Coregonus clupeaformis (lake whitefish): 121571677
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Entry
121571677 CDS
T08357
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410
Base excision repair
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121571677
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121571677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121571677
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571677
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121571677
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
121571677
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121571677
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121571677
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121571677
BRITE hierarchy
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
BRCT
CobT_C
Motif
Other DBs
NCBI-GeneID:
121571677
NCBI-ProteinID:
XP_041739213
LinkDB
All DBs
Position
40:complement(22031417..22054719)
Genome browser
AA seq
2186 aa
AA seq
DB search
MALFDNCVVVLELKNLPYKEKMRLKLAITENGGSISYVINKQCTLIVTSSVSSLSSSRVR
SMKKHQTPVVGVEYVSRCLEKGVLLPVEDYCLPPPTSPSLFPPRPASPLPSQSVLKVTSQ
PVAEQKSEVQAKKVGNQKRTGTYLSKFRVYTESDNDLPTYPTIFLVAKYSIFEKANSSTW
SVLELQSSSGEGGQQQYRVVRYWREDHGAKSAAVQDKQVFLSVSEEAVEVYQTLRKELQV
RGLTLRTTLPPEAPDLGSASLQQLLLEEKLSCSSLSQEVGVFVELLWAEALGCLDNVLKV
PITSLSLNDVSRAEGLLLQVQRRLRERQGEGPDPEVASLMEEVYTLLPHKTDLSHLPLHT
KLISSRLDLCQLIRDVLNVSEATLRSPFPSCLGKYRALRCSIERVPAGPEFLYVTELLQD
RQVQILQVLRVNRGVELQMFREELGNVKPLLHSSSPSSFVGILSRGLLLPRVGVEHHGIE
RTDIGNLGGGIYFSDSMSTSLKFSKPSVTDGCRLLLVCDVALGRCTDLPKRDSSLTHAPE
GYHSVHGVRRNPNTPSEFEDDEYVVYSPEQVRLQYVVQFRLEEDQLKDFQPTIDTSSTEL
PLPVSLSDLLSRDEAEEDVGSCKNPLEEMTAGLLDCSGQPLPLQAVHVRARLMDLLSQVI
IFQTYTNQSTAPIEAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKQQARKEYKQAIERG
HGAYLMDQDAPDVFTISVGNLPAGATVLIKVTFVTELVVMEGLINFSLPGSVAPWQQSSA
LNQRTQVTLEKVCVTSLDSQGQFSLDMSIEMPNEIINLHCLTHKVKIKRTDCKAVVRTCP
GETLGPDGFLLCFSLAQIHLPRMWVEKHPDKDSQACMLVFYPDFEPSPSSSPMSTSSEVI
LLLDSSESMRGEALQNARRIALQLLNTLDHHSVRVNVISFGSDQKEAFLSANPLVEALQP
AKEFIMSSPPVGGSTELWRPLRSLSLLPPSRGVRNLLLLSDGHIQNQTLTLQLVRQHVQH
SRLFTCGLSPTANRHMLRALAQAGGGAYEFFDTKIKHTWREKMACQVKRMVSPGCSSVSV
KWQQFNPSAPPPVQAPSQLHALFTDCHTLVYGFVPHCTQATLLGNLSGQNIETMVSTTEL
QKTRGTFLHKLTARAVIRDYEDGSLHTNEAEHEGKKSVMKSFIIELSKEFSILSQFTSFV
AIEERDSEQPDVGFTDVPKLISDEDVDFLPYLRWQEEEYEGDGMDSGSDSMSNSKDDWPV
RVFCKNICQERGVEEELEELGSMVQLQVDDEPWKGSVNRNLRTKFLSQSATDEVSLGRRH
DSCQFKSSVVSARPVIASAATEPPDMTEGVVMERIMMDEEMECYDDMDFGLQDSEDPLGG
SVFMHALSPSYSPTSPTRHTIQPYIRTSFVSSINAYAASKQLDMTVETTVETALTPELSE
TFQSLPERVRSAKGGGAGFGRAVFGRVGGHRKVCADPAFDPVEPQIKSLSVADALRPPPS
VPRPQRRSLLVADALPPPSVPHPQPISLLVADALPPPSVPHPQRKSLLVADALPPPSVPH
PQRKSLLVADALPPPPSVPHPQRKSLLVADALPPPPSVPHPQPKSLLVADALPPPSVPHP
QRKSLLVADALPPPPSVPHPQPKSLLVADALPPPSVPHPQRKSLLVADALPPPPSVPHPQ
PKSLLVADALPPPPSVPHPQRKSLLVADALPPPPSVPHPQRKSLLVADALPPPPPVPHPQ
PKSLLVADALPPPPPASVLCSPGPPPSRLQSLSAAVSDSLPPPSALVSNEYHAIRYQMGV
HPRPGVGAVSQVLKARFPISKLHGSLHGATASTSSVPGLMPPGGLFGVSSAGAAISVGGK
WPPPSLSLAPSAKLHFGAATAGGPPQGSLFGSPSTSSMTTGLAAPGVSFGSLAGMKAIPP
LPPPGGSAPPTGFSFRASPTGGPPQGSGISLLPTTNGAHLTRPLGALHGSTRSSSEATGP
PGSSLFGSSLSTLQQHHVLPQAQKHRGVKKKGLRRGSLEFTENTLDVVKWTEIFALQHSE
GYWECSASLGSLLCVDVDYFANVFLKKKGISSLGVRAHADILRLVASLLVLQLMRVRRLE
EGKLLLSLFRLDLDHSPPQPRCERWEAVRRAVDWVCWADREYPCVCSRLEFGWDWESSTR
QLLGIDPPHPLSPLILLRTRGGVRAQ
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtttgacaactgtgttgtggttttggagctgaagaatttgccttataaggag
aagatgaggctgaagctggcaataacagagaatgggggcagcatttcctatgtgatcaat
aagcagtgtactctcatagtgacgagcagtgtgtccagtctgagctccagtcgggtgcgg
agcatgaagaagcaccagactccagtagtaggggtggagtatgtgtcccgctgcctggag
aagggagtcctgctgcctgtagaggactactgcctgcccccccctacctctccctctctt
ttcccacccaggcctgcctctcccttgccctctcagtcagtgttgaaggtgacgagccag
ccggttgcagaacagaagtctgaagttcaagccaagaaggtggggaatcagaagagaact
ggaacttacctgagtaaattcagagtgtatactgaaagtgacaatgatcttccaacatat
ccaacaattttccttgtggccaaatactcaatttttgaaaaggctaacagcagcacatgg
tcggtgttggagctgcagagtagcagcggagagggggggcagcagcagtaccgtgtggtg
aggtactggagagaggaccatggtgctaagtcagcagctgtgcaggacaagcaggtgttc
ctctctgtgtcagaggaggctgtggaggtctaccagactctcaggaaggagctgcaggtc
agaggactcacactgaggaccaccctccctccagaggctccggacctgggctctgccagc
ctgcagcagctgctgctggaggagaagctgagctgcagcagcctatcacaggaagtgggc
gtgttcgtggagctgctgtgggcagaggcccttggttgtctggacaatgtcctcaaggtt
ccaatcaccagcctcagtctcaacgatgtgagcagggctgaggggctgctgctacaggtc
cagaggaggctgagggagagacagggggaggggccagaccctgaggtggcctctctgatg
gaggaggtctacaccctccttccacacaaaactgatctgtcccaccttcctctccacact
aaactcatctcatcgcgactggacctctgccagttgatcagagacgtgctgaatgtgagc
gaggccacactgagaagccccttcccttcctgtctggggaagtaccgcgccctaaggtgc
agcattgaaagagttcccgctggtcctgagtttctgtatgtcaccgaacttctacaggac
agacaggtgcagattttacaggtgctgagagtaaacagaggggtggagctacagatgttt
agggaggagcttgggaatgttaagcccctcctccactcctccagccccagcagctttgtg
gggatcctgtctcgtggtctgttgctgcccagggttggagtggagcatcatgggattgag
agaacagacattgggaacttgggcggtggcatctacttcagtgattctatgagtaccagt
ttgaagttctctaagcccagtgtgacggacggctgtcggctgctgctggtgtgtgacgtg
gcattggggcgctgtacggacctcccgaagagggacagcagcctgactcatgcccctgag
gggtaccacagcgtacatggggttcgccgcaaccccaacacaccctctgagtttgaggat
gatgagtacgtggtgtacagcccggagcaggtgaggctgcagtatgtggtacagttcaga
ctggaggaggaccagctgaaggacttccagcccaccatagatacttcctctaccgagctg
ccacttcctgtctctctgtctgacctcttgtcccgtgatgaggctgaggaggatgttggg
agctgtaagaaccctctggaggagatgactgcaggcctgttggactgctctggacaacca
ctccccctacaggctgttcatgtcagggccaggctgatggatctgctctcccaggtcatc
atcttccagacctacaccaatcagagcaccgcccccatcgaagccaagtacgtcttccca
ttggatgattctgctgctgtgtgtggctttgaggccttcatcaatgggaaacatgtagtg
ggacaggtgaaggagaagcagcaggcgcgtaaagagtataaacaggccatagagagaggc
catggagcttacctaatggaccaggatgcacctgatgtttttaccatcagcgttgggaac
ctgcctgccggtgccaccgtccttatcaaggttaccttcgtcaccgagctggtcgtcatg
gagggcttgatcaacttctcgttgcccggtagtgtggcaccatggcaacagagctcagcg
ctcaaccaaaggactcaggtgactttggaaaaggtgtgtgtgaccagcctggattcccaa
gggcagttcagtctggacatgtccattgagatgcccaatgagatcatcaacctgcactgt
ctcacacacaaagtcaagatcaagaggacagactgtaaggctgtggtgaggacatgtcca
ggtgagactctgggtccagatgggttcctgctctgcttcagtctggctcagatccacctg
cccaggatgtgggtggagaaacacccagacaaagacagccaggcctgtatgttggtgttt
tacccagactttgagcccagccccagctccagccccatgtccacctccagtgaggtgatc
ctgctgttggactcgtctgagtccatgagaggagaagctctccagaacgccaggagaatc
gccctgcagctccttaacaccctggaccaccacagcgttcgagtcaatgtcatctccttt
ggctcagaccagaaggaggcattcctctctgccaaccctctagtcgaggccctccaacca
gccaaggagttcatcatgtcctccccacctgttgggggcagcactgagctgtggaggccc
ctgcgcagcctgagtctgttgcctccgtcgcggggcgtgaggaacctgctgctactatca
gacggccacatccagaaccaaaccctgaccctgcagctggtcagacagcatgtccagcac
agccgcctcttcacctgtggcctcagcccaacagctaatcggcacatgttgcgggccctg
gcccaggcagggggaggggcctatgagttctttgacacaaagataaagcacacctggcga
gagaagatggcgtgtcaggtaaagcgtatggtgtctccaggctgcagctctgtgtctgtg
aagtggcagcagtttaacccctcagctccccctcctgtccaggccccctctcagctccac
gcactcttcactgattgccacaccctggtctatggcttcgtgccacactgtacacaggcc
actcttcttggaaacctgagtggtcagaacattgagaccatggtgtccaccactgagcta
cagaagaccaggggcacgttccttcataagctcacagcgagagccgttatcagagactat
gaggatggcagtcttcacaccaacgaggccgaacatgaggggaagaaatcggtgatgaag
tccttcatcattgagctgagcaaagagttctccatcctgtctcagttcaccagctttgtt
gccatcgaggagagggactcagagcagcctgacgtgggcttcacagatgttcccaaactc
atctcagacgaggacgtcgacttcttaccttaccttcgctggcaggaggaggaatatgag
ggagatgggatggactcgggatcagactcaatgtcaaactcgaaggatgattggccggtg
cgtgttttctgcaaaaatatctgtcaggagaggggggtggaggaggagttggaggagctt
ggatcgatggttcaactccaggtggatgacgagccatggaaaggatctgtgaataggaac
ttacgtaccaaattcctctctcagagtgctacggatgaggtgtctcttggtaggagacat
gattcctgtcaattcaagagctctgtagtctcagccaggccagtgatcgcgtctgctgct
accgaaccaccggatatgactgaaggagttgtgatggagagaatcatgatggatgaagag
atggagtgctatgatgacatggactttggtttacaggactctgaagacccccttggtggc
tcagtattcatgcatgctctgtccccttcttactccccaacctctccaactcgccacaca
attcaaccctatataagaacgtcattcgtttcgtcaatcaacgcatacgctgcttccaaa
cagctggatatgactgtggagacaactgtggagacggcgttaacccctgagctgtctgag
accttccagtctctcccagagagagtgaggtcggcaaagggtggaggggcaggctttgga
cgtgctgtctttggacgggtgggtggacacaggaaggtttgtgccgatccggcctttgac
ccagtagagccccagattaagtctctctctgttgctgatgctcttcgtcctcctccctct
gttcctcgtcctcagcgcaggtctctccttgttgctgatgctcttcctcctccctctgtt
cctcatcctcagcccatttctctccttgttgctgatgctcttcctcctccctctgttcct
catcctcagcgcaagtctctccttgttgctgatgctcttcctcctccctctgttcctcat
cctcagcgcaagtctctccttgttgctgatgctcttcctcctcctccctctgttcctcat
cctcagcgcaagtctctccttgttgctgatgctcttcctcctcctccctctgttcctcat
cctcagcccaagtctctccttgttgctgatgctcttcctcctccctctgttcctcatcct
cagcgcaagtctctccttgttgctgatgctcttcctcctcctccctctgttcctcatcct
cagcccaagtctctccttgttgctgatgctcttcctcctccctctgttcctcatcctcag
cgcaagtctctccttgttgctgatgctcttcctcctcctccctctgttcctcatcctcag
cccaagtctctccttgttgctgatgctcttcctcctcctccctctgttcctcatcctcag
cgcaagtctctccttgttgctgatgctcttcctcctcctccctctgttcctcatcctcag
cgcaagtctctccttgttgctgatgctcttcctcctcctccccctgttcctcatcctcag
cccaagtctctccttgttgctgatgctcttcctcctccaccccctgcttctgtcctctgt
tctcctggtcctcctccatctcgactacagtctctctctgccgcagtttcagattctctt
cctcctccctctgctcttgtctccaatgagtatcacgcaattagataccagatgggggtt
catcccagacctggagttggggctgtctcccaggttctcaaagcaaggtttccaatcagc
aaacttcacggctctttgcacggggccacagccagtacaagttcagttccaggtttgatg
ccgcctggtggtttatttggggtttcttcagcaggagcagccatttctgttggtggaaag
tggcctccaccttcccttagccttgcaccatcagcaaagttacattttggggctgcaact
gcaggcggaccacctcaaggctcgctgtttggctccccttcaaccagttctatgactaca
ggtttagcagcccctggtgtctcatttggatctcttgcgggaatgaaggccatcccccca
ctccctcctcctggaggctcagccccaccaacggggttcagttttagggcatcacctact
ggcggaccacctcaaggctctggcatctcccttttacccaccactaatggcgcccatctg
acccgtccgttaggggccttacatggttctacaaggtccagttctgaggccacagggcca
cctggatcctctctgtttggtagctctctcagtacactacaacaacatcatgtactacca
caagcacaaaaacatcgcggcgtaaagaaaaaaggactaaggaggggtagtcttgaattc
acagagaatactcttgatgtagtaaaatggacagagatttttgccctccagcactctgaa
ggttattgggagtgttctgccagcctgggttccctcctctgtgtggatgtggactacttt
gcaaacgtcttcctgaagaagaaaggcatcagctctctaggtgtgagggcccatgctgac
atcctgaggctggtggccagtctgctggtgctgcagctgatgagggtgaggaggctggag
gaggggaagctgctgctcagcctgttccgtctggacctggaccactctcctcctcagccc
aggtgtgagcgctgggaggcggtgaggagggcggtggactgggtgtgttgggcagacagg
gagtacccgtgtgtgtgcagcaggctggagtttggctgggactgggagtcgtccactcgc
cagctcctgggcatcgaccccccacaccccctctctccccttatcctcctcaggaccaga
gggggagtgagggcccaatga
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integrated database retrieval system
