Coregonus clupeaformis (lake whitefish): 121553525
Help
Entry
121553525 CDS
T08357
Symbol
fam83ha
Name
(RefSeq) protein FAM83H isoform X1
KO
K23931
protein FAM83H
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121553525 (fam83ha)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121553525 (fam83ha)
BRITE hierarchy
Motif
Pfam:
FAM83
PLDc_2
Motif
Other DBs
NCBI-GeneID:
121553525
NCBI-ProteinID:
XP_041722637
LinkDB
All DBs
Position
37:6213420..6248130
Genome browser
AA seq
1677 aa
AA seq
DB search
MAHRSQCSSAGDNPLDSNYLPPHYREEYRLAIDALVEDDLEGYYEFLQSADVVDFLSRQE
IEHIKCTVQVPYQSIQPELPYVESGGDGSSDTYWPVHSDLDAPGLDLGWPQQHRFIGPTD
VTTLVNPSEPDMPSIKAHARRLIKNAQQVIAVVMDTFTDVDIFADILDAAMRNVAVYIIL
DEQNAHHFTTMASNCRVNLDSIQLMRVRTVSGITYHCRSGKSFKGQMMDRFLLTDCRAVL
SGNYSFMWSFEKLHRCMAHLFQGQLVTTFDEEFRILFAQSQPLVPENVLVLMPHYSSLSD
SQYSTDRTPLFSDPRKFLPIESSRAEEWARHSSDGHMDMVKKMMPLGRCEPIHRSLDQGQ
LDMYSNEYSSQQLKMEQQSFMAQGHPVMQSNTMEFAGSKRHSYAEGTYARHSSSQFMQHQ
AMHSFEGGMATQNRNIHREQHHYQRTGLEPGYSGYDQFRDQGYPLMDQYSESGYPHGIEI
EPPDNYDPVLNYLSSSNLAVELGHGSNKLSRPGEGPFSQSNPKRLSASQPHACQTSPTQQ
NPFEQKQFFVGSGSDHKTRDPNAKQGMRDWRISSYLSAYDDAGEEDIPQSMGNDPFQEPL
NPSQGKLFAPLVSDPRFSAKELPKIPGLRLNKPTHPEHSRTPDILDSLATDARTTLKPPS
ESSSTTEGDKSEEMDVKEPKREESFRRRFNPVIQRTSRLRSSLIFSSQLEQHISQEHKLT
SGQHCEETANEEDDQSRLSLTTQILGKRRSITREPFEWRLKSVTVDNSTIESLKSEDIST
DTGDKELPKNPPVGTDMVSSMEQPNPAHKEQTKMVQSAHPSKPAQVEQPKTIQSAHQASS
LSNTAYIDMNDPDRRLHFFKELAAKRKAAKAAESESSAEKAPVKPVTPFDLKIKDPVTRV
EPNLPMAPLNPADTSTKKPAPSTETPLNPADTSTKKPATSTEAPLNPADISTKKPATSTE
ASSEKIETSPVSQESKTSMATCGSLHLDVKNQASKNNEQEDLHLPKTDSKTFLRDKLSCV
DGLLRVSTDTEKIELKNSQNQSVSKVNPRDASAFPKSTSKERTFNIAPKDFKLSPKKPKS
FNPASNELNPSLPLTLIEASSSSYPKPKSSSSTSPTSSKNAGKESSSALTPTLKEASSSN
PTSKQPLPSSKPITVESNVPLSPTQSESRFSPHPVPSESSTSPFTIPLQSSPPPIPHPVE
PVVSPKPDKTDSKESLSPTPIQSCSSSIPVTEFSPPPNPTQTESSFLPKSTLVGSTSSTP
MESNTSPKPSTKESLSTIATTELRSPSPKTNPIKSYSSPSPGQHESVLSPKRSKTACNSS
PKPTTTSNNSSNSSPPSSKHSMEETNKSPILTPTKSNSPPEPTPTESSASSNPTPRELNS
LPSTTPTEPSASTGPTPTESSASSNPTPTKSHSTPTCGSGGSVVCPKPGQTKSITSPNLT
QKESCSSPNYTLTEPTSPFNPVLVESVQSSNSNPTESTASHDTVPAPPVVVVNSKEGKPS
NLNKEQKAGSSAASKGEKKAGNPETTSKTAPGESASHGPLSPDETRENNSTMKPESTIDQ
GNPISPPAKQAKVSQSHYHSYTANVLSSSNLRDDTKLLLEQISANSQSRTELTKESAVTD
DAKQDEADRGVSGKEEASAQRQIGGPTRTSQEREKLLQRIESMRKERKVYSRFEMAP
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccgctctcagtgttcctcagccggggataaccccctggactccaactacctg
cctccccactaccgcgaggagtaccggctggccattgacgcacttgtggaggatgacctg
gagggctattatgaattcctccagagtgcggatgtggtggacttcctttccagacaggaa
attgagcacattaagtgcacagtgcaagttccgtaccagagcattcagcctgagctcccg
tatgtggagtctgggggagacggctcttcagacacatactggcctgtccactctgacttg
gatgcacccggtcttgaccttggctggccccaacagcatcgcttcataggccccaccgat
gtcaccacactggttaacccctctgagccagatatgccaagtatcaaggcgcatgctcgt
cgacttatcaagaatgctcaacaagtgatcgctgtggtaatggacacctttacagatgtg
gacatctttgctgatattctggacgctgccatgcgaaatgttgctgtgtatatcattcta
gatgaacagaatgcacaccatttcactaccatggcttccaactgccgggtcaatctggac
agcattcaattaatgcgtgtcagaactgtgtcaggcatcacctatcactgtcgctctggg
aagtccttcaagggtcagatgatggatcgcttcttgctgacagactgcagggcagtcctg
agtggaaactatagcttcatgtggtcttttgagaagcttcaccgttgcatggctcacctc
ttccaaggacagcttgtgactacttttgatgaggagttccggatcctgtttgcacagtcc
caacctttggtacccgaaaatgtccttgttctaatgccacactacagcagtttatctgac
agccaatacagcactgatcggacaccattgttcagcgatccaagaaagttcctccccata
gagagctctcgtgctgaagaatgggctagacattcctctgatggccacatggatatggtt
aaaaaaatgatgccccttggaaggtgtgagcccatccacaggtcactagatcagggtcaa
ctagatatgtacagcaacgagtactcctcccagcaattaaaaatggagcagcagtcgttt
atggcacaaggtcaccccgtcatgcagtcgaacacaatggagtttgctggctctaaaagg
cacagttatgcagaaggcacttatgccagacattcctcctctcaattcatgcagcaccaa
gccatgcacagctttgaggggggtatggcaacccagaacaggaatatacatagggaacag
catcactatcagagaacagggctagagccaggttatagcggctacgatcaattcagggac
caaggttaccctctgatggatcagtattctgagtctgggtacccacatggaatagagata
gagccaccagacaactatgaccctgtactgaattatttgtcatcatcaaaccttgcggtg
gagctaggacatggctcaaacaaattatcaagaccaggagagggtccctttagtcaatca
aaccccaaaagactgagcgcgagccagcctcatgcctgtcagacctccccaacacaacaa
aacccatttgaacagaaacaattttttgtcgggtctggttcggaccataaaacacgggat
cccaatgcaaagcaggggatgcgagattggaggatcagctcatacctcagtgcatatgat
gatgcaggagaggaagacattccacagtctatgggaaatgacccctttcaagagcccctt
aatccatcacaaggcaaattatttgctccactggtatcagatcccaggtttagtgccaaa
gagttacccaagattccagggctcaggttaaacaagcccacccacccagaacactcaaga
acaccagatattcttgatagcttggcaacagatgccagaacaacactaaaaccaccttcg
gagtcgtcatcaaccactgaaggtgacaaatcagaagagatggatgtaaaagagcccaaa
agagaagagtcattccgtaggaggttcaatcctgttatccaaaggacctctagactaaga
tcctcactaatcttcagctcacaactagaacagcatatctcacaggaacataaacttacc
tctggccaacactgtgaggaaactgccaatgaggaagatgaccaatctagattatccttg
accactcagattttgggaaaaagaagatccattacaagagaaccttttgaatggagactg
aagtcagtgacagttgataattcaaccatagagtctttgaaatctgaggatatctctact
gatacaggtgataaggaattgccaaagaatcctcctgtgggcaccgacatggtttcttca
atggaacaacctaatcctgcccataaagaacaaaccaaaatggtacaatctgcacatcca
tccaaacctgctcaagttgagcaacccaaaaccatacaatcagcacaccaggcatcttca
ttgagcaatacagcctatatagatatgaatgatccagacagaaggttacatttttttaaa
gagttggctgccaaacgaaaagctgcaaaggctgcagagtctgagagcagcgctgaaaaa
gctcctgtaaaaccagtgactccatttgacttgaaaattaaggacccagttacaagggta
gaacctaaccttccaatggccccactaaatccagcagatacttcaaccaaaaagccagct
ccatcaacagagaccccacttaatccagcagatacttcaaccaaaaaaccagcaacatcg
acagaagccccacttaatccagcagatatatccactaaaaagccagctacatcaacagag
gcctcatcagaaaaaattgagacttcaccagtctcacaggagagcaaaacatccatggca
acatgtggctcattacatcttgatgtcaaaaaccaggcttctaaaaataacgaacaggaa
gaccttcatcttcccaaaactgactccaaaacattcctcagggataaattatcttgtgtc
gatggactacttagagtctctactgatactgagaagattgagctgaagaacagtcagaac
caaagtgtgtctaaggttaaccctagagatgcaagtgcatttcctaagagcacctcaaaa
gagcgtacctttaacatcgccccaaaggatttcaaactatctccaaagaaaccaaagtca
ttcaatcctgcttcaaatgagctaaacccatctcttccactcacgctaatagaagctagc
tcatcttcatatccgaaaccaaagagttcgagctcaactagtcccacttcatcaaaaaat
gcaggaaaggagtcgagctcagctcttacccccacccttaaggaggccagttcatctaac
cccacgtcaaagcagccattaccatcctctaaacctatcacagtagagtccaacgtacct
ctgagccccacccaatctgaatcaaggttctctcctcatcctgttccatcagaatccagc
acctccccttttaccatcccattgcaatccagtcccccccctattcctcatccagttgag
ccagttgtgtctcccaaacctgacaaaacagattccaaggaatctctcagccctactcca
atacaatcttgctcatcctcaatccctgtaacagaatttagccctccgccaaaccctacc
caaacagaatctagtttcttacccaagtccaccttagttgggtccacttcatcaacacca
atggaatctaacacctctcccaagccctccacaaaggagtcattgtctacaattgccaca
actgagttgaggtcaccctctcctaagaccaacccaataaaatcctattcctcccctagt
cctggccaacatgagtcggttttgtcacccaaacgttccaaaacagcatgcaactcctct
ccaaagcccactacaacgtccaacaactcttccaactcttcacctccatcttcaaagcat
tccatggaagaaactaacaaatctcccatcctcacaccaacaaaatctaactctcctcct
gagcctactccaacagaatctagtgcttcttccaatccaacaccaagagaactcaactct
cttcctagcaccaccccaacggaaccaagtgcatctactggccctaccccaacagaatca
agtgcatcttctaacccaactccaacaaaatcacactccacccctacatgtgggtcaggt
ggatcagttgtgtgtcccaagcctggccaaacaaaatccatcacttctccaaacctcacc
caaaaagaatcttgttcctctcctaattataccctaactgagcctacctcaccattcaac
cctgtccttgtggaatctgtacaatcaagcaactcaaacccaactgaatccactgcctct
catgacaccgtcccagctccacccgtcgttgtggttaacagtaaggagggcaaaccaagt
aaccttaacaaggagcaaaaagcgggaagttctgcagcttctaaaggtgagaagaaagca
ggtaatcctgagactacgagcaaaactgctcctggagaatctgcctcccatgggccgctg
agtcctgatgagaccagagagaataacagcactatgaaaccagagagcacaatagatcaa
ggcaatcccatatcacccccagcgaagcaagctaaagtaagccagtcccactaccattca
tatactgccaatgtactctctagcagcaacctaagagatgacacaaagctcctattagag
cagatttctgctaacagccagagcaggacagaactcactaaagaatctgctgtcactgat
gatgccaaacaggatgaggctgaccggggtgttagtggtaaggaggaagcatcagcccaa
cgacagatcggaggcccgactagaacttctcaggagagggagaagcttcttcagagaatc
gagagcatgcggaaggagaggaaagtctacagccgctttgagatggcgccttaa
DBGET
integrated database retrieval system