Coregonus clupeaformis (lake whitefish): 121563988
Help
Entry
121563988 CDS
T08357
Name
(RefSeq) LIM domain only protein 7-like isoform X1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Motif
Pfam:
CH
DUF4757
PDZ
LIM
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
121563988
NCBI-ProteinID:
XP_045073852
LinkDB
All DBs
Position
6:6892135..7023872
Genome browser
AA seq
1405 aa
AA seq
DB search
MEWRQRTSVSCEDAFTEAQRWMEEVTSKSFGCNNFRSALENGVLLCHLINRLKPGIIKRM
NTLSTPMAGLDNVNVFLRACGTLGLHEAQLFHPGDLQDLSTRATLRRVEGKRRLKNVLIT
IYWLGRKAQVDPFYSGPQLNLKAFEGLLGIALSKALEEAPRGSVRASGSSEVCYPEREDQ
LLPLTHSQPPGYSREDQLLPLTHSQPPGYSREDQLLPLTHSQPPGYSREDSVESFKSVLS
FDSVESRTLSFMSDSILRAGSEDSSSDAEAENCFRMESAEGRDSGQSNGGIVPASLQRKK
QEEYPIKGYPPSLLTRSKSLNDIRRFPSATVVLRQVSEGGVELSPSAVSQDQLQRVRARV
QESEVKWHNDLTKWKLRRCRSNFDLRRKIQERDNNVLMANAGVVTVGTFRSLQEDREEDE
EAPYSSSHATVSPSTSAKDGSLDLRPHTRAPPALSSSVESPYSPGASEPSTTPSVTLQAR
GPSARAAPRSEPLVLGERRHTGTPVDPDAAGGLAPTLSSASPLSSQTRGRAISSPALMIS
TGLDQNTSMLSNGIPTTLTNGIGSGFTTGTSSSPTASGLVNGTGSNLTDGTSSNRRSASK
ALLSALETQTSVVEPDSGRVSAPQQQDLPLFRYSSRVPGGAGVSASLPRGYRRSESSSSL
SAGFTPRPFGSKPSRVSSIPRLYNYLQLENPTLNGDRNASLLPTKTAPSRPQKMVTISEV
AVGAQPRAPANRSGVNQEVKEEGASQTQPSILNARVGPGPATRPKPSREGPLPPPLLPSL
AVSVTQNGSAQVRHSDRVSLTLKLNGRPDFGFNTHWDSAGVRVGGIQPGSPAELGQLRAG
DEIVSVGGHRVAEMSHDQWKGTMTSALQKGSLTMDVQRYGNNDWGSGLPSHKIINLTSGA
PTLIGRPDASRDAVISTATRVKPAQLNGQEVNCVTSKSMKGGVRDDPVTIRRKEHELIVL
KTQERRAEFFKQKGGSASAISDLQVPSLSTSPSSWSWDPEEERSRQEKWQQEQERLLQER
YRQDQERLDAEWQRAQEEAGVAGYSQAEVTPEPSPSRDVVGNVVPRVKSPASNAESSGEM
TNGIAGPASPQPVLSQPTPPVAHVASNQKKEVVFNGVGREEPDVKEAEQEEETDGLAEGD
DWSGDTYGFTQLSTADRMKSKSSSSLDGFHRQEMKGGTREVPRRKQRQSMSLVEADRQQI
LEEMKRRTALLTDNSWIRQRSTSINKQPVNRRGPMRRYESLDNLPSTTSSPSLPSNPQRP
HSSLGFTAPYRPPSSRHSMGGALGGYSNGTQKHSPTWPRPFSTSSTPPNPGEEPATGESR
PGSQQRDRVGTSRQVCSVCDCPLGRGAVMVIETLSLRFHLACFQCVDCQCHLGGSEVRTQ
IRIRNRKPYCEPCYIRLKSRLASSL
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgacaacggaccagtgtgagctgtgaagacgccttcactgaggctcaacgg
tggatggaggaagtgactagtaaatcgtttgggtgcaacaacttccgctcagccctggag
aatggagtcctgctctgccatctaatcaaccggttgaaaccaggcattataaagagaatg
aacacactgtctactcccatggctggactggacaatgtcaatgtgtttctgagagcgtgc
ggtacgctgggtctgcacgaggcccagctgtttcaccctggagacctgcaagacctgtcc
acacgcgctacactcaggcgtgtagagggcaaaaggaggctgaaaaacgttctaatcacc
atctactggctggggcggaaggctcaggtggaccccttctactctggtcctcaactcaac
ctcaaagcattcgagggactattgggcatcgctctgtccaaggctctagaagaggccccc
agaggcagtgtgagggccagtggctccagtgaggtgtgctacccagagagagaggaccag
ctgctaccgctaacccactcccagccacccggctacagcagagaggaccagctgctaccg
ctaacccactcccagccacccggctacagcagagaggaccagctgctaccgctaacccac
tcccagccacccggctacagcagagaggactccgtggagagctttaagtctgtcctgagc
tttgactcggtggagtcacgtaccctcagctttatgtctgactccatcctgagggccggc
agcgaggactccagcagtgacgcggaggcagagaactgttttaggatggagtcggcggag
ggcagagactctggacagagcaacggggggatcgtacctgcatccctccagaggaagaaa
caggaggaatacccaattaagggctacccccccagcctcctcaccaggagcaagtcgttg
aatgacattaggcggttcccgtcggccacggtagtgttgcgccaggtttctgagggtggc
gtggagctaagccccagcgccgtgagccaggaccagctgcagagggtccgagcccgggtc
caggagagtgaggtcaagtggcacaacgacctgaccaagtggaagctccgtcggtgcagg
tctaactttgacctgcggaggaagatacaggagagggacaacaacgtcctgatggccaac
gcaggggtcgttacagtcgggacattcaggagcctgcaagaggacagggaggaggatgag
gaggccccatacagcagtagccacgccactgtctctccctccacctcggccaaggatggt
tctttggatctccgaccccacaccagagccccgccggccctcagctcctccgtggagtct
ccctacagccccggagcctcggaaccctccaccacccccagcgtgaccctccaggcccgg
ggaccgtcagccagagccgcgccccgatcagagcccctcgtcctgggggagaggcgtcac
acaggcacaccggtggatccagacgcagctggtggtttagcccccaccctctcctctgcc
tctcctttgtcctcccagacccggggccgggccatctctagcccagctctcatgatctcc
actggactagaccagaacacctccatgctctcaaacgggatccccacgaccctcacaaat
ggaattggctcaggctttaccactggtaccagttcttctccaactgcctctggcctggtg
aacggtaccgggtcaaacctaaccgacggcaccagctccaacagacgctctgcctccaaa
gccctcctctctgctctagagacccagacgtcggtggtagaaccagactcgggccgtgtc
tcggctccccagcagcaggacctccccctcttcaggtacagctccagggttccgggaggg
gctggggtgtccgcctctctccccaggggataccgccggtctgagagctcttcctccctc
tctgccggcttcacccccaggccgtttggatccaagccctccagagtgtcctccatcccc
aggctctacaactatctacagttggagaaccctacgctgaacggagacagaaacgcttcc
ctgctccccaccaagacggctccctcacgccctcagaaaatggtcaccatctcggaggtc
gctgtcggggcgcagccccgggccccagccaatcggagcggtgtgaaccaggaagtaaag
gaggagggtgcgagtcagacccagccctccatcctgaacgccagagtggggcctggaccc
gccacccgccccaaacccagccgggagggacccttaccccctcctctcctgcccagcctc
gccgtctcagtcacacagaatggctctgcgcaggtacgtcacagtgacagagtgagtctt
accttgaagctgaacggtcgaccagactttggtttcaacactcactgggactcagcagga
gtgcgagtcggaggcatccaaccaggcagtcctgcagagttgggccagctgcgtgcgggt
gatgagatagtgtctgttggcgggcacagggtggcagagatgagccacgaccagtggaag
ggcaccatgacctctgccctgcagaagggcagtctcaccatggacgtacagcgctacggt
aacaacgattggggcagtggccttccttcccataaaatcatcaatctgaccagtggcgct
ccgacacttataggtcgacctgatgccagcagagacgccgtaatatccacagcaacaagg
gtgaaaccggcccagctcaacggacaagaggtcaactgtgtgacatctaaaagcatgaag
ggtggtgttcgtgacgatcctgtgaccatcagaaggaaagaacatgaactgattgttttg
aaaacccaggaaaggagagcagagttttttaagcagaaaggaggatcggcttcggcaata
tctgatctccaggtgccgtccctcagcacatccccctccagttggtcctgggaccccgag
gaggagaggagcaggcaggagaagtggcagcaggagcaggagcgcctcctacaggagagg
taccgtcaggaccaggagaggctggatgccgagtggcagcgagcccaggaggaggcaggg
gtggcgggatacagccaggctgaggtgacccctgaaccttcaccctccagagacgtcgtg
ggaaatgtggtccctcgggtcaaatcacccgcatccaacgcggagagctcaggagagatg
accaatgggatcgctggccctgccagtcctcagccagtcctgagccagcccacgccccct
gttgcccatgtggcatccaatcaaaagaaggaagtagtttttaatggggtaggaagggag
gagcctgatgttaaagaggcagagcaggaagaggagactgatggactggcagaaggagat
gattggtctggggacacctatggattcacccagctatctacagctgacaggatgaaatcc
aagtcctcctcgtccctggacggtttccacagacaggagatgaaaggcggtaccagggag
gtccctaggaggaagcagcgtcagagcatgtcgttagtagaggctgataggcaacagatc
ctggaggagatgaagaggaggactgctctactgaccgacaacagctggatacgacaacgc
tccacctcgatcaacaaacagcccgttaaccggcgagggccaatgaggaggtacgagtct
ctggacaaccttccctcaaccacctcctccccgtccctaccctctaacccccaacgcccc
cactcctccctgggtttcaccgccccgtaccgtcccccctcctctcggcacagcatgggt
ggggccctggggggttactctaacgggacccagaaacacagccctacctggccccgcccc
ttcagcacctcttccaccccgcccaaccccggagaggaacccgccaccggcgaatcacga
cccggctcacagcagcgcgatcgggtggggacttctcgtcaggtgtgttcagtgtgtgac
tgtcctctgggcaggggtgctgtcatggtcatcgagaccctgagcctccgcttccacctg
gcctgctttcagtgtgtggactgccagtgccatcttggagggtcagaagtcagaacccag
atccgaatcagaaacaggaagccttactgtgaaccctgctacatccgactcaagtcccga
cttgccagctccctgtga
DBGET
integrated database retrieval system
