Coregonus clupeaformis (lake whitefish): 121534280
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Entry
121534280 CDS
T08357
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121534280
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
121534280
BRITE hierarchy
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
121534280
NCBI-ProteinID:
XP_041696830
LinkDB
All DBs
Position
20:4587377..4601519
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AA seq
1391 aa
AA seq
DB search
MAAQWRGKDENIVTGNTEFLTTNAFNEAVLGKGKVSALEMDTHSCLDPSILAMFEDSAVT
AETRSRLDEECESTLLTALTEILDSVDDETLSPFDTLPDTGVFSDQRLRDNSPLRRLLSL
TRSPPDKEPLFRSIKTPSSSSSPSSSVGKVEAVITDRPRRARLTPRAQASSTPTSIPRSD
GEEEERSDAEGEEEEEEGSKVHIHSPTQGFNLTNQDSEEFSPDQSEVRPLNSVENDHGYY
STVSLVDLVKLMHPYCLRVSLDKEGEDWVGTPRQEAYSLGERRADQRVPLEGEVWRYTKP
GSEASDEEIDVDGSDDECPSGGGIEKEGDGGQGSRGEEVKRLKSLLVKWDAPKEGQKTKN
KKRVSFGPVLVTSYEQPAADEPDLNVFPDLSELTRQIPSSDFNNNTETTTTISLTTPFPE
SSAASSKDNQHQVVTDLSERTGDKLSSEPLPQQSESKPRPALSLQQYRLLRQQKRLPVMA
KPENYTTKWPSLPETPKELPPIPCLQGPKHTMWGPTTTRPTHHYIGSTTGDDVSGFKPIS
KTRMKIVSPACPSKPGKGIGVNGSKPVGSGTKTSLASSALKPNRNSMESKSADDVGILKS
IWTETISPASPLPSPNLNSNPVAGLGKNRTRPARSAVAVSSDPPNPVLVPLPGTRPALGG
FDRSHGTNQEQQEQEQSPPPSTTQETPAPKPKMVFCNRDPSLKSTGLLLEIQRRFSTKQP
YRKTLHTQTSAETMKQGDQPRSLSTRKEIETVPEGSKFSPSAPVMASLSSSPSVHPPTPA
VAPYPEMERAKWVALGDLPHVQLSTSPESSSCIQTPNCGTGIEATDLTSLLERFEETQAK
EESESEREASPDRSPVRYEELSNNTEGMLRLLGAYLLSTQETLCLPEPAGIPELVNTLEA
LRTPEPLRTPEPLRSPELRDTQEPLGTQNILSTQNVLSTQEQAPAQLRWKPLTPVTPQRK
QPAIPKPSPPKAIQIIDPRPLPPKKAHPLPPKPPVTPSQFQTAVSVSSDHDYCLSQDQPG
SNTTTLCSKRQTILPDHQPITNSSAVPGAQNSGKYMRQQQPVDSRTVPETELPSDSPPLS
TESSPSRTEAITAGETQEERTSPCIPSPPSASPPARGRSAAQRYQTRSSCSDSSSRSPSS
SSSSSSSSSSRSRSRSPPRKRFCPRRSESSSCSSSCSSSVSRSPVPCRYRLHYPRSRSWN
RSQSRSKSWSRSGSRSRSRSPTTLAYRRTQRWRRHCYSPTLSSNNVGDSRKRKRQQYTRN
QKLKAIDERRVVYVGRIQRTMMHAELRERFSLFGEVEECTLHFRDRGDHYGFVTFYNMKD
AFAAIENGYKLRRPDELPFDLCFGGRRQFCKSTYADLDYNQEEVDPTPAKSKEEELDFDT
LLKQAQKGLKR
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagtggcgtggaaaagatgagaatatagtcaccggcaacacggaatttctg
accacaaacgcattcaatgaggctgtcctgggtaaagggaaagtcagtgctctggaaatg
gacactcactcctgcctggacccttccatcctggctatgtttgaagactccgccgtaact
gcagagactaggagcagactggatgaggagtgtgagtccacgttgttgacagcactaaca
gagatactggacagtgttgacgatgagaccctgtctcccttcgacaccctgcctgacacc
ggggtcttctctgaccagaggctacgggacaactcaccgttgaggcggctgctgagttta
acacggtctccacctgataaagaaccactctttcgttccataaagaccccctcttcctct
tcatccccctcttcctctgttggaaaggttgaggcggtcattaccgacagacccaggagg
gctaggctaactcccagagcccaggcctcttccacccccacatccataccgaggagcgat
ggagaggaggaggaaaggagtgatgcagaaggagaggaggaggaggaggagggcagcaag
gtccacattcacagtccgactcagggcttcaatctgaccaatcaggactctgaagaattc
tcccccgaccaatcagaagtgagaccgctgaactctgtagagaacgaccacggctactac
tctacagtgtccctggtcgacctggtgaaactaatgcacccctactgcctgagggtgagc
ctggataaggagggggaggactgggtcggcacacccaggcaggaggcctactctctgggg
gaacggagagcggaccagagggtacccctggagggcgaggtgtggaggtatacgaagccc
ggttcggaagcgagcgacgaggagattgatgtggacggatcggatgacgagtgtccctca
ggaggagggatagagaaagagggggatggaggacagggaagtagaggtgaagaagtgaag
cgacttaaaagtttactggtgaaatgggacgcgcccaaagaaggccagaagaccaagaac
aaaaaaagagtgagcttcggacctgtcctggtgacgtcttacgagcaaccagctgcagac
gaacctgacttaaacgtgttcccggacttgagcgagctcaccagacaaatccctagttct
gacttcaacaacaacaccgaaacaacaacaaccatttccctcacaacaccctttccagag
tcttcagcagcatcttcaaaggacaaccaacatcaggttgtaactgacttatctgaacgg
accggagataagttgtcatcggagcctctaccacagcaaagcgagtccaagcccagacct
gccctcagtcttcagcagtaccgcctgctgcgccagcagaagagactacctgtgatggcg
aaaccagagaattacaccaccaagtggccctcgctacctgaaacccctaaggagttgcct
cctataccctgtttacaaggacctaaacataccatgtggggaccaacgaccacacgtccc
acacatcattacataggaagtacaacaggggatgatgtcagtggattcaagcctatatct
aagactaggatgaagatcgtctctcctgcttgtcccagtaaacctggtaaaggcattggc
gtcaatggatcaaagcctgtaggaagtgggactaagacttctcttgccagctcagctcta
aagcccaaccgcaactcaatggaatctaaatctgctgatgatgttggtatattaaagtct
atttggactgagaccatctctcctgctagtcccttaccaagtcccaacctgaactcgaac
ccagtggcgggtctgggcaagaacaggactaggccagcaaggagtgctgttgcggtcagt
agcgaccccccaaaccctgtcctggtcccactaccaggaacccgtccagctttgggtgga
tttgataggagtcatgggaccaaccaggagcagcaggaacaggaacaatctccgcctccg
tccaccacccaggagactccggcgcccaagcccaaaatggtgttctgcaaccgggatcca
agcctgaagagcaccggcctcctccttgagatccagcggaggttctccaccaaacaacca
tatcggaaaacacttcacacccaaacctctgcagagaccatgaaacaaggggatcagcct
cgctctctcagcacaaggaaagagatcgagactgtaccagaagggtccaagttttcccca
agtgcaccagtaatggcaagtctgtcctccagcccttcagtccatccacccacccctgct
gttgctccttacccagagatggagagggcaaagtgggtagccctcggggacctcccccat
gtccaactgtccacctctccagagagtagctcctgcatacagacccccaactgcggcaca
ggaatcgaagccacagatctgaccagccttctggagcggtttgaggagacacaagccaaa
gaggagtctgagagtgaacgtgaagccagtccagacaggagccctgtcagatatgaagag
ctgagcaacaacactgaagggatgctgagactgctgggtgcctatctcctcagcacccaa
gaaacactctgtcttccagaacccgctggcattccagaacttgtcaacacactagaagca
ctcagaactccggaacccctcagaactccggaacccctcagatctccggaacttcgcgat
actcaggaacctctcggcacccaaaacattctcagcactcaaaacgttctcagcactcag
gaacaggcccctgcacagctgcgctggaaaccccttacccctgtcacacctcagaggaag
caaccggcgatccctaaaccttcccctcccaaggccatccaaatcatcgacccccgtcct
ctaccacccaaaaaggcccacccacttcccccaaagccccctgtcaccccctctcagttc
cagacagcagtgtctgtctcctcggaccacgactactgtctatctcaggatcaaccagga
agtaatactactacgctatgcagcaaaagacaaacgatactccccgaccaccaaccaatc
accaactcctccgcagtgcctggcgcacagaactctgggaaatatatgcgccaacagcag
ccagtcgactccaggactgttccagagacagaacttccctcagactctcctccgctgtct
acagagagctccccctctaggacggaggccattactgcaggggagacgcaggaagagaga
accagcccctgcatcccctcccctccttcagccagtccccctgccagaggtaggagtgcg
gcccagcgctatcagaccaggtcttcatgctcagactctagctctaggtccccttcatcc
tcatcttcctcatcctcctcctcctcctctcgatccaggtctcgctctccaccccgaaag
aggttctgtcccagacgttctgaaagcagctcctgctcgtcctcttgctccagctccgtc
tcccgttccccggttccctgccggtaccggctacactacccacggtcacggtcctggaac
cgctcccagtccagatcaaagtcctggtctcggtctgggtccaggtctagatccaggtcc
cccaccactctggcgtacaggaggacccagaggtggaggaggcactgctacagcccaacc
ttaagctctaacaacgtcggtgactccaggaaacgaaagaggcaacaatatacgaggaat
caaaaattaaaagccatagatgagcgcagggtggtgtacgtgggccgcatccagaggacc
atgatgcacgcggagctgagagaacgcttctctctgtttggagaggtggaggaatgcacc
ctgcactttagagacaggggcgaccactacggctttgtgacgttctacaacatgaaggat
gcgttcgcagccatcgagaacggctacaagctgaggagacctgacgagctgccctttgac
ctctgcttcgggggcaggcggcagttctgcaaatctacgtacgccgacctagattataat
caggaagaggtggatcccactccagcgaaaagtaaggaggaggagctggactttgacacg
ctattgaagcaggcacagaaaggcttgaagcggtag
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