Coregonus clupeaformis (lake whitefish): 121566997
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Entry
121566997 CDS
T08357
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121566997
03012 Translation factors [BR:
cclu03012
]
121566997
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121566997
mRNA cycle factors
Stress granule specific factors
121566997
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-4
121566997
BRITE hierarchy
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
121566997
NCBI-ProteinID:
XP_045067492
LinkDB
All DBs
Position
5:complement(31861831..31907185)
Genome browser
AA seq
1816 aa
AA seq
DB search
MNKAPQPLTGSPSAPHPVPSPGLQQPNFPPGQPPSVVFATPPPQMNPVPQPRQFVPGPRA
LHQQGGFRSLQPYYSRPSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQQIPFPNQQGP
AYFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYAGAYYSGQQQYTPSVPAAPVIMN
PPPQQQQPPPQQQIQSKRERKQVKIIIRDPNQGGKDITEEIMSGGTRSGTTPTPPQVSDD
SSESSISGSEGPAVAQANGENVTPVVVRPDDRGKPAATLITGPPAQSKTPELVKTAPTPT
EVKPPDTNSKSPSLPQDLPTPPRATTTLQNTAPTTPTPSTSPIADMMDAPAPAAAPAPSA
PEVPAYPAPLPEPCHTSAAEEHPSAAKEEREEIKEEVAEAREEVTTSSKPEPSLAPVTTP
SSSTNGMSAAQPPPAEEEEPSALSITMPSPQAAEPPLESPIAQPEELRLPNGLPLPSPQD
PEKVSAESSECDVSPIAEPEAAQLQREAPMPKPTPVAVTATPATVVKGTPAAPVVKGTPA
APVVKGTPAAPVAKGTPAAPVAKGTPAAPVAKGTPAAPLAQATPAPLAQATPAPLAQATP
APLAQATPAPLAQATPAPFAQATHVLAETATTTEVTALRVEDEMDSPPPQSNTPAGESSM
QAAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVESPPEPEQATPTSASDAEEPRPAAT
PAVEEVDETWEEKEDKLDAENIEPKPGDLKYQYKEELCRPIDPEEKKRYDRDFLLGFQFI
SVAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGMNMGTDFTPSFANLGRPGMGGGGG
GGGGGGGGGGGGHRGGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLTDDVKLNKAEKAW
KPAVKKAASGRAAPEEELDDPEEAKTKELFKRVRSILNKLTPQMFQQLMKQVTELTIDTE
ERLKGVIDLIFEKAISEPNFSVAYANMCRCLIGLKVPTTDKPGVTVNFRKLLLNRCQKEF
EKDKDDDVIFEEKQKELDAAATEEKDRLKAELEEAKDKARRRSLGNIKFIGELFKLKMLT
EAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFTQMDKIIKEKKTS
SRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKEAELEEHREVLKVQQQLLNQNTRGG
GGGRGGGGGGGGGGGGRDQGSRGGQHPQAGQRSQPQDEGWNTVPISTKSRPIDTSRLSKI
TKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEVTPESGGRPATSTLNRFS
ALQPQQPSSSGPSHDSDRRVPHRNSSSRDRGSDRFERHDRGSNDRFDRRDDRDRNRPPVT
KRSFSRESEEHGREREHSGPADPVRRVASMTDDRGSRDRARSKENVKREAAPTPPPPQTK
PALSEEELEKKSTAIIEEYLHINDMKEALQCVVEMNSTPLLFVFVRSGLESTLERSPIAR
ERMGLLLHQLYKAGTLPKEQYYRGLQEILEVAEDMVIDIPHIWLYLAELITPMLHEGGIP
MGQLFKEISKPLVPQGTAGVLLVQILTLLCKGMSHKKAGTMWREAGLSWKDFLPEDEDAN
KFVTEENVEFTLGGGRGDDDDDDDETEKSSKKELSSEELTKQLDRLIQDKAENQRIYDWV
EANLDKTQMSSNVFVRAVMTAICQSAIICENPYKLDARVITRRAKLLHKYLKDEQKELQA
LYALQALMVEMEQPANLLRMFFDTLYDEDVIKEEAFYKWESSKDPTEMQGKGVALKSVTA
FFTWLREAEDEESDNS
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctttaacgggatccccatctgccccccaccctgtcccctcc
cctggactccaacagcccaacttccctcctggacaacccccctctgttgtctttgccacc
ccaccgccacaaatgaacccagtgccacagccccgacagttcgtccccgggccccgtgct
ttacaccaacagggaggattcaggtcactgcagccgtactacagccggcccagcaatgcc
ccccgggtgccccccagcagcacgccgaggcccgtggcgcccacacacgtctaccagccg
ggccaacagatgatgatgatcccctcacagcagatccctttccccaaccaacagggcccc
gcctacttcatacccggacagtaccggtcaacgtacgtggccacccctcagcagtacccg
gtcccgccgggcaccccaggcttctacccaggcaccagcccagctgaatatgcaggggca
tactactcgggccaacagcagtacacgccctcagtgccggctgctccggtcatcatgaac
cctcccccccagcagcagcaaccacctccacagcaacagatccagtccaaaagggagcgc
aaacaggtaaagatcataatacgagaccctaaccagggtggtaaagacatcactgaggag
attatgtcagggggcacccgcagtggcaccacccccacacccccacaggtgagcgacgac
tcttcagagtcgtctatatctggatcagagggcccagccgttgcccaggccaacggtgag
aacgtgacacctgtcgtggtcagaccagatgacagagggaaacctgcagccactctcatc
actggccccccagcccagtctaaaacccctgaactggtcaagactgcccctacccctaca
gaggtcaaacccccagacacgaacagtaaatctccttccttaccccaggacctacccaca
cccccacgggcaactaccaccctccagaatactgcccctaccacccccacaccctcaact
agtcccattgcagacatgatggacgcgccagccccggccgctgctccagccccatctgcc
cctgaagtgcctgcttaccctgcgcccctgcctgaaccctgccacacttctgcagccgag
gagcatccctcagccgccaaggaggagcgggaggagattaaagaggaggtggcggaggct
agggaggaggtgactacatcatccaaacctgagccttcccttgctccagtgaccacccct
agcagcagcactaacggtatgtctgcagcacagccccccccagccgaggaggaggagcca
tcagccctgtccatcaccatgccctccccccaggcagcagaaccccccctggagtctccc
attgcccagccagaggagctcaggctgcccaatggcctgccgctccccagcccccaggac
cctgagaaggtgtctgcggagtcgtcggagtgtgacgtcagccccatcgctgagcctgag
gcggcccagttacagagggaggcacctatgcctaaacccacgcctgttgccgtcacagca
acgcccgccaccgttgtcaaggggacgcccgccgcccccgttgtcaagggtacgcccgcc
gcccccgttgtcaagggtacgcccgccgcccccgttgccaagggtacgcccgccgccccc
gttgccaaggggacgcccgccgcccccgttgccaaggggacgcccgccgccccccttgcc
caggcgacgcccgccccccttgcccaggcgactcccgccccccttgcccaggcgacgccc
gccccccttgcccaggcgactcccgccccccttgcccaggcgacgcccgccccctttgcc
caggcgacccatgtcctagctgagactgctactactacagaggtaacggcgctccgcgtg
gaagacgagatggactctccaccaccacagagcaacaccccagccggggagagttctatg
caagctgctgtttctgtgccgaagaaaaagaggaagatgaaggatctgaacaagaaggag
gctgttggagacctcctggatgcctttaaggaggagcaggtagtggagagccctcctgag
ccagagcaggccacacccacttctgcctctgacgccgaggagccccgcccagccgccacc
cctgcagtcgaagaggtggatgagacgtgggaggagaaggaggacaaactagatgcagag
aatatcgaacccaagcccggggatctgaagtaccagtacaaagaggaactatgtaggcct
atagacccagaggagaagaagaggtatgacagggacttcctgctgggcttccagttcatc
agtgtcgccatgtccaagcctgagggcctgcctcagatcagtgatgttgtgctggacaag
gcgaataaggcccctctccgccagttggaccccagccgtttgccagggatgaacatgggc
accgacttcacaccctcgtttgccaacctgggcaggcctggaatgggaggtggaggaggt
ggaggtggtggtggtggtggtggtggagggggtggccacagaggaggaccaccctctggt
atgggtggtggaggaccgcgtcgctcccagcagggccagcgtaaggagcccaggaggatc
atcaacatctcttcctctctgacggacgacgtgaagctcaacaaggctgagaaggcctgg
aagcccgctgtcaagaaggctgccagtgggcgagctgctcctgaggaggagctcgacgac
ccagaagaggccaagaccaaggagctgttcaagagggtccgtagtatcctgaacaagctg
acccctcagatgttccaacagctgatgaagcaggtcacagagctgaccatcgatacggag
gagaggctgaagggagtgatagatctgatctttgagaaggccatctctgaacccaacttc
tctgtggcctacgccaacatgtgccgctgccttattgggctcaaagtccccactacagac
aagccaggagtcactgtgaattttcgcaagctgcttctgaaccgctgtcagaaggagttt
gagaaggacaaggacgatgatgtcatctttgaggagaagcagaaagagctggatgctgca
gccacggaggagaaggatcgcctgaaggcggagctggaggaggccaaagacaaggcgcgg
cggcggtcgctaggcaacatcaagttcattggtgagctgttcaagctgaagatgctgact
gaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgatgaggagtcgcta
gagtgcctctgtagactcttgtccactatagggaaggacctggactttgagaaggcaaag
cctcgtatggaccagtactttacccagatggacaagatcatcaaggagaagaagacatcg
tccagaatccgcttcatgctgcaggacgtactggacctcaggaggaacacatgggtcccc
aggagaggagagcagggccccaagaccatagaccagattcacaaggaggctgagctggag
gagcacagggaggttctcaaggtgcagcagcaactcctcaaccagaacacccgaggagga
ggtggaggacgtggtggtggtggtggaggaggaggaggaggaggaggaagagatcagggg
agccgtgggggccaacacccccaggcgggccaaaggagtcagccccaggacgaaggctgg
aacacagttcccatttccaccaaaagcagacccatcgacaccagccgactcagcaagatc
actaagcccggggctttggactttaacaaccagctgctggcgccccagcttgggggtaag
ggcatgtggggcagctggggcaagggcagcagtggaggcaccaccggagccaaacccgct
ggggaagtcaccccagagtcaggaggccgcccagccaccagcaccctcaacaggttctca
gccctgcagccacagcagccctcctcctcagggccctcacatgactcggacagaagagtt
cctcataggaacagctctagccgggaccgtggcagcgacagattcgagcgtcatgaccgt
ggcagcaacgaccgctttgaccggagggacgaccgggacaggaaccggcccccggtcacc
aagcggagctttagcagggagtcggaggagcacggcagagagagggagcacagcggccct
gctgatcctgtacgccgcgttgccagcatgaccgacgaccggggcagcagagaccgagcc
aggagcaaagagaatgtgaagagggaagctgctccaaccccccctcctccccagaccaaa
cctgccttgagtgaagaagagctggaaaagaagtccacagctatcatagaggagtaccta
cacatcaacgacatgaaggaggcgctgcagtgtgtagtggagatgaacagcaccccgctg
ctctttgtgtttgtacgaagcggtctggagtccactctggagcgcagccccatcgccaga
gaacgcatgggcctgctgctgcaccagctgtacaaggcaggcaccctccccaaagagcag
tactacagagggcttcaggagatactggaggtggcggaggacatggtcatagacatcccc
cacatctggctctacctggctgagctcatcacccctatgctccacgaaggaggcatcccc
atgggacagctcttcaaggagatatccaagcccctggttcctcaggggacggctggagtt
ctacttgtccagatcctcaccctactctgcaaaggaatgagccataaaaaggcaggcacc
atgtggagggaggcggggcttagctggaaagactttctgcctgaggacgaggacgccaac
aagtttgtgacagaagagaatgtggagttcaccctgggaggaggacgaggagatgatgat
gacgatgatgatgagacagagaagagcagtaagaaggagctgagctcagaggagctgacc
aaacagctggacagactcatacaggacaaggctgaaaaccagaggatctacgattgggtc
gaggctaacctggacaagacgcagatgtcctccaacgtgtttgtcagagcagtcatgaca
gccatctgccagtcggccatcatctgtgagaacccttacaagttggatgcgagggtgatc
acccggagggccaagctgctccacaagtacctgaaggatgagcagaaggagctgcaggct
ctctacgctctgcaggccctcatggtggagatggagcaacctgccaacctgctgcggatg
ttctttgacacgctgtacgacgaggacgtgatcaaagaggaggccttctacaagtgggag
tccagcaaggaccccactgagatgcagggcaagggtgtggccctgaagtccgtcaccgcc
ttcttcacctggctccgtgaggcagaggacgaggagtctgacaacagctag
DBGET
integrated database retrieval system
