Coregonus clupeaformis (lake whitefish): 121544254
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Entry
121544254 CDS
T08357
Name
(RefSeq) putative Polycomb group protein ASXL2
KO
K11471
additional sex combs-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121544254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544254
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121544254
BRITE hierarchy
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
121544254
NCBI-ProteinID:
XP_045064978
LinkDB
All DBs
Position
29:8234613..8252933
Genome browser
AA seq
1578 aa
AA seq
DB search
MRERQKKKKGRTWAEAAKTVLEKYPNTPMSHKEILQVIQRERLKEIRSGTSPLACLNAML
HTNSRGEEGIFYKVPGRMGVYTLKKDIGDVVKELSEEGSEVKELSEEGSEELSEEGSEVK
ELSEEGSEEDGSDNLSDSQRSTENNNYNTNNQEGRRGRWRRRGPSKLPPDPSSPQPRCSS
PSVPSSKLISPSQKHSKKALKQALKQQQQRNQRRHVGMPTTSSPRLLLKTVKDMADTIAT
KTDSCPAAGTRKMSQRSSRLSARQLKRTKCAEIDVETPDSILVNTNLRALINKHTFSVLP
TECQQSLLTLLPEVDQQVCMDGLLKVTSSALNNEFFTSAAQSWKERLAEGEFTPELQLRM
RQEIEKEKKVEHWKESFFESYYGENSGLSLEESKELLESGLSLELSATKAQSSPPTQPRP
AGPPLLDPKIPANSCQTRSSERRLRSSSLPINPTCKPIEPPYKPIEPPKPRPEPEPVQEE
PVPVPPVVLPVVLPVLPAKIVQKTLEVEYPRHRTRSRGLSLPIVAVEAAVVRRQDVVNST
STVPLGEKQKEEEEEQDLKEAQPETPQFPKIPPSPEIPPSPEISLSPEIPPSPEIPPSPE
IPPSPEVPPSPEIPPSPEIHPSPEIPPSPEIPPSPEIHPSPEIPPSPEIPPSPEIPPSPE
IPPSPEIPPSLEIPPSPEIRQSPEIPPSPETPEIRQSPEIPPSPEIPPSPEIPPSPETPE
IRQSPEIPPSPAQESHPEVCPQMKLSSSLPIDLPKPEPLGVDKHSAKRREDVDVTPERGA
SAPVSVTPVSTPVSTPVSTPVSTTPSPEPLKRKSSSSEQEVELTPEKRARITPPAVSVVT
SPAATVATAQRVPPLKITVSRILSVPVLASPTQVSPKTPLPVSLSPSPSPGPSPGRIGAR
TLADIKAKAQLARTQHAAAAAASSSSKGAVPGPGPGGGSGEQINHRASAQTLHSRPSFST
QSSTQSQSTTRLPASSNIGQFTCQSPDAVTTPAHSRSVQSGSSVPFDLSLSQRSSNTSRA
SLTDDRQRGYSAGNMNLVSLMGPQHGNIQHTSYPSGPQSTSSYTSSVCGVKSQYVSGGSM
AARASHFIPANNPLVTSLLQGKEIPLEQILPKPLAKAEVQVAQAKPSHDDKWKIKSHSTA
GTASGESQSQYLHVGSVDDYSRSKQQGSIGQSPLFKLAELQHHQRETPNKDTQEQILQAL
MQRTTQQHQNQPYGVSGAGGAQRTQFGACNLGHQEECGDRPRFSAGFPGRKRMSRPAMSG
HYLLNVSTYGRGSESSKSSHPLATANTSLTPQANLKREHTEGEELADEWEESVENKPHSH
SNSAGGVKMEQQGFSITKMGEALGFQHCSRIKSESPSVEGCLPEQEDNSSASTERDSGTS
ARAKETNLFTQSQHRWHLELCNSKLGGHCEPYRVSISPHVGTMDPSHPSTHQHSSAFQTE
RPPIDNQESMVGSCYGGTISMSVPHALSLNHSAAVSSTASSASPSVSGSGGDSGSGTSSV
MSFSVTVTTIPAGHPLDHRSQGEGSPEQGFMAGSGIEDVQSKCYCRLKAMIMCKGCGAFC
HDDCIGPSKLCVSCLVVR
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagacagaagaagaagaaggggaggacatgggcagaagctgctaaaacggta
ttggaaaagtacccgaacacacccatgagccacaaagagatcctacaggtgatccagagg
gagagactgaaagagatcagaagtggtacttccccactggcctgtcttaatgctatgctc
cacaccaactctcgcggtgaagaagggatcttttacaaagtacctggacgaatgggggtc
tatacactgaagaaggacattggggatgtggtgaaggaactgtctgaggaggggtcagag
gtgaaggagctgtctgaggaggggtcagaggagctgtctgaggaggggtcggaggtgaag
gagctgtctgaggaggggtcagaggaggacggtagtgataatctgtctgattcccagaga
agcacagagaacaacaactacaacactaacaaccaggagggcaggaggggacggtggagg
aggagagggccctccaagctgccgcctgatccttcgtctcctcagccacgctgttcatct
ccctctgtccccagcagcaagctcatctctccctcacagaaacacagcaagaaggccctc
aaacaggccctgaagcagcagcagcagaggaaccagcggagacatgtgggcatgcccaca
acctccagccctagactactccttaagactgtcaaggacatggctgacaccatcgccact
aagaccgactcctgtcctgctgctggtaccaggaagatgtcccagaggtcaagtcgactc
agtgcacggcaactgaagcgtaccaaatgtgcagagatagacgttgagacaccagactct
atcctggttaacaccaacctacgtgccctgatcaacaaacacaccttctctgtcctgccc
acagagtgccaacaaagtctactcacactactgcctgaggtcgaccaacaggtctgtatg
gatggtctgttgaaggtcaccagttctgccttgaacaatgagtttttcacatcagcagct
cagtcctggaaggaacgactggcagaaggtgagttcactcctgagttgcagctgagaatg
cgtcaggagattgaaaaggagaagaaggtggagcattggaaggagagcttctttgagagc
tactatggtgaaaactctggactcagcttagaggaatccaaagagctgcttgaatctggt
ctcagtctggagctctcagccaccaaagcccagtcgtctcctccaacacagccacgtcct
gctggtccaccactgctagatcccaagatccctgctaacagctgccagactcgctcttca
gagaggaggctccgatcatcatcactgcccataaacccgacatgtaaaccaatagaacct
ccatataaacctatagagcctcccaagccaaggccagagccagagcctgttcaagaagaa
ccagtaccagtcccacccgttgtactaccagttgtactaccggtgctgccagcgaagatc
gttcagaagacactggaggttgagtaccccagacacaggactcgtagcagaggtttatcc
ctacctatagtggcagtggaggcagctgttgtgcggagacaggatgtggtgaactcaacc
tcaacggttccacttggagagaagcagaaggaggaagaggaggagcaggatttgaaagaa
gcccagccggagaccccccagttccctaagatccccccatcccctgagatccccccatcc
cctgagatcagcctgtcccctgagatccccccatcccctgagatccccccgtcccctgag
atccccccgtcccctgaggtccccccgtcccctgagatcccaccatcccctgagatccac
ccgtctcctgagatccccccgtcccctgagatcccaccatcccctgagatccacccgtcc
cctgagatccccccgtcccctgagatccccccgtcccctgagatccccccgtcccctgag
atccccccatcccctgagatccccccatcccttgagatccccccgtcccctgagatccgc
cagtcccctgagatcccaccatcccctgagacccctgagatccgccagtcccctgagatc
ccaccatcccctgagatccccccgtcccctgagatcccaccatcccctgagacccctgag
atccgccagtcccctgagatcccaccatcccctgcccaggagagtcatccagaggtctgc
ccccagatgaagctcagttcatcactgcccatcgaccttccaaagccagagcctctgggc
gtggacaagcatagtgcgaagaggagggaagatgttgacgttacaccagagagaggagcc
tcagcccccgtgtcagtcacccctgtatccacccctgtatccacccctgtatccacccct
gtatccaccaccccatccccggagccgttgaaaaggaagtcctcatccagtgaacaggaa
gtagagctgactccagagaagagggcccgcatcactccaccagcagtatccgtggtaacc
tctccagcagccacagtagcaacagcacagagagtgcctccgcttaagattactgtgtcg
cgaatcctatcagtcccagtccttgcatctccaacccaggtatcccccaagacccctctc
cctgtctccctcagtcccagtcccagccctggtcctagccccggacgcattggtgctcgc
actctggctgacatcaaggctaaagcccagctagcccggacccaacatgcagcagcagct
gcagccagctcctcctctaaaggtgcagtaccaggcccaggaccaggaggaggcagtgga
gagcaaataaaccatagagcttcagcccagaccctccactccagaccctccttctccacc
caaagctccacccagtctcagtcaaccaccaggctgccagcaagcagcaacattggtcaa
tttacctgtcaatcacccgatgcagtcaccacaccagcccactcccgttctgtccaatca
ggctcctctgtgccctttgaccttagcctgtctcaaagaagctccaacaccagcagagcg
tctctcactgatgaccgacagagaggctactctgctggtaacatgaacctagtttctctg
atgggccctcaacatgggaacattcaacatacatcatacccatcaggtccccagtcaacc
tctagctacacttcatctgtgtgtggtgtgaagagccagtatgtatctggaggctccatg
gcagccagggctagccacttcatcccagccaacaaccctctggtcacctctctcctccag
gggaaagagatccctctggaacagatcctccccaagccgctggccaaggcagaggtccaa
gtggcccaggccaaaccctcccatgatgacaaatggaagataaagtcccacagcacagcc
gggacagccagtggtgaaagccagagtcagtacctacacgttggtagtgtggatgactac
agtagatctaaacagcaaggatccataggccagtctcccttatttaagttggcagagctc
cagcaccatcaaagggaaacacctaacaaagacacccaggagcagatcctccaggctctg
atgcagaggaccacccagcagcaccagaaccagccgtatggggtctcaggcgcaggcggg
gctcagcgtacccagtttggagcctgtaatctggggcaccaggaggagtgtggggaccgt
ccccggttctccgctgggttccctggacggaagaggatgtccaggcctgccatgtcaggg
cactacctcctcaatgtctccacgtacggacgaggctcagagagcagtaaaagctcccac
ccattggccaccgctaacacctcactgacccctcaggccaatctgaagagagaacacaca
gagggagaggagctggctgacgaatgggaggagtcagtggagaataagcctcattctcat
tctaactcagcgggaggagtcaagatggaacagcagggcttctcaatcacaaaaatgggt
gaagctctgggctttcaacactgttccaggataaaatctgagtctccatcggtggagggc
tgtctaccggagcaggaggacaacagttcagccagtacagagagagacagtggcacttct
gcaagagccaaagaaaccaaccttttcacccaatcacagcacaggtggcacctggaactt
tgcaatagtaaactgggtggtcattgtgagccatatcgggtatctatatctccccacgtg
gggaccatggaccccagtcaccccagtactcaccagcattcgtctgcctttcaaaccgag
agacctccaatcgataatcaggaatccatggtggggtcctgctacggtggcaccatcagc
atgtctgtacctcacgctctgagtctgaaccacagtgctgctgtttcaagcaccgcttcc
agcgcctccccctctgtgtcaggtagtggtggggacagcggcagtggcaccagcagtgtc
atgtctttctcagtgaccgtcactaccatacctgccggtcacccattggaccacagaagc
cagggggaggggtctccagagcaggggtttatggcgggatctggtatagaggacgttcag
tctaaatgctactgccgactcaaagctatgatcatgtgtaaagggtgtggggccttttgc
catgacgattgcattggcccttcgaaactctgtgtctcgtgtctagtggtacgataa
DBGET
integrated database retrieval system
