Coregonus clupeaformis (lake whitefish): 121535252
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Entry
121535252 CDS
T08357
Name
(RefSeq) sickle tail protein homolog
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Motif
Pfam:
AIP3
DUF6259
Motif
Other DBs
NCBI-GeneID:
121535252
NCBI-ProteinID:
XP_041698065
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All DBs
Position
21:17181397..17238421
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AA seq
2080 aa
AA seq
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MEYQYIRHTHWRGRRELGNNNQRLSSPEDVERFHRQQTVENQNHHSELRSPSTVPRRYTI
GGQGPRSARDPLTMQHADVERKKEVFLEHLKQRYPHHAAVIMGHQDRLRDHARSPQHSAS
PPPGIGEQLEHLSVASLESLETMSEGDGLAAFTRGCQARASLPVVRSANQTRVRSLGVLY
LQYAEETKQIRMPNEITSKDTIRALFVSAFPQQLTMKMLESPSVAVYIKDETRNMYYELT
DVRNITPRCCLKVYHKDPAHAFNRSNARPSNAEGRIPREILYGSHSPVHTLQSTCSPVHT
IQGSMSPPTVRSMPSSPSRIPYVPRTGGGVPGSATLPRAGMSSGPPSRSVTPCPSAIQER
RDVKPDEDLSSKSIALVRADGLYVNVTDRYAVQEGRLSIASSKGGGHTGNMVDMGGGSLH
WASVKSTTSYTENPEQQHSLYRQKSRRYGESQGLPPLDTKTPPPSPHRLNDNHGPVATER
DSPIRRSLRKESNGNTVEVVNRTRGSVSSMSSSPVFVELPPGLYGDRLFQGHLTPNNPQT
SERMKAMEQQIASLAGLVQHALAIGPAEKDRRTASPFHVNNSTGVSPVPAASLLADSSNA
LVSQAPPPDPTLQVTLTTVRRNVTDLRQQLHQLKQLQMQNQDSVRGMLKRAEEELAEVMS
ETLQRQQQETEPGQRQRTTVDEERHKYQAMEERVLAQLRKLEEYVDHLRRDSSSGKGQPS
VTLRDVEEGAVNLRRVGESLAGLKGEFPSLHGKMRTVLCVEVEAVRFLKEEPQKMDSMLK
RVKALTEALSGLRRCVTENHPHDPKPGAAKAATAEGGVKPAIDQSEPPRKNLPTMESPKP
QPRTSVRPPQPQVKNPAGRPDTASTSPDVVHRVKSSPINMQPCQHLAALPHHHPSPPLTP
THGRDSPTVAKVSPRSRENSPALQKRMVPWCGDGPAPMASSTETTTQPPGSEEIHTNSGS
IKHIVMDIEAAERERDLEEGRSSQNSVATSAGSEFEQILQEAQASLMRAIPDLEVTETGR
REAQSSPPPLAPDHPSLPQPLPDPELPLNTPLQDEVDAPQPTEASLPEPTQPANVAAEVT
VQASPERPHRPMVEKPRRPSVEREMKNSPEKAGKSPPPPPPRRFFPSLSGPGLTTGRSGE
VIFTTRKEAATAQDDEEEVVPQPSPKPTRQPPEVKPKPQTTPVSTASAETEEKEDEEEED
DDDEEEDQFMKELQVFQKCTLRDVSTKCDIDLTSTASQVRQIEPELSLSPKDPKSQENKG
KEKSVLNTDENRFDTVPKSPRVMYYVTGQLSNEKPPSGKTDQSEGREGTVSPSQVADTNT
FDSQQPELLIADRSPLVSCNSVLESQDCPPNTQKIAVGEDSEKESLVDENVRKDPVQSQK
VRVVEPVSPPIPAEKQDISEASQQDCYLTNSITSSSLSTSQPPYSPASLPPPPSSSPPPV
PVIKSVTSTGQEVSGNPGSPPPESRGLDDSQSPQVVLRSSRGRAPRYVEEGSSLSPDLPD
EEGPPPPENISFMMITSNRVQALSAGEYQEIVNGTNVSEVQTVNVGNDTTSISQEHCGFD
RKPVIIIFDEPMDIRSAYKRMSTIFECEEELDRLLHQQSIKEEAEEAASEKSVPQVKPNT
ELHQANKTAVTENTASRHNNSPAVVAQQKSTAECSSPEQSKTEPSNSSKPETKNKFKFKF
PKNKLAAISQAIRTGTKTGRKTLQVVVYEDKEEWDGHMKETERFEINSSSIHQTDSSHLT
TVNNITSPSTLTQSNSKRRTEEICKNAYESITSLEETIKQLEITVDNISPTAPKTDSCEE
SPAAVKPKREREGSPSKRPAPPQVSKSLKHPQSKKSKPQLPRPSVTSSSKKQNTSGSPSS
NRMSLSVSAKSWQQPAGSADKPGGKTQKLQANQKQFPQANRSAKKAGGDSNHYFLALPAS
KIPAFCHSSGKNMSSPGSNSVSNPIKSPSSSPSSSHKSFIPSLNLSRLIPPSPSLNNRRQ
NLSLSSQTQNGRPSPFSYCSSSSSSSTSPSSNSSSLSPTSTSSTSSSPPSPALLSPTAMS
QGARSIHRIAHIPSFTGHKMQGGHSSKTTHIPAVSSSKDI
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcagtacatacggcatactcactggagagggagaagagagttaggaaacaac
aaccagagactctcatcacctgaggatgtagagcgtttccacaggcagcagactgtagag
aaccagaaccaccactccgagctacgttcccccagcacagtccccaggaggtacaccatc
ggagggcaagggcctcgcagcgccagagaccccctgaccatgcagcacgctgacgtagag
aggaagaaagaggtgttcctggagcacctgaagcagaggtatcctcaccatgctgctgtc
atcatgggccatcaggaccgcctcagagaccatgccaggagcccccagcactctgccagc
cccccgcccggtataggggagcagctggagcacctctcggtggcctctctggagtctctg
gagaccatgtcagagggagacggcctagccgccttcacccggggctgccaggcacgggcc
agcctgccggtggtccgctctgccaaccagaccagggtcagatcattaggtgtgctctac
ctgcagtacgcagaggaaaccaagcagatccggatgcccaatgagattaccagcaaagac
acaatcagggctctgtttgttagtgctttcccccagcagctcaccatgaagatgctggag
tctcccagtgtagctgtgtacatcaaggatgaaaccaggaacatgtactatgagctaact
gatgtcagaaatattacacctcgatgctgtctgaaggtgtaccacaaagaccctgcacat
gccttcaatcgcagcaacgcaaggcctagcaatgctgaaggcaggataccaagggagata
ctgtatggaagtcatagccctgtgcacactttacaatccacctgcagtcctgtccacacc
atacaggggtccatgtctccccccacggtccgctccatgccctcctccccctccaggatc
ccctacgtcccccgaactgggggaggggtgccaggcagtgccaccctccccagggccggc
atgtccagtgggccccccagcaggtccgtcaccccctgccccagtgccatccaggagaga
agagacgtcaaacctgacgaggacctaagcagtaaaagtatagcgctggtgcgtgccgac
gggttgtatgtcaacgtcactgaccgttacgctgtccaggagggccggctgagtatcgcc
tcctccaaggggggcggccacacggggaacatggtcgacatgggtggtggtagcctccac
tgggcctcggtcaagtccacaacctcctatacagagaacccggagcagcagcactccctc
tacaggcagaagtcccggaggtacggggaaagccagggactaccgccgcttgacaccaaa
accccgcccccttcccctcacagattgaacgacaaccacggtcctgtggccacggagagg
gactctccaattcgccggtctctgcggaaggagagtaatggtaatacagtggaggtggtg
aacaggaccaggggtagtgtgtcctctatgtcctcctctcctgtgttcgtggagctcccc
ccagggctctatggggacaggctgtttcagggtcacctcacccccaataacccccagacc
agtgagcgaatgaaggccatggaacaacagattgccagtctggctggccttgttcagcat
gcacttgctattgggccagctgagaaagataggaggactgcttctcctttccatgtcaac
aacagtacaggagtgtcaccagttcctgcagccagcctccttgcagacagctccaatgct
ctagtctctcaggcccctccccctgaccccaccctgcaggtcacactgaccacggtcagg
aggaacgtcactgacctccgacagcagcttcaccaactcaaacagctacagatgcagaac
caggacagtgtgagggggatgctgaagagagcagaggaggagctagctgaggtgatgtct
gagaccctacagagacaacagcaggagacagagcctggccagagacagaggaccacggtg
gatgaggagagacacaagtaccaggccatggaggagagagtgctggctcagctcaggaag
ctggaggagtatgtggaccatctgaggagagactcgtcctctggcaaaggtcagccgtca
gtcaccctcagggacgtggaggagggagctgtcaacctcaggagggtgggagagtcctta
gctggacttaaaggtgagttcccaagcctgcatgggaagatgcggacggtgctgtgtgtg
gaggtggaggcggtgcgcttcctgaaggaggagcctcaaaagatggacagcatgcttaag
agggtcaaagccctgacagaggctctcagcggtctcagaagatgtgtcacagagaatcat
cctcatgatcccaagcctggagcagccaaagcagccacagcagaggggggtgtaaagcct
gccattgaccagtctgaacccccccggaagaatctccccacaatggaatcccccaaacct
cagcccaggacctctgtcagacccccccagccccaggtcaagaaccctgcaggcaggcca
gacacggcctccacctcacctgacgtcgtccaccgtgtgaagagctctcccatcaacatg
cagccgtgtcagcacttagcagctctgccacaccaccaccccagccccccactgactccc
acccacggccgagactcccccaccgtggccaaggtcagtccccgcagccgggagaacagc
ccagccctgcagaagagaatggtcccctggtgcggcgatggaccggcacccatggccagc
agcactgagaccaccacacaaccacctggctcagaggagatccacaccaacagtggcagc
atcaaacacatagtcatggacattgaggctgcagagagagagagggacctggaggagggg
aggtcatcacagaactcagtagccacctctgctgggagtgagtttgaacagattctccag
gaggcccaggccagcctgatgagggccatacccgacctggaggtgactgagacagggagg
agggaggctcagtcctcccctccacccctagctccagaccatccatctctcccccagcct
ctcccagacccagagctgcccctcaacactccactgcaagacgaagtagatgcccctcaa
cctactgaggcatctcttccagaacccactcagccagctaatgtggctgctgaggtgact
gttcaggccagccctgagcgaccacataggcctatggttgagaagcctcgcaggcccagt
gtggagagggagatgaagaatagcccagagaaggcagggaagtctcctccaccaccccca
ccacggaggttcttcccttcactgtcaggcccagggctgaccacagggaggtctggagaa
gtcatctttactaccaggaaggaagccgccaccgcacaggatgatgaagaggaggtggtc
cctcaacccagtcccaaacccaccagacagcccccagaggtcaagcccaagccccaaacc
actcctgtttccacagcctcagctgagacagaggaaaaggaggacgaagaagaagaggat
gatgatgatgaggaggaggatcaattcatgaaggaactacaggtgtttcagaagtgcact
cttagagatgtaagcacgaagtgtgacatagaccttacaagcactgcatcccaagtcaga
cagatagagccagagctctccctctcacccaaagacccaaagagtcaggagaacaagggt
aaagagaaaagtgtgctcaacactgatgaaaacagatttgacactgttccaaagagtccc
agggtcatgtattatgtcacaggacagttatccaatgagaagcctccatcgggaaaaaca
gaccaatcggaaggcagggagggaacagtgtccccctcacaggtggcagacacaaataca
tttgactcccagcagccagagttactaatagcagacaggtcacctctagtatcatgtaac
tcagtgctggaaagccaagattgtcctcctaatacacagaagatagcagttggagaagat
agtgagaaggagagcctcgtagatgagaatgtccggaaggatcctgttcagagtcagaaa
gtgagggtagttgaacctgtgtctcctccaatacctgcagagaagcaggacatatctgaa
gcctctcaacaagactgttatcttactaacagtataacatcatcatctttgtcaacatca
caaccaccatattcaccagcatcactaccaccaccaccatcatcttcaccaccaccagta
ccagtaatcaagtctgtgactagtacaggccaggaggtttcaggtaatccagggtctcct
ccaccagagagcaggggcctggatgacagccagagcccgcaggtagtgttgaggtcctcc
agaggaagagcaccacggtatgtagaggagggcagcagcctgagccctgacctcccagat
gaggagggccctcctccccctgagaacatctccttcatgatgatcaccagcaacagagtg
caggctctgtccgctggggagtaccaggagatagtgaatggtaccaacgtgtccgaggtt
cagaccgtcaatgtggggaacgacaccaccagtatcagccaggagcactgtggcttcgac
aggaagcctgtgatcatcatattcgacgagcccatggacatccggtcggcctacaagcgt
atgtccaccatctttgagtgtgaagaggagctggataggctgctgcaccagcagagcatc
aaggaggaagcagaggaggcagcgtcagagaagagtgtacctcaggtaaagcctaacact
gaactacatcaggcaaacaagacagcagtgacagaaaacactgcaagccgtcacaataat
agtcctgctgtggttgcgcaacagaagagtacagcagagtgctcatcgccagaacagtct
aaaacagagccctcaaacagcagcaaaccagagaccaaaaataagttcaaattcaagttc
cccaaaaataagttggcggctatcagccaagcgattcgcactgggaccaaaacaggcagg
aagacgctccaggtggtggtctatgaggacaaggaggagtgggacggacacatgaaggag
accgaaaggtttgagatcaacagcagtagcatacaccaaactgactccagtcacctcacc
actgtgaataacatcacatcaccaagcactctcacccagtcaaactctaaacgcaggaca
gaggagatctgtaagaatgcctacgagtccataaccagtctagaggagaccattaaacag
ctggagatcactgtggacaatataagccccacagcgcctaagacagactcctgtgaagag
tctccagccgctgtgaaacccaaacgagagagggagggcagtccctccaagaggcctgcc
cctcctcaggtctcgaagtccctgaagcatcctcagagtaagaagtccaaaccacagctt
cccaggccgtccgtcacaagcagctccaagaaacagaatacaagtggctctccttcttcg
aatcggatgtctctttctgtgtctgcaaagtcctggcagcaaccagctgggtcagctgac
aaaccaggaggaaaaactcagaagctccaggccaatcagaagcagtttccacaggctaac
agaagtgctaagaaagctggtggggatagtaaccattatttccttgctttacctgcttct
aagatcccagccttttgtcatagctctggaaaaaatatgtcatcgcccggttcaaactct
gtgtctaaccctattaaatcaccttcctcctccccgtcctcctcacacaagtctttcatc
ccgtctcttaatctgagtcgtctcatccctcctagtccttctctcaataacagacgtcaa
aatctttccctctcatcacaaacccaaaatggccgacccagccctttctcttactgctca
tcttcctcttcctcctccacctccccctcttccaactcctcctctttgtcccccacatcc
acgtcttccacctcctcctcccctccctctcccgccctcctctccccaactgccatgagt
caaggtgcgaggagtatccaccgcattgcacatatacccagcttcaccggtcacaagatg
caaggtggacacagcagcaaaaccacacacataccagcagtttcttcgtccaaggacata
tga
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