Coregonus clupeaformis (lake whitefish): 121568624
Help
Entry
121568624 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121568624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121568624
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
121568624
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121568624
HMT complexes
COMPASS/SET1 complex
121568624
COMPASS/SET1 complex (yeast)
121568624
BRITE hierarchy
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
121568624
NCBI-ProteinID:
XP_045067076
LinkDB
All DBs
Position
35:complement(10282962..10299390)
Genome browser
AA seq
2227 aa
AA seq
DB search
MLSKHNYLACDVVIVLTAAPGWSEFTVCQSYSMDPDSEPDTQRALSLQWKSYKLVQDPAI
RRVNNKIYRYDGVHFSVPDSGFPPVGDLRDPRPRRIWSRHTEMALPVPKFKLDEFYVGPI
PLKEVTFARLNDNIKEPFLAEMCAKFGEVEEMEILFHPKTRKHLGLARVLFTSTRGAKDT
VKHLHNTSVMGNIIHAQLDIKGQQRQKYYDLIVSGSYTPQTVPTGGKALTERFQPPAPTQ
PDTSSDIRRRLSSEIAGLAVGLAAGVPALTPGSTTPCSVDTGFSEQRLDTTPSSMGGPYT
PGSSASSQGGGTPYTPRSVSQDSGYAVARQVGYSAGPLTSGYPSQDTLPSSSSSAVSSVG
AYKAPRYPEDPHAPPQDPYQRCRPTYPPTGPFRPNEPPLYPTYPNAGGAGQHMAHHPAMP
PPPPAPQYEQPPLADRDRERDRDSGARYGAGGIGSRRSSYQEAKYSHHSHHSERERGYRR
DSLGSREHGRHRNHHSHNHSSSSSSSRRRSSHDRDSRERDRDSDYSNSSDPRFNANSHRS
SSNSLSPPPSAYPSYSSSSKDQPPPHVSSRLEPSSVYRAQSSGAGSGERGSGSDNKDPRS
HHTPLPPPPPPPLPPASVIAAAVAETLSALDFGQESPVREETWTKPKRRPTTPPPPPQHP
SSPSSTSLPHHLPSSTSLSPPPQRDSSSPEPDSTNESLPFVYHSSSLDSRIEMLLKEQKA
KFSFLASDEDEEEDRKEERQREKAAAGEGGAAGEGGAAAGEGGAAAGEGRSNKQREQDGE
KDRRRRQGGDGGGQQRRKGERDRDGRRGRKQRTGGEGRKSPTVVAPATPSSATFSPRIPT
TDDHTSLHGTGPLQEETSQPESIDPRTRQGAHTPPYNGQSQSSPHSSGEDMEISDEDEEH
TITAVTTHHATPSSISSPSSSQAPLPSQTDPSASPSDPTQHFGTSMPAPPIPSYPTHLPP
PGFSLQPPPPPCIPPPLAHMELHPEYPPPMPPHMYDYASSMELMNQYSGGAPMSFQMQTQ
MLSRLHQLRMSSSNGTAAPGDAPLQTTTTMPPPPHPHHPYMDQEGGGYDQDHHYMPPHMP
YAYPGPSQMPHHAIPPPHTGWPPHVLPEHYTYHTPPPYGTMPPVEGEAQYGAEGDPQMPL
LTENPHEATVQLVLATLIQEMKSIMQRDLNRKMVENIAFGTFDEWWERKETKAKPFQTMV
RGVAAVRDEDKKEENKVSSKPREPLMSLVDWAKSGGMEGFSLRGALRLPSFKVKRKEPQE
LAEVGEMKRPKTPPEDDDEDSYHEKGLEVGMADGEGHRAERDSRRRKKKTRSRKPWDLDS
EGEETSDGSSSDKEDEESDKESEDEALSADSDDESLSSSTESSSSSTSSSSEDEDEEEGE
QAGSGLDTMDESTMDSTVLDTEKEDDREKSAAAVPKAPLSTEIKAEIAASKKDSSTPSSN
ARPPAPRPSSPIVIVPPLKKRRKTVSFSTGESDYKPHLPTVPLSPPPSTASPLFSPIKSH
LPDSILIVSTPGTTPSKTLSLLPFASKPGEGHTLSPSPVLTVPSPVCPEDFKKSPVPLVS
PPITPTKSPNKRGASPKSPTPAPVWVCRTVQNLPLDHASMVKMAFEEAPPPVTKGRGRGR
PRTVSLSTPTPPPSYHTLREEDEEEERLQRLRLREQLGASSLIQLGSAPTADLSVLADVA
LKLDPDAGDSEETETSDEAEEQKMEEEMLLSPKALPLVMDPQGLSALQEHNYSKAPFHLI
PAQKRNVSKQEPGVLLPADLNHQAISGVLEAPEEVIGEPLPSRDRHQAEYLSGMGLLCEA
GNTAKATVLAPLTPSAKRKGMVARGRELEEMGKGKNKKRRRKDKENLELQQTKKQKEHQT
KKQKKRKLEEVDLEEDVDVEQLEPGELSNTEDEEEEEWDDVRKSERLFLQEAGLTSSQRW
PKPIPAPEAVTFDQRSEFEQMTILYDIWNSGLDVEDMTLLKTTYEKLLQDDHSTDWLNDT
HWVHHTVTNIPNPRRKKKSADGQLREHATGCARSEGYYAISRKEKDVYLDLELPEQALLE
AADYDASGSNRLLSERRSEQRRLLSAIGIPAVMDSDLLKLNQLKFRKKKLRFGRSRIHEW
GLFTMEPIAADEMVIEYVGQNIRQMVADNREKRYAQQGIGSSYLFRVDHDTIIDATKLGN
LARFINHCCTPNCYAKVITIESQKKIVIYSKQAIGMNEEITYDYKFPLEENKIPCLCGTE
NCRGTLN
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgctatctaaacacaactatctagcgtgtgacgttgtcattgttttgacagcagcacca
ggctggagcgagtttacagtatgccagagttatagcatggatccagacagtgagccggat
acacaacgagctctcagtttgcaatggaagagctataagctcgtccaagacccagccatc
cggagggttaacaacaaaatatatcgatatgatggggtacatttcagtgtgccggactcg
gggttccccccagtgggagatttgcgggaccctcgacctcgtaggatctggtccaggcac
acagagatggccctgccagtgcctaagttcaagctagatgagttctacgtgggccccatt
cccctcaaggaggtgaccttcgctcgcctcaatgacaacatcaaggaacccttcctggcc
gagatgtgcgccaagtttggagaggtggaggagatggagatattgtttcaccccaagacc
cgtaagcacctgggcctggcccgcgtgctcttcaccagcaccaggggggccaaggacacg
gtcaaacacctgcacaacacctccgtcatgggcaacatcattcacgctcagctggacatc
aaaggccagcagaggcagaagtattatgacctgatagtgagcggatcctacacaccccag
actgtacccacaggaggcaaggccctgacagagcggttccagcccccagctcccacacaa
ccagacacgtcgtcagatatcaggcggagactgtcctctgagatagctggcctggctgtg
ggcttggctgcaggggtgccggctctcactcctgggagcaccaccccctgctctgtggac
acgggcttcagtgagcagcgtctagacacgaccccctcctccatgggcgggccctacacc
ccaggctcctccgcttcctcgcagggaggaggaacgccctacacccctcgctctgtctca
caggactcgggctacgctgttgccagacaagttggatacagtgctggcccattgaccagt
ggctacccttcccaggacacgcttccctcctcctcctcctctgctgtctcctcagtcggg
gcatacaaagctccccgctacccggaggacccccatgcacctccgcaagacccctaccaa
aggtgtcgccccacgtacccccccaccggcccgttccgtcctaacgagcccccgctctac
cccacataccctaacgctggaggggctggacagcacatggcacaccaccctgcgatgcct
cccccacctcctgcaccccagtacgagcagccccctctggcagacagggacagagagcgg
gacagagactcaggagcgcggtacggtgccggtggaatcggctctagaaggtcatcttac
caggaggccaagtattcccaccactcacatcactctgagagggagaggggctacagacgg
gacagcctgggctccagagaacacggcagacaccgtaaccaccattcacacaatcacagc
agcagtagtagcagcagccgacgacggagcagccacgaccgagacagcagggagagggac
agagacagcgactactcaaacagctccgaccccagattcaacgccaactcccaccgctcc
tcctccaacagcctgtccccgcctccatccgcctacccctcttactcctcctcctccaaa
gaccaaccccctccccacgtctcctcccgcctggagccctcctcagtgtaccgtgcccag
tctagtggtgctggttctggggagagggggtctgggtctgacaacaaggacccccgatcc
caccacacccctctgccgccccctccacctcctcccctcccccctgcctctgtgatagcg
gcggctgtagccgagacgctcagcgcccttgactttggccaggagagcccagtcagagag
gagacgtggaccaagcccaaacgccggcccaccaccccacctccccctcctcagcatccc
tcctcaccctcctccacctccctccctcaccatctcccctcctccacctccctctcccca
cccccccagcgagactcctcctccccggagccagattccaccaatgagagcctgccattt
gtctaccacagcagcagcttagactctcgtattgagatgctcttgaaggagcagaaagca
aagttctccttcctggcctccgatgaagatgaggaggaggacaggaaggaagaaaggcag
agagagaaggcagcagcaggggagggaggagcagcaggggagggaggagcagcagcaggg
gagggaggagcagcagcaggggagggcaggagcaataagcagagggagcaggatggggag
aaagacaggcggaggagacaaggaggagatggtggaggccagcagaggaggaaaggagag
agagatagagacggccgcagagggaggaagcagagaacagggggagaggggaggaagagt
cccactgtagttgcaccagctaccccctcctccgccaccttctctccccgcatccccact
acagatgaccatactagtctccatggaacaggacctctgcaggaggagacatcccaacct
gagtctattgatccaaggaccagacaaggggcacacacacccccctacaacggacagagt
cagtcatcccctcattcctctggggaggacatggagatctcagacgaggatgaggaacac
accattacagcagtgaccacccaccacgccactccttcctccatctcttccccgtcttca
tcccaggcccccctgccctcccagacagacccctctgcctccccctctgaccccacacag
cactttggcacgtccatgcctgctccacccatcccctcttaccccactcacctccctccc
ccgggcttttccctgcagccccctccacccccctgcatccccccaccgctggcccacatg
gagctgcaccctgagtaccctccgcccatgcccccacacatgtatgactatgccagcagt
atggagctgatgaaccagtacagtggcggagcccccatgtcctttcagatgcagacccag
atgctgagtcggctgcaccagctgaggatgtcctcctctaatggcaccgctgcccccggt
gacgccccccttcagactactaccactatgccccctcccccacacccccaccacccttac
atggaccaagaggggggtggctacgaccaggaccaccactacatgcccccccacatgccc
tacgcctaccctggcccctctcagatgccccaccacgccatcccccctccacacaccggc
tggcccccgcatgtcttacccgaacactacacgtaccacaccccgccgccctatgggact
atgcctcctgtggagggagaggcccagtacggggcggagggggacccccaaatgcccctg
ctaacagagaacccccacgaggccacagtgcagctggtgctggccaccctcatccaggag
atgaagagcatcatgcagagggacctcaaccgcaagatggtggagaacatcgccttcgga
accttcgacgagtggtgggagcgcaaggagaccaaagcaaagccgttccagaccatggtt
cggggtgtggctgcagtgagggacgaggacaagaaggaggagaacaaggtcagcagcaag
ccccgggagcccctcatgtctctggtggactgggccaagagtggaggaatggaaggcttc
tcactgagaggggcgctacgactaccctcattcaaggtgaagaggaaagaacctcaggag
ctagcagaggtaggagagatgaagagacccaagacaccgccagaggatgatgacgaagac
tcgtaccatgagaagggtctagaggtaggaatggcagatggggagggccacagggctgag
agggacagcaggcggaggaagaagaagaccagaagtcggaaaccttgggacctggacagt
gaaggagaggagacttctgatggttcttcttcagataaggaggatgaggaaagtgacaag
gagtctgaagatgaggccttgagtgctgacagcgatgatgagagcctctcctcatccaca
gagagttcttcctcctcaacatcatcctcctctgaagacgaggatgaggaggaaggagag
caggccgggagtggactggacaccatggatgagtctacgatggacagcacagttctggac
acagagaaggaggatgaccgagaaaagtctgcagctgctgttccaaaggcaccgctcagc
acggagatcaaagcagaaattgctgccagcaagaaggattcatcaacacccagctcaaac
gctcgtcctccagccccccgcccctcctcccccattgtcattgttcctcctctcaagaag
cgacggaagaccgtctcgttctctaccggggagagcgactacaaaccccacctgccaacg
gtccccttgtccccacctccctccactgcctctcctctcttctcccccatcaagtctcac
cttccagactccatcctcatcgtctccacacctggaaccaccccctccaagactctctca
ctcctcccctttgcctccaaaccaggcgaaggccacaccctctctccctcccctgttctc
actgttccctcgcctgtatgccctgaagacttcaaaaagagccctgtccctctggtgtcc
cccccaatcacccccaccaagtcccccaacaaacggggggcctctcccaaatcccccacc
cctgctccagtgtgggtgtgtcgcactgtgcagaacctccccctggaccacgcctccatg
gtcaagatggccttcgaggaggccccgccccccgtcacaaagggccggggcaggggacgc
cccaggactgtcagcctgtcgacccccacccctcccccctcctaccacaccctcagagag
gaggatgaggaggaggagagactgcagaggctgagactcagggagcagctgggagcatcc
agcctgatacagctgggctcggcccccacggctgacctgtctgtcctggctgatgtggcc
ctgaagctggacccagacgctggagactcggaggagacggagacatcagacgaggcagag
gagcagaagatggaggaggagatgctcctctctccaaaagccctccccctggttatggac
ccacagggcctgtctgccctgcaggagcacaactattccaaagcccccttccacctcatc
cccgcccaaaagaggaatgtctccaaacaggagccaggggtgctcctccctgcagaccta
aaccatcaagccatctctggggtgctggaggcacctgaggaggtcataggggaacccctg
ccctctagggacagacaccaggctgagtatctgtctggcatggggctgctgtgtgaggct
ggcaacacggccaaggccactgtgctggcacctctcaccccatcagccaagaggaaggga
atggtagcgagggggcgcgaattggaggagatgggcaaagggaagaacaagaagaggagg
aggaaagacaaggaaaacctggagttgcagcaaacgaaaaaacagaaggaacatcagacc
aagaaacagaagaagaggaaactagaggaggtggacctggaggaggatgtggacgtggag
cagctggagccgggtgagctgtctaacacggaggacgaggaagaggaagagtgggacgat
gtgaggaagagcgagcgcctcttcctccaggaggccggtctgacgtcgtcgcagcgttgg
cccaagcccatcccagccccggaggccgtcacatttgaccagcgcagcgagtttgagcag
atgaccatcctgtacgacatctggaactctggtctagacgtggaggacatgactctgctg
aagaccacctacgagaagctgctgcaggacgaccacagcactgactggctcaacgacaca
cactgggtccaccacactgttaccaacatccccaacccgcggcgtaagaagaagagtgca
gacgggcagctgcgggagcacgcgacgggctgtgccaggagcgagggctactacgccatc
agcaggaaggagaaggatgtctacctggatctggaactgcctgagcaggccctactggag
gctgccgactacgatgcctcgggctcaaacaggctgctgtcagagagacggtcggagcag
cgccgcctcctcagtgccataggcatccctgcagtcatggactctgacctgctcaaactc
aaccagctcaagttccgtaagaagaagcttagatttggccgcagtaggatccatgaatgg
ggcctgttcaccatggaacccattgctgctgacgagatggtcattgagtatgtgggccag
aacatcagacagatggtggctgacaacagagagaagcgttatgcccagcagggcatcggg
agcagctacctgttcagagtggaccacgacaccatcatcgatgccaccaagttaggcaac
ctggcacgcttcatcaaccactgctgcactcctaactgctacgcaaaggtgatcaccata
gaatcccagaagaagattgtgatctactccaagcaggccattggcatgaatgaagagatt
acctacgactacaagttccctctagaggaaaataagattccctgtctgtgtggaacagag
aactgccgtgggacgctcaactag
DBGET
integrated database retrieval system
