccaacagt
acagatgaggacagggctacaggccacaggcccctgggcagcagggctgagaggagagag
tcccctcccagggagtatgtggatgaggaaggggtgcgttacatccctgtcaggccacgc
ccacctgtcactctgctgcgtcactataggaacccctggaaggcagcctatcaccacttc
cagaggtacagcgacatccggatcaaagaggagaaggagtcgctgcaggacatggcgaac
cagagaggagtagcgtgtcgagcccaaggatggaaaatgcacctgtgtgttgctcagctc
atgcagctgtcgaacctggagcatgatgtatatagcagactgacgtccctccaggagggg
ctaatccctaagaagagggccggggtcgacgacgagctgcaccgcatcaacgaactcata
cagggtaacatgcagcgctgtaaactggtgatggaccaggtaacagagacccgggacact
atgatgaaagttctggatcacaaagacaaggtcctcaagctgctcaacaagaacggagct
gtcaaaaagtctaacaaactgaaacgtaaggatcgggcctag
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