KEGG   Coregonus clupeaformis (lake whitefish): 121573394
Entry
121573394         CDS       T08357                                 
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121573394
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121573394
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 121573394
NCBI-ProteinID: XP_041741267
LinkDB
Position
9:complement(16920429..17013489)
AA seq 1160 aa
MAARSSYNEERNLLRIREWERRNQGARQEKEFYQETVPLFGEPYKTIKGDELSSRIQRML
GSYEDVNNPNTHQCLDSSFSKDPQSHVTTKYGRPSHSRDRAKPPFQNPPQYGASQSGGHS
GQPLKKLQGPSSSYTQSSLGLSQGQASPDPHQRKTEPWSDLRECASLPPVLSALSPPAEP
LSPLHSSDPSDSEPQDSPLHPERHPASPLHPDYPIPMVVSPLDDPQRDIPPPAIEGTTLP
SQTFPPPLASKPNLVMPQKPTAYVRPMDGQDQVTSESPDLKPFPEDFHGQSYLEPLPDLK
STKPSLSKLKIPSQSIETPSNEADCVEDILREMTHSWPPLLTAIHTPSTVEPSKFSFPVK
EAQHVPPAFPGQKHYGSPPLAQSSTICQQSSCTVVTAHSSGVESASSSDSESSPGSESSS
ESSESGTEEAPQPLSSSSPPVPKTEGPMVTNWQLNNWIRVSQQNPSTEIQSDALLSPLPK
PQQSHDEEEAIPPRDYKSHTPPHHPEFSDGEAKPQRSEGAAHNQHVCHTSPAASHVGDSS
SISQRKTVGNKHPSRPAKAPRPEDPQAGLRVESVEVAPRDKDPSFTDRPKVKTKTGRSSK
SGGAKTDSRKPAKRGASEKRKTEQPESQGGPKVSLVLVCKRETAPSPSHAQGVDQPTPAV
VKTTSVRTETLPAPRRGQKKPRRHCPAAAHEAKRESSAKASRARQGPPRALLVKIELSLL
SRVPPQGSRPSPGGQDPATRKGPYTTPERGDTNPTAPIPTKVCKKRPAEKDVKAVPRKKP
KLQKDLKPSSSGPGSRKSETERKRSKGAPVPLQQDPGKGQGSHKRQAVDAPEPSTASAAN
RRNREAVKHKKSTGKQRTEHAKNAPKSSVAFTMPAQPTGAASSSRPLPAQPTGAALSSRP
LLQFEDRQHPVEYHMKEAKILKHKADATPDKVGKAFNYLDAAMSFVESGIAMETDPQTPK
SAYTMFAETLDLIRFILKLKGSVNPSAPATDKDFTVLCMRGLSLLQMAMFRYKREVALKY
SRTLTDHFKSSLKSAAPSPCVSKSTGTPSPMSPMPSPASTTSSGPGSNHSSGVGVGTVST
VAIPQVIQQVASSYVNITALFLSAHDIWEQADELAHKGSGLLSELDLALGPLSLASTMSS
LVRHTRQGLQWLRLDTREAQ
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggcagctcgctcaagctacaatgaagagaggaacctccttcgcatccgagagtgggag
cggaggaaccagggagcccgccaggagaaggagttctatcaggagactgtccccctgttc
ggggaaccctacaagacgatcaaaggggatgaactgtctagccgtatccagcggatgctg
ggtagttatgaagacgtgaacaaccccaacactcaccagtgtttggacagcagcttctct
aaggatcctcaatctcacgtcaccacaaagtatgggaggccatctcacagccgagaccga
gcgaagcctccattccagaaccctccacagtacggggcaagccagagcggtggccactct
ggccagcctctgaagaagctccagggtccttcctcctcctacacccagtcctccctgggt
ctcagccagggccaggccagcccagacccacaccagagaaagactgagccctggtcagac
ctgagggagtgtgccagtcttcctccggtcctctccgccctgtcccccccagccgagccc
ctatcccccctacattccagtgaccccagcgactctgagccccaggactcccccctgcac
cctgagaggcacccggcctctcccctacaccccgactaccccatccccatggtggtgtcc
cccctggatgacccccagagagacatcccacctccggccatcgaggggacaaccctgccc
tctcagaccttccctccaccacttgcctccaagcccaacctggtcatgccccagaagccc
acagcctacgtccggcccatggacggccaggaccaggtgaccagcgagtctccggacctc
aagccctttccagaagacttccatggacagtcttatcttgaacccttaccagacttgaaa
agcaccaagcccagcctttccaaactgaagataccatcacagtctatagagacgccgtca
aatgaagctgactgtgtggaggacattctgagggaaatgacccactcctggcctcctctc
ctgactgccatccacacacccagcacagttgagccctccaagttctccttcccagtcaag
gaagcacagcatgtcccacctgcatttccaggacaaaaacactatggatcacctccacta
gcccagtcctccaccatctgtcaacagagctcatgtacggttgtaacagcacattccagt
ggggtggagtcggccagctccagtgactctgagagcagcccagggtctgagtcgagcagt
gagagcagtgagagtgggacagaggaggccccacaacccctcagcagcagcagcccacct
gtgcccaagactgagggccccatggtgactaactggcagttgaataactggatccgagtg
agccagcagaaccccagcacagagatccagagtgacgctctactgagccctctacccaaa
ccgcagcagagccatgatgaggaggaggccattcctcccagggactacaaatcccacaca
cccccacaccacccagagttcagtgacggtgaagccaaacctcaacgcagtgagggcgct
gcccacaaccagcatgtctgccacacgtcgccggccgcctcgcacgttggggacagcagc
agcatcagccagagaaagactgtggggaacaaacacccctccagaccagccaaggctccc
cgccctgaagaccctcaggctgggttacgggtggagagtgtggaggtggccccccgcgac
aaagacccctcgttcacagacaggccaaaggtcaaaacgaaaaccgggcgcagcagcaag
agcggcggcgccaaaacggacagcaggaagcctgccaagcgcggcgcctctgagaagagg
aagacggaacaaccagagtcacagggtggccccaaggtgtctctggtgctggtctgtaag
agagagacggctcctagtcccagccatgcccagggggtagaccagccaaccccagctgtg
gtgaagaccaccagcgtcaggacagagaccctcccggcccctcggaggggccagaaaaag
cccaggcgccactgtccagccgcagcacacgaggccaagcgggagtcctcagccaaagct
tccagggcccgccaggggcctccacgggccctgctggtaaagatagagctgagcctgctg
tctagggttcccccccagggctccaggccttctccggggggccaggacccagccaccagg
aagggaccctacacgaccccagagaggggagacaccaaccctactgcccccatccctacc
aaagtctgcaaaaagagaccggctgagaaggatgtgaaagccgtgccaaggaagaagcca
aagctgcagaaagatctcaaaccctcctcttcaggtcctggttcccgcaagtctgagacg
gagaggaagcgttctaagggggctcctgtccctctgcagcaggaccctgggaaagggcag
gggagccacaaacggcaagcagtggatgccccagagcccagcacagcctcggcagccaac
cgcaggaacagggaggccgtcaagcacaagaagagcactggaaaacaacgcacagagcac
gccaagaatgcccccaagagcagtgttgccttcaccatgcctgcccagcccaccggggct
gcctcgtcctccagacccctgcctgcccagcccaccggggctgccctgtcctccagaccc
ctgctccagtttgaggacaggcagcacccagtggagtatcatatgaaggaagccaaaata
ctgaagcacaaagcagatgccacgccggataaggtgggcaaagctttcaactacctagat
gctgccatgtccttcgtggagagcggcatcgctatggaaaccgatccccagaccccgaag
tcggcgtatacgatgttcgctgagaccttggatctgatcaggttcatactgaaactaaaa
ggctctgtgaacccctcggcccctgctacagacaaggactttacagttttatgtatgagg
ggcctgtcccttctacagatggccatgtttcgctacaaaagagaagtagcacttaagtat
tcaaggaccctcacagatcatttcaagagttctttaaagtctgcagctccttcgccatgt
gtctcaaaaagcactggcaccccatcccccatgtctcccatgccatctcctgccagcaca
accagttctgggccgggctccaaccacagcagcggggttggggtgggcaccgtcagcacc
gtggccattccacaggtcatccagcaggtggcgtcgtcctacgtcaacatcacggcactc
ttcctgagtgctcacgacatctgggagcaggctgacgagctggcccacaaaggcagtggt
ttgctgtcagagctggacttggctctgggaccgttgagcctggcgtccaccatgagctct
ctggtgcgtcacactcggcagggactgcagtggctccgactggacacccgcgaggcacag
tga

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