Coregonus clupeaformis (lake whitefish): 121575223
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Entry
121575223 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4-like
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121575223
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121575223
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121575223
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121575223
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121575223
BRITE hierarchy
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
DUF1609
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
121575223
NCBI-ProteinID:
XP_041744119
LinkDB
All DBs
Position
10:complement(16380218..16405072)
Genome browser
AA seq
1005 aa
AA seq
DB search
MMAEGGGPESGSAADPDPEPVAAQIPTPSTESQKQSIGTLLKTTLRKGDEWFLIDSRWFK
QWKKYVGFDSWDMYNVGEHSLYPGPVDNSGLFSDHETQILKEHLIDELDYVLVPTEAWNK
LVCWYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEKEMRSLFEIPTGKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIECKNEDGT
WPRQASHPKSSTATSRNFTTSPKLSSNSSATISSTITNGDSSSNSGSTLNNSTSSGNRLG
GYNSYSSSYNYRESPSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLDDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
MDGLHEDLNRVKKKPYLALQDAGGRKDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECAKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRIDPQSRPTQYRVVVPKLGSVTDLCSA
LSRLSGIPAENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVAEEDGESMNLPVYF
RERHSKHTGGSTGTMLFGQPLLITVPRQNLAIDMLYEKVLERIGRYVTRSQSSTGEGRAS
ASASASSASCSQAAECSATSSNHNTAVSGSGSPLSDGASCSSSNSSNHSGTSNGNGVCEG
EEEAMDQQVSPEPENGQSEEEETSDLENGPKIKPCSSTPAKLFSFSMVNSYGTANISPLP
CDGNVLKLNTHSTVAIDWDSDSKKVCYDDQEAEAYEKHESMLQAPKKKATVALRECIDLF
TTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFP
VRDLNMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKADGKWHYFDDSSVSAA
SEDQIVTKAAYVLFYQRRDVGDTPTKPPPSSPLGGAKADDHMDTN
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagggaggcggacccgagtcgggtagtgcggcagaccccgatccggagccg
gtagccgctcaaataccgacaccttcaaccgaaagtcaaaagcagagtatcggaacactt
ctcaaaacaactctacgaaagggagacgaatggtttctgattgatagcaggtggtttaag
cagtggaagaagtatgtgggatttgacagttgggatatgtacaatgttggagagcacagt
ctctatcccggccctgttgacaactcaggcctgttctcagaccatgagacccagatcctg
aaggagcaccttatagatgagctggactatgtccttgtgcccactgaggcttggaacaag
cttgtctgctggtatggttgccttgagggccagcggcccatcgtcagaaaggtggttgaa
catggcatgtttgtcaagcactgtaaagtcgaggtctatctgttggagctaaacttgtgt
gagaatgacaacatggacaatgtggtcacacgtcatttcagcaaagctgacactatagac
actatagagaaggagatgcggtcgctatttgagatcccaacggggaaggagactcgactg
tggaataagtacatgagcaacacgtacgagcagctaaacaagccagacagcactgtgcag
gatgctggtctcttccaaggccaggtgctcgtgatcgaatgcaagaacgaggacggcacg
tggcccagacaagcctcccatccaaaatccagtacggccacatccagaaatttcactacc
tccccaaagctctcctccaactcgtcggcaaccatctcctcaacaataaccaatggggac
agcagcagcaactctggcagtacactgaacaacagcacctcctctggcaatagattggga
ggttacaattcatacagctcctcctacaactacagagagtcaccatcccaacctggcctc
tgtggtctcagtaacctaggcaacacctgcttcatgaactctgccctccagtgcctgagc
aacgcgtcccctctcacggaatacttcctagatgaccagtatgaggcggaaatcaaccgg
gagaatccattaggaatgaggggggagattgcagaggcctacgcagacctggtcaagcag
atgtggctcagccgcagcagctacgtggccccccgcacctttaaaacccaagtgggccgc
ttcgccccccagttttcagggtaccagcagcaggactcccaggagctgctggccttcctg
atggacgggctccacgaagacctgaaccgcgttaaaaagaagccttacctggccctgcag
gatgcagggggccggaaagacgagattgtagctaaggaagcctggactaaccatcgcctg
cgcaatgactcaataattgtggacatattccatggcctgttcaaatccactctggtgtgt
ccagagtgtgctaaggtctctgtgacctttgacccattctgctacctcacactgcctctg
cccatgaagaaggaccgcaccatggaggtgttcttggtccgtatcgatccccagtccaga
cccacgcagtaccgagtggtggtccccaagcttggctcagtgacagacctgtgcagcgcc
ttgtcgcggctctctggaatccctgctgagaatatggtggtggctgatgtttacaatcac
cggttccacaagatctacagacgagacgatggcctcaaccaaatcatggagaaggatgac
atctttgtgtatgaggtggcggaggaggatggggagagtatgaacctgcctgtgtacttc
agggagcgccactccaagcacacaggtggctccacgggcaccatgctgtttggccagccc
ctgctcatcactgtgccccggcagaacctagccattgacatgctctacgagaaggtgctg
gagaggatcgggcgctacgtgacgcgctctcagagctccactggtgaggggagggcctca
gcctccgcctctgcctcctccgccagctgcagccaggcagcagagtgctcagcaacatcc
tccaatcacaacactgcagtgagtgggagtggaagccccctgtcagacggggcatcctgc
agctccagcaacagcagcaaccactcaggaacatccaacgggaacggggtgtgtgagggt
gaggaggaggccatggatcaacaggtgagtccggagccagagaacggccagtcagaggag
gaggaaacctcagacctggagaatggccctaaaatcaaaccgtgctccagcaccccggcc
aaacttttctccttcagcatggtcaactcttatggaacggccaacatcagtccactgcct
tgcgacggaaacgtcctcaaactcaatacacattccacagtggcgatcgactgggactcg
gactcaaagaaagtgtgttacgacgatcaggaagcagaggcatatgagaagcatgagagc
atgctccaggccccgaagaagaaggccacggtggctttgagggaatgcattgacctcttc
actaccatggagacgctaggagagcacgacccatggtattgccccacctgtaagaagcac
caacaggccacaaagaagtttgacttgtggtctttgcctcgcatcctggtggtccacctg
aagcgtttttcctacaatcgctgctggagggacaagctggacacggtggtggacttccct
gtcagggacctgaacatgtctgagtttgtgtgtgacccaaaggccggaccctatgtttat
gacctcattgctgtctccaaccactatggaggaatgggaggaggccactacacagcctac
ggcaagaacaaagctgatgggaaatggcattactttgatgacagtagtgtatcggctgcc
tcggaggatcagattgtgacaaaagcagcctacgtgctattttaccaacgcagagatgtg
ggcgacacccccaccaagcctccgccctcttcccctctagggggcgctaaggccgacgat
cacatggataccaactga
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integrated database retrieval system
