Coregonus clupeaformis (lake whitefish): 121560977
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Entry
121560977 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: protein FAM193A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Motif
Pfam:
FAM193_C
Motif
Other DBs
NCBI-GeneID:
121560977
NCBI-ProteinID:
XP_045067353
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All DBs
Position
36:complement(41952432..41982670)
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AA seq
1619 aa
AA seq
DB search
MSPTDAKRGAKRRKNKRGGGSSSCSSTVCSTSGKAGVSATALCPQATETPVSAMGFLTSG
SSGNGNMASITGLNGEVPMNGNVTPQFSEGPVNSDFSGVLQTPFTFGLSQRAPYSTTGDR
CLLCRSERKPDSTLHPDTGLPGAGQNGMAQSPKSPSALQLPLWVCPDCRRTVEKEDRHAA
LEQSLVSQDFLLHMPVGNGGLGQELPAAGGRLTNGGTPPTLPTLPAPDLTIPMTADTVCS
CEACNERREISAESERESQQLQNHWSEVRYLVRCIYRQTGTPLSDDHDQSLDRDKEGMKE
LVDRLCEKDPYQLYQRLEQQAREYVLEMKVRLLKHLSTSSKAAAAAAQGPPQAHQFISLL
LEEYSALCQAARTISSFLLTLENEHLQKFQVTWELHNKHLFENLVFSEPILHSSLPALVA
QLRHGMASHDLYSEDMYRTLLESYQQLEQEMAAVAAKWQECEKRIDDYVDEQLLFKVEGQ
NLTNQRTEPHKSLISKNTLKTKQRMLKEDWEFFKQRRFIEEQLTNSKKSLAGDSNFTDTM
RMLSSRLSIPDCPNCNYRRRCTCDDCSLSHILTCGIMDSPIAEDLHIKLPLQVTEPPQHR
DYLAEVHPPSLSSGGSSASASASSSPITIQQHPRLILPEGVVTTFGSDDDEVPPLLGKFA
DIPYPMGGYEDPGVVAGMNGLHSELNGGGXNMALKDESPGGSSSSSSSSVGDEEEADGEN
GGEPPGQRGELSPGKRNSPPPYYPQQQVQQHACECHVCNQDLSSLAPWAQLPPPPVGSTR
PLRPPTVLHRGGDKTPSHPALHLYPHIHGHLPLHNLSHLPRPLLHPTLYPSPTLSHSNPL
PPAPMSSHTGPKQQAFSPSLPDHVYQNCFGGGAGDWNSSLQCLSLKFENICDAAMMKNWN
PSVLLQEPLPGDMLGPPLHPDVPLPPPSSSGYGDHTHIASSEPTPLHLLPPSPSDQQQPL
PRERKNGAKKKCLYNFQDAFLEANKVVMATSASTASVSCTATTVQSSNNHIQVSSKRPNS
LGDVFHNIGKEDHRQQPTPIAPRNSPTGLASLPSLSSGPALPPAPGPTTQHHYPSMGSQP
FPTTATPAPGFMEAHHQGMCLSPAEPPSAAPADGTISAPPSVCSDPECEGHRCEGNGAYD
HQGYDGEESQDEDSCSEHSSSTSTSTNQKEGKYCDCCYCEFFGHGGPPAAPTSRNYAEMR
EKLRLRLTKRKEEQPKREEQPAVVERDSGADGVEDHRRVEDLLQFINSASDNKPASSSKA
AKRARHKQKKMEEKVRXEAEAREREEQQEQRLLEEQRRREEEEALQRELLRLQELQHLRV
AKKKKKEKAKELATPXPRPVPQNNPQPLKQTAQNVLENLRNGKSQLLHSLMRLPGHKDPR
LEHRSQPRPQPPPSQDSPKSSREKAPTPAPFLHNGTSAAPQPTEAKPKQQQPIRQAASET
TNVKKAPEAPKMVTTTNCTPQLPPDAKVTRPRLPAEDSVAPPAPGPRKEERSNGKRQHHQ
QSASQVKEERSQPLLEPSPPRASQTEQPQQNSKPLSAESPQPKAKAKKNKKKKADKTNNS
IDDVFLPKDIDLDSTDMDETEREVEYFKRFCLDSARQTRQRLSINWSNFSLKKATFAAH
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaaccgatgctaaacgaggagctaaacgcaggaagaacaagcggggcggtggc
agcagtagctgcagtagtactgtctgcagtaccagtggcaaggccggggtttcagccacg
gccctgtgtcctcaagccacggaaacacccgtgtctgccatgggctttttgacatcaggg
agctctggaaatgggaacatggcctctatcacaggcctgaacggagaggtccctatgaac
ggtaacgttacgccacagttttcggaggggccggtgaattccgacttctctggagtcctt
cagaccccgttcacatttggcctgagccagagggccccatactccaccacaggcgaccgc
tgcctcctgtgccggagtgagcgcaagcctgacagcacactccatcctgacacggggctc
cccggggcggggcagaacggtatggcgcagtcccccaagtcccccagcgctctgcagctg
cccctgtgggtgtgccccgactgccggcgcacggtggagaaggaggaccgccacgccgcc
ctggagcagtcgctggtgagccaagacttcctgttgcacatgcctgtgggtaacggaggc
ttgggccaggagctgcccgccgcggggggcagactgaccaatggtggcacgcccccaacc
ctcccaactcttcccgccccggacctcaccatccctatgactgctgacacagtgtgcagt
tgtgaggcctgcaacgagagacgggagatttcggccgagtccgagcgcgagtcccagcag
ctgcagaaccactggtcggaggtacgctacctagtgcggtgcatctaccgccagacaggc
acgccgctgtccgacgaccacgaccagtccctggaccgcgacaaggagggcatgaaggag
ttggtggacaggctgtgcgagaaggacccgtaccagctctaccagaggctggagcagcag
gcccgcgagtacgtcctagaaatgaaggtgcgcctgctcaagcacctgtcgaccagctcc
aaggctgcagcggccgccgctcagggccccccgcaggcccaccagttcatctcgctgctc
ctggaggagtatagcgccctctgccaggctgcgcgcaccatcagcagcttcctccttacc
ctggagaacgaacacctgcagaagttccaggtgacgtgggagctgcacaacaagcacctt
tttgagaacctggtgttctccgagcccatcctgcacagcagtttaccagcactggttgca
cagctgaggcacggcatggcctcccacgacttgtacagcgaggacatgtacaggaccctg
ctggagagctaccagcagctggagcaggagatggccgccgtggcggccaagtggcaggag
tgtgagaagaggattgacgactacgtcgacgaacagctgctttttaaggtagagggccag
aatctcacaaatcaacggacagaaccacataagtctttaattagcaaaaatactttgaaa
acaaaacaacggatgctgaaggaagactgggaattctttaagcagaggaggtttatagaa
gaacagttaaccaacagtaagaaatctttagctggtgacagtaactttacagacacgatg
agaatgctctcctctcgtctcagcattccagactgtccaaattgcaattatcgaagacga
tgcacctgcgacgactgcagcctctcccacatcctgacgtgcggcatcatggactcgccc
attgccgaggatctccacatcaagctgccgcttcaggtcacggagcccccacagcaccgg
gactacctggctgaggtgcacccccccagtctctcctccgggggcagctcagcgtccgct
tcggcctccagctcccccatcaccatacagcagcacccgcgcctcatcctgccagaaggg
gtcgtcaccacctttggtagcgacgatgacgaagtgcctcctctgttgggcaagtttgcg
gacatcccctaccccatgggcggctacgaggacccgggggtggtggccggcatgaacggc
ctgcacagcgagctcaacggtggcgggnagaacatggcgctcaaagatgagtctcctgga
gggagcagcagcagcagtagttcgtcggtgggcgacgaggaggaggctgacggggagaac
ggcggggagcctccggggcagcggggggagctctccccagggaagagaaacagccctccg
ccctactacccccagcaacaggtgcaacagcatgcctgcgagtgccatgtgtgcaaccag
gacctgtcctccctcgccccctgggcccagctcccccctcccccagtcggctccacgcgc
cccctccggccaccaacagttcttcaccggggcggcgacaagacccccagccacccagcc
ctccacctctacccccacatccacggccacctgcctctgcacaacctctcccacctgccc
cggcctctactgcaccccacactctaccccagccccaccctttcacacagcaatcctctc
ccccctgctcccatgtcgagccacactgggcccaaacagcaggccttcagcccctcccta
ccggaccacgtctaccagaactgctttggcggcggcgctggcgactggaacagctcgctg
cagtgcctctcgctcaagttcgagaatatctgcgacgctgccatgatgaagaactggaac
ccatcggtgctgctgcaggagcccctgccaggggacatgctgggaccacccctccacccc
gacgtgcccctccccccgccctcctcctccggctacggggaccacacccacatcgcctca
tctgagcctaccccccttcatctccttcccccctcgccatccgatcagcaacagcccctg
cccagggagaggaagaacggcgccaagaagaagtgtctctacaatttccaagatgccttc
ctggaggccaacaaagtggtgatggccacctctgcctccactgcctcagtctcctgcaca
gcaaccactgtccagtcaagtaataatcacatccaagtttcatctaaaagacccaactcc
ttaggtgacgtatttcacaatataggtaaagaggaccataggcaacaacccacccccatc
gcccctaggaacagtcccacgggcctggcctccctcccttcgctctcatctggcccagcc
ctgccacctgcccctggccccaccacccagcaccactaccccagcatgggctcgcagccc
ttcccaacgactgccaccccggctccaggcttcatggaggcccaccatcagggcatgtgc
ctgtcacccgccgagccgcccagtgccgccccagccgacgggaccatcagcgccccaccc
agcgtgtgcagtgaccccgagtgcgagggccaccgttgtgagggcaacggggcgtacgac
catcagggctacgacggcgaggagagccaggacgaggacagctgctcagagcacagctcc
tccacctccacctccaccaaccagaaggaagggaagtattgcgactgctgctactgcgag
ttcttcggccacggcgggcccccggcggcgcccaccagccgcaactacgcggaaatgcgt
gagaagctgcgcctacggctgaccaagcggaaggaggagcagcccaagagggaggagcag
ccggcagtggtggagcgcgacagcggcgctgacggcgtggaggaccaccggcgggtggag
gacctgctgcagttcatcaacagcgccagcgacaacaagcccgcatccagctccaaggcc
gccaagcgggcccgccacaaacagaagaagatggaggagaaggtgcgtnctgaggcggag
gctcgcgagcgggaggagcagcaggagcagcggctcctggaggagcagcggcggcgggag
gaggaggaggccctccaacgggaactcctccggctgcaagagctgcaacacctccgcgtc
gccaagaagaaaaagaaggagaaagccaaggagctcgccacccccnntccccgccccgta
cctcagaacaacccccagcccctcaaacagacggcccagaacgtcctggagaacctccgc
aacggcaagagccagctcctgcacagcctcatgcgcctccctggccacaaggatccccga
ctggagcaccgatcccagccccggccccagcctcccccctcacaggacagcccaaagagc
agcagggagaaagcccctactccggcccccttccttcacaacggcacatccgccgcacca
caaccgactgaggccaagcctaaacagcagcagccaatcaggcaagccgccagcgagaca
acgaatgtcaagaaagccccagaagcgcccaagatggtgaccaccaccaactgtacacca
caactaccaccagacgccaaagtgacccgacccaggcttcccgcagaagactcggtcgcc
cctccggcaccgggacccaggaaggaggagaggagcaacgggaaaaggcagcaccatcag
cagtcggcgagccaggtgaaagaggagaggagccagcccttgttggagccctccccaccc
cgtgcctcgcagacggagcagccccagcagaacagcaaacccctcagcgcagagtccccc
cagcccaaggccaaggccaagaagaacaagaagaagaaggccgacaagacaaacaactca
atagatgacgttttcctgcccaaagacattgatctggacagtactgacatggacgagact
gagagggaggtggagtatttcaaaaggttctgcttggattccgccaggcagacccgacaa
cggctgtccatcaactggtccaactttagcttgaagaaagcaacgttcgccgcccactga
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