Coregonus clupeaformis (lake whitefish): 121570285
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Entry
121570285 CDS
T08357
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121570285
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Others
Others
121570285
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121570285
BRITE hierarchy
Motif
Pfam:
Cast
RBD-FIP
Crescentin
Tropomyosin
TMF_DNA_bd
TMF_TATA_bd
DUF5798
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
121570285
NCBI-ProteinID:
XP_045078115
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All DBs
Position
8:complement(66631787..67009724)
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AA seq
940 aa
AA seq
DB search
MNTSSFCTLDLIPHFPILSSLLSIPTLSLSLSPQHLQMTVQALQDELRIQRDLNQLFQQD
CSGGRPGEPLSYEPTEENFHMLHAEHQRQAKELFLLRKTLEEMELRIDSQKQTLGARDQS
IKKLLEMLQSKGLSAKASEEDHERTRRLAEAEMHIHHLDSLLEQKDKETNALREELHRRS
YEGAPESAKTKALQTVIEMKDSKVQSLERGLRDLEEEIQMLKSNGALSTEEREEEVKQME
VYRSHTKFMKNKVEQLKEELSQREVQGEELKQKAADLQQEVSAIDQVKQDLSRKETELMG
LRTKLETLTNQFSDSKQHIEVLKESLTAKEQRSAILQTEVDALRLRLEEKDSQLNKKSNQ
IQETSEEKGTLSREVHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMTSLKDRVKSL
QTDTSNTDTALTTLEEALAEKEHIIERLKEQRDRDDREKTEEIESNKKELKELREKLSLL
QGDLSDRETNLLDLKEHASSLASSGLKKDSKLKSLEISLEQRKEECIKMENQLKKAQNAM
LEAQANTELSERIITLEQEVTRHREDSGKAQVEVDRLLEILREMENEKNDKDKKINELEN
FASRQMKDQTKKVANLKHKEQVEKSKNVQLMEEVRKREDNLNESSQQVKVREDSLRQKED
RIEELEEALRESVQITAEREMVLAQEEAARTHTEKQMEELLAAMEKVKLELESMQAKLSS
TQQSLAEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQD
EVAMLKREKDSLVQQLKQQTQNRMKLMADNYEDERLKASSHSDPTNHKPSPDQIIPPLLD
LNQNRSKLKMYIGHLRDLCQERDPQILQALTPPSSYHRSQHTAWETELHNMTPEQLESEL
EVCERESAELQEYANCVLQQIADHCPDILEQVVNTLEESC
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcctccttctgtacacttgacttaattcctcactttcccatcctctcttcc
ctcctctctatccccactctctctctctctctctctcctcagcacctccagatgacggtg
caggccctgcaggatgagttgaggatccagagagatctgaaccagttgttccagcaggac
tgtagtggagggagacctggagaacctctgtcatatgaacccactgaggagaacttccac
atgctccacgctgaacaccaacgacaggccaaagagttgttcctcctgaggaagaccctg
gaggagatggagttgaggatagacagtcagaaacagaccctgggggccagagaccagtct
atcaagaaactactggagatgctgcagagcaaaggtctgtcagccaaggcctcagaggag
gaccatgagaggaccaggagactggctgaggctgagatgcacatccaccacctagacagt
ctactggaacagaaagacaaggagaccaacgccctacgagaggagctgcaccgacggagc
tatgaaggagcccctgaatcagccaagaccaaggccctgcagaccgtcatcgagatgaag
gactctaaggtccagtctctggagcgtggtctgagggacctggaggaggagattcagatg
ttgaagtctaacggggctctgagtactgaggagagagaggaggaggtgaaacagatggag
gtctacagatcacacaccaagttcatgaagaacaaggtagagcagctgaaggaggagcta
tctcagagagaggtccagggggaggagcttaagcagaaggctgccgacctgcagcaggag
gtgtctgcaattgaccaggtaaagcaggacctcagcaggaaggagacagagctgatgggg
ttaaggaccaagctggagactctaaccaaccagttctcagacagcaaacagcacatcgag
gtcctcaaggagtcactgaccgccaaggaacagcgctctgctattctacagacagaggtg
gatgctctgcgtctgcgtctggaagagaaagattcccagctgaataagaagtctaaccag
atccaggagacgtctgaggagaaggggacgctcagcagagaggtacacgacctcaaggac
atgctggaggtcaaggagcgcaaggtcaacgtcctgcagaagaagattgagaacctgcag
gagcagctgagagacaaggagaaacagatgactagtttgaaggacagagtcaagtctctc
cagacagacacctccaacacggacacagctctcaccaccctggaggaagcactggctgag
aaggagcatatcattgagcgtctgaaggagcagagagacagagacgacagagagaagaca
gaagagatcgagtccaacaagaaagaactgaaggagctcagagagaaactcagtctattg
cagggagacctgtctgaccgagagaccaacctgctagacctaaaggagcatgcgtcgtcc
ctggcctcctctggtctgaagaaggattctaaactgaagagtctggagatctctctggag
cagaggaaagaggagtgcatcaagatggagaaccagctcaagaaggcccagaatgccatg
ctggaggcccaggccaacacggagctgtcagaacgcatcatcactctggaacaggaagtg
actcggcacagagaggattctggaaaggcccaggtggaggtggaccggctgctggagatc
ctccgagagatggagaacgagaagaatgacaaggacaagaagatcaatgaactggagaat
ttcgcctcaaggcagatgaaggaccagactaagaaggtggccaacctgaaacataaggag
caggtggagaagagtaagaatgtccagctgatggaggaggttaggaagagagaggacaac
ctcaatgagagctctcagcaggtcaaggtgagagaggactcccttcgccagaaggaggac
cgcatagaggagctggaggaggctctgagagagagtgtccagatcacagcagagagagag
atggtgctggctcaggaggaagctgcccgcacacacactgagaaacagatggaggagctg
cttgcggccatggagaaggtcaaactggagctggagtccatgcaggccaagctgtcctct
acccagcagtcattggctgagaaggaggcccacctgaccacactgagggcagaacgtagg
aaacacctggaggaggtgctggagatgaaacaggaggcgctgttagcagccatcagtgag
aaggatgccaacatcgccctgctggagctgtcctcgtccaagaagaagaaaacacaggac
gaggtggccatgctgaagagagagaaggacagcctggtacagcagctcaaacaacagacc
cagaaccgtatgaagctgatggctgacaactacgaggatgaacgtctgaaggcctcctca
cattctgacccgaccaaccacaaaccctccccagaccagatcattccccctctcctggac
ctgaaccagaaccgcagtaagctgaagatgtatatcggccacctgagagacctgtgtcag
gagagagacccccagatcctgcaggccctgacccctccctcctcctaccaccgctctcaa
cacaccgcctgggagacagagctacacaatatgaccccagagcagttggagtcggagctg
gaggtctgtgagagggagagtgcagagctccaggagtatgctaactgtgtcctgcagcag
atcgctgaccactgccctgacatcctggaacaggtggtcaataccctggaagagtcctgc
tga
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