Coregonus clupeaformis (lake whitefish): 121578589
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Entry
121578589 CDS
T08357
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121578589 (jmjd1cb)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121578589 (jmjd1cb)
BRITE hierarchy
Motif
Pfam:
JmjC
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
121578589
NCBI-ProteinID:
XP_045077545
LinkDB
All DBs
Position
1:complement(88736645..88883782)
Genome browser
AA seq
3044 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRTMVVMNDQVLEPQNVDPSTIQMTF
LDDVVHSLLKGENIGIQSRRRSRSSNNQNNSAHGHYTRAQANSPRPVMNSSGGAVKQGSG
VTTQQQQGQGQGGSQSQQAPAQHSPCQGQTQQQRGPRFSRRKGSDSSVPDDDTKGKEDKL
DSNERARSGDLSKSMSSKQMAVNKRRKAEEEEEKKSGLKRLKTETTVRSDFSEGSDSEMS
TKRTRTADSSSEEELKGKAGQERHKTQGSKTGKESALIGCLSPWGEELQKAESQPSSADR
EQRSSQRQGERSPLQQQQPPPLASSSLGSAPSEGQGEGIIETNSTMKAPSQTHPQSKDQY
TSVGVATRTQTPSQYVIDITAEDANAHMASQENSEAVSALLASQNPSEPSYISEPSRHLV
LNPPVSPSSPLRKSPSECNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSECNLTEPA
SFGPPSVSECNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSECNL
RNQPPRSSSVSECNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSE
CNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSECNLRNQPPSVSECRKPEIEQQHIA
GSLGSKIGFVHSVVIRPITSVSESAAVAEREKVQQQLYSSMVPCIKNASLADEARKWHKL
SPSPDVPKPLPSPEALKPKPLCSSDIIKSKTHSVLETGSKPKPLTSPEVSKHKVRYPDNP
PRSSFKPVLARGTASPGSCTKSPLIIDKKELFTVYRDPALVRPDQESNHVSYLHPQLHPH
HLTSHLLPSSHSHHLLSGVLSGLPPGPLLGGHPRLDSSGLGHLGLAQHPQPPGSLLSQTH
SHTSASYNQLGLYPIIWQYPNGTRSYPPGLNMPGSKWVHPENTVNSETNMRRNTASPWLH
HQHPVSSSDSLGLLSHVPVPVRPASADPHRSDPHRLIKINPHASPPLPLSKTAGDLHKEE
LDKGFVDPIRTITLAHLKQEQDRSRTPTGKDGHLHHLYLEAQHKQQQQRMVQQQQDAGER
DRASKYKEENRRILQESIEVAPFTAKIRSSETDREPNPYRRIPSLPSLPHPHPQRLHQEK
ETEQPAADLYQFKQQAVSQHSLPQSNYFTTLSNSVVNEPPRLYPSKELNTYFEKVSREQG
SAATSSLSLGGTFRSKPPPLIKHQHDGEGLVGKISEQLNQQVGLSTVQRYPLSTIVSPVS
PDISPSSSQTQSQTQSQTQSQTQLRCMPALHRAPVFHPPIQKTLDRKETGYGRLSPPTLT
PIQPVSSASKVSEQQKPPTLLPELREVSAVCKGGAAMTSSEVLRASDSQSHDKLGWHSER
SHGRKPGATTPSVIVRPSTCIKYDGSPGAKTSSSAKDSLTGRMFPGGGPQTVCLKLAEER
ERDRESGGKVILPSTNLEEAVCVQQYKNNFIRVSQSQGTFPVSVSAAANSVCNMRSDVTT
SASNMASYSVLCRREERTYCGSKTSSSSRTESCGPQGRAFHSGPGLGPGAELQQQEGGSS
RTSSPNLHPGPRPSLASSTQVSPSPSLSYSGSFIHLKKHKAALAAAQQSRGPSSSSSGSG
SESLHISPPPPLASASAQDHRTTASPGPQQAGASPSPGPLPNGQPAQMNQSQSQPNYHKL
KKAWLTRHSEEGSNRNINTMIKTEEGSNRNINTMIKTEEDSNRNVNTMIKTEDSNTMIKT
EEADKSVTSTVNPSVSKSVTSTVNPSVSKSVTSTVSPSVSKSVTTTVSPSVSKSVTTTVS
PSVSKSVTTTVSPSVSKSVTTTVSPSVSKSVTSTVSPSVSKSVTTTVSPSVSKSVTTTVS
PSVSKSVTTTVSPSVSKSVTTTVSPSVSKSVTTTVSPSVSKSVTTTVSPSVSEMEMIKPC
TVTLIASTSSDVEMKIEEVKGQEDKMAAEDRNTRRGSKRTYDHDSASESGEDSDASESSK
QEQRAKRQPKPTYKKKQNDLQKRKGEGEKAEEEKANSIFRSAREKTKLKLASSNGIPRSV
LKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVVRSKKGEQPAHSPVFCRFYYFR
RLSYSKNGVIRVDGFSTPDQFDEEALSLWAPDVDEEKEVDPDSSQYILSYIGDQFCQMVT
TENTAATWIKKDAKMAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERK
SSKDKELYSWLKCVKGQQHGHKYLMPTQIIPGTVLTDLVSAMHMFREKYSIKSHCVCTGK
HNTILNKLPAINGVSQVLQNVLNHSNKISLCNVKTEPGQLNPSQGKAETNGGSSPASDTS
SDSKLTPPESQSPLHFLADLAEQKSREEKKENKESPLGKVVKEYHDVSTLESLHCKASGL
VSNRHHDVSALESLHCKASGLVSNRHHDVSSLVSNRHHDVSSLVSNRHHDVSSLVSNITE
QASTLRDLLTTTAGKLRLGSTDAGMAFAPVYSTAAQTGKSGRSMPNILDDIIASVVENKI
PASRGAKLSLKLEATSTTTEEREMKTERKKQPGTGTGPNLNTGTGTGPNLNTGTGTGPNP
NTGTGTGPNPNTGTGTGPNPNTGTGTGPNPNTGTGTGPNPNTGTGTGPNPNTGTGTGPNP
NTGTEDPPVAKLEKTLQLHADIPHCWLYERRLLWLKDHRHPGNRKLFRECWRQGQPVLVS
GLHKPLNAALWKAESFNQEFADHQGDLLNCKDGVISNSGIKEFWDGFEDLTKRPKSKDGD
TIVYRLKDWPSGEEFMALMPSRYDDLMRNLPLPEYCDPEGNLNLASHLPSFFVRPDLGPR
LCCAYGVAASQEQDFGTANLHMEVSDIVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDDS
VKKRLKDSSETPGALWHIYISKDVEKIKEFLHKFAKEQGAEVSAEHDPIREPGWYLSRKL
RQRLWEEHGVQGLTVVQFLGDSVLIPAGALHQVQNLHSCVQVINDFVSPEHVFHSFHLTQ
ELRSSREELNYEDKLQVKNILFHSVKDAVTSLRRCSQEEEEETC
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccctattcattaaatggctaccgggtccgtgtttacagacaagactcagct
actcagtggttcacagggatcatcacacatcatgacctcttcagccgtactatggttgtg
atgaatgaccaggttctagagccccagaacgttgacccgtctacgatacagatgaccttt
ctagacgatgttgtccactctctgctgaaaggagagaacatcggcatccagtccagacgc
aggtcccgttccagcaacaaccagaacaactctgcccacggtcactacacccgcgcccaa
gccaacagccccagaccagtcatgaactcctctggtggtgcggtgaagcaggggtcaggg
gtcaccacccagcagcagcagggtcaaggtcagggcgggtcccagagccagcaagctcca
gcgcagcactccccttgccagggacagacacagcagcaacgtggccctcgcttctccagg
aggaagggatctgacagcagtgtccctgatgatgacaccaagggcaaagaagacaaactg
gacagcaacgagagagcaaggagtggagacttgtctaaaagtatgagcagcaagcagatg
gctgtgaacaagcggaggaaagcggaggaggaagaggagaagaaatcaggtttgaaaaga
ctgaaaaccgagacgacagtgaggtcagacttctctgagggcagtgactctgagatgtct
accaagagaaccaggacggcagactcctcctctgaggaggagctaaaaggaaaggccggc
caggagcggcacaagacccagggttctaagactgggaaggagtctgctctgataggctgt
ctctccccctggggtgaggagcttcagaaggcggagtctcagccgtcgtcagccgacagg
gagcagaggtcatcccagcgacagggggagcggtctcccctgcaacagcagcagccccct
cccctggcctcctcctccctgggctctgccccctctgagggccaaggggagggcatcata
gagaccaacagcactatgaaagccccctcccagacccatccccagtccaaggaccagtac
accagcgttggggtggccaccaggacccagaccccctctcagtatgtaatcgacatcaca
gcagaggacgctaacgcacacatggcctcccaggagaactctgaggccgtctcggccctg
ctggcctcccagaatccatctgagccctcctacatctctgagcccagcagacatttggtg
ctaaacccccctgtgtccccttcctctccccttcgtaagagcccctcagagtgtaaccta
cggaaccagcctccctcggtgtcagagtgtaacctacggaaccagcctccctcggtgtca
gagtgtaacctacggaaccagcctccctcggtgtcagagtgtaacctcacggaaccagcc
tccttcggtcctccctcggtgtcagagtgtaacctacggaaccagcctccctcagtgtca
gagtgtaacctacggaaccagcctccctcggtgtcagagtgtaacctacggaaccagcct
ccctcggtgtcagagtgtaacctacggaaccagcctccctcagtgtccgagtgtaaccta
cggaaccagcctcctcggtcctcctcggtgtccgagtgtaacctacggaaccagcctccc
tcggtgtccgagtgtaacctacggaaccagcctccctcggtgtcagagtgtaacctacgg
aaccagcctccctcagtgtccgagtgtaacctacggaaccagcctccctcggtgtcagag
tgtaacctacggaaccagcctccctcggtgtcagagtgtaacctacggaaccagcctccc
tcagtgtcagagtgtaacctacggaaccagcctccctcggtgtcagagtgtaacctacgg
aaccagcctccctcggtgtccgagtgtaggaagccagagatagagcagcagcacatagca
gggagcctgggcagtaagatagggtttgtccattcagtggtgatcagacctataacatca
gtcagtgagtctgctgctgtagcagagagagagaaggttcagcagcagctatattcctcc
atggtgccctgcattaagaacgcctcattggctgacgaggccaggaagtggcacaagcta
agcccctcccctgatgtccccaagcccctcccctccccagaggccctgaagcctaagccc
ctctgctcctctgacatcatcaagtctaaaacacacagtgttctggagactgggtctaaa
cccaaacccctcacctccccggaggtgtccaagcataaagtccgttacccggacaacccc
cctcgctccagctttaagcccgtcctggcccgagggacagcgtcgccaggttcttgcact
aagagcccgctaatcattgataagaaggagcttttcaccgtgtaccgggaccctgcgctg
gtccgtcccgaccaggagtccaaccacgtgtcctatctgcacccccagctccacccccac
cacctcacctctcacctcctgccctcctcccactcccaccacctcctctccggggtgctc
tctggcctgcctccaggccccctgctggggggtcatccccgtctagactcctcagggctg
gggcacctgggtctagcccaacacccccagccccctggatccctgctttcccagacacac
agccacacctcagcctcatacaaccagctggggctgtaccccattatctggcagtacccc
aacgggacccgctcctaccccccaggactcaacatgcccgggtccaagtgggtgcacccc
gaaaacactgtaaactctgagaccaacatgaggaggaacacggccagcccttggctgcac
caccagcaccctgtctcctcctctgacagcctgggcctactgagccacgtcccggtcccg
gtccgcccagccagcgccgaccctcaccggtccgacccccaccggctcatcaagatcaac
cctcacgccagcccccctctgcccctgtccaagaccgctggagatcttcacaaggaggag
ttggacaagggttttgtggaccccatccgaaccatcactctggcccacctgaagcaggag
caggaccgcagcagaaccccgaccgggaaggacggtcacctgcaccacctctacctggag
gcccagcataaacagcagcaacagaggatggtccagcagcagcaggacgcaggggagagg
gaccgggccagtaagtacaaggaggagaacagacgaatcctccaggagagcatcgaggtg
gcccccttcaccgctaagatccgctccagtgagactgacagggagcctaacccataccgc
cggatcccctcgctcccctccctgccccacccccacccccagcgcctccatcaggagaag
gagacggagcagcctgcagcagacctgtatcagtttaaacagcaggccgtgtcccagcac
agtctcccccagagtaactacttcactaccctgtccaacagtgtggtcaacgagccgcca
cgtctctacccctctaaagagctcaacacgtactttgagaaggtgagcagggagcagggc
tcagcagcaacctctagtctctctctggggggaacgttcaggtccaaaccccctcctctc
atcaaacaccagcatgatggggagggtctggtagggaagatatcagagcagctgaaccag
caggttggcctatccaccgtgcagaggtatcctctcagtaccatagtcagccctgttagt
ccagatatctccccttcctccagtcagacccagagtcagacccagagtcagacccagagt
cagacccagctaaggtgtatgccagctctgcaccgcgcccccgtgttccaccctcctatc
cagaagacactggacaggaaggagacgggctacggccgtctgtctccacccaccctgacc
cccatccagccagtcagctcggccagtaaggtgtctgagcagcagaaaccgcccaccctt
ctgcccgagctacgggaggtcagcgccgtgtgtaagggcggggcagcgatgacctcatcc
gaggtgttgcgagccagcgactctcagagccatgacaagctgggatggcattctgagagg
agccacggcaggaagcccggggccaccacgccgtctgtcatcgtccggccctctacgtgt
attaagtacgacggctcgccaggcgccaagacctcttcttcggccaaggactctctgacg
gggaggatgttcccaggcggtgggcctcagacagtctgcctgaaactggccgaggagaga
gagagagacagggagtctggagggaaggtgatcctgccaagcactaacttggaggaggca
gtctgcgtgcaacagtacaagaacaactttattagagtgtcccagtctcagggaaccttt
ccagtctctgtctcggctgctgccaactctgtgtgcaatatgaggagcgatgtgaccacg
tcagcctccaacatggcctcctacagtgtgctgtgtagaagagaagagaggacctactgt
gggtccaaaacctccagcagtagcaggacagagagctgtggcccccagggcagggccttc
cactcagggcctgggttagggccaggggctgagctccagcaacaggaggggggctcctcc
aggacctcatcccccaacctgcaccccgggcccagacccagcctggccagcagcacccag
gtctctcccagccccagcctgtcctactctgggagctttatccatctgaagaagcacaag
gcagcgttagcagcagcccagcagtccagaggccctagcagcagctccagcggtagtggt
tctgagagcctccacatctcccctccacctccccttgcctcagcctcagcccaggaccac
agaaccacagcaagcccaggaccacagcaagcaggagctagccccagccctggccccctc
cccaatggccagccagcccagatgaaccagagccagtctcaacccaactaccacaagctg
aagaaggcctggctaaccagacactcagaggagggcagtaacaggaatattaacactatg
attaaaacagaggagggcagtaacaggaatattaacactatgattaaaacagaggaggat
agtaacaggaatgttaacactatgattaaaaccgaggacagtaacactatgattaaaaca
gaggaggctgataagtctgttaccagcactgtgaacccctctgtgtctaagtctgttacc
agcactgtgaacccctctgtgtctaagtctgttaccagcactgtgagcccctctgtgtct
aagtctgttaccaccactgtgagcccctctgtgtctaagtctgttaccaccactgtgagc
ccctctgtgtctaagtctgttaccaccactgtgagcccctctgtgtctaagtctgttacc
accactgtgagcccctctgtgtctaagtctgttaccagcactgtgagcccctctgtgtct
aagtctgttaccaccactgtgagcccctctgtgtctaagtctgttaccaccactgtgagc
ccctctgtgtcgaagtctgttaccaccactgtgagcccctctgtgtctaagtctgttacc
accactgtgagcccctctgtgtctaagtctgttaccaccactgtgagcccctctgtgtct
aagtctgttaccaccactgtgagcccttctgtgtctgagatggagatgatcaagccttgc
accgtcactctgattgcctccacctccagtgacgtggagatgaagattgaagaggtcaaa
ggtcaggaggacaagatggccgctgaggacaggaatacgcggcgcgggagcaagaggacg
tatgaccacgactcggcctcggagagcggagaggactctgacgccagcgagagcagcaag
caggagcagagggctaagagacagcccaaacccacctacaagaagaaacagaacgacctg
cagaagaggaaaggagagggagagaaagcggaggaggagaaagccaacagcatcttccgg
agcgccagggagaagaccaagctcaaactggccagcagcaatggtatcccccgctctgtg
ctgaaggactggagaaaggtgaagaagctgaagcagacgggggagtcgttcctgcaggat
gactcgtgctccgagatcggccccaacctgcagaagtgtcgggagtgtcgcgttgtccgc
agcaagaagggggagcagcccgctcattctcctgtcttctgccgcttctactacttccgc
cgcctgtcctacagtaagaatggagtgatccgtgtggacggcttctccactccagaccag
tttgacgaggaggctctgtccctctgggctcctgatgtggatgaggagaaagaggtggac
ccagactcctcccagtacatcctgtcatatataggagatcagttctgtcagatggtcacc
actgagaacactgctgctacatggatcaaaaaagatgcaaagatggcctggaagagggct
gtgagaggggtcagggagatgtgtgacgcatgtgaagccaccttgtttaacattcactgg
gtctgccagaaatgtggctttgtggtttgtctggactgttacaaggcaaaggagaggaag
agctccaaagacaaagagctgtattcctggctgaagtgtgtgaaggggcagcagcacggt
cacaagtacctgatgccaacacagattatccctggaactgttctgacagacctggtgagc
gccatgcatatgttcagggagaaatacagcatcaagtcccactgtgtctgtactgggaaa
cacaacaccatcctcaacaagctgcctgctatcaacggagtctctcaggtcctccagaac
gtgttaaaccacagcaacaagatctctctgtgtaacgtgaagacagagcctgggcagctg
aaccccagtcagggtaaagctgagactaacggaggctccagccctgcctcagacacctcc
tctgactccaaactgactccccctgagtcccagagccctctccacttcctggctgaccta
gctgaacagaagtcacgggaggaaaagaaagaaaacaaggaatctcctctgggtaaggtg
gtgaaggagtatcatgatgtcagcaccctggagtctctccactgtaaagcctctggcctg
gtgtcgaacaggcatcatgatgtcagcgccctggagtctctccactgtaaagcctctggc
ctggtgtcgaacaggcatcatgatgtcagcagcctggtgtcgaacaggcatcatgatgtc
agtagtctggtgtctaacaggcatcatgatgtcagtagtctggtgtctaacatcacagaa
caggcctctactctaagggacctcctgactaccaccgctggtaaactacgtctgggctct
actgatgctggcatggccttcgctcctgtatactccaccgcagcacagacggggaagagt
ggccgtagcatgcccaacatcctggatgacatcatagcatccgtggttgagaacaaaatc
cctgccagccgaggagccaagctgagtctgaagctggaggcgaccagcacaactacagag
gagagggagatgaagacagagaggaagaagcagcctgggactgggacaggtcctaacctt
aacactgggactgggacaggtcctaaccttaacactgggactgggacaggtcctaacccg
aacactgggactgggacaggtcctaacccgaacactgggactgggacaggtcctaacccg
aacactgggactgggacaggtcctaacccgaacactgggactgggacaggtcctaacccg
aacactgggactgggacaggtcctaacccgaacactgggactgggacaggtcctaaccct
aacactgggacagaggaccctcctgtagccaagctagagaagaccctgcagctccacgct
gacatcccccactgctggttgtatgaacgcagactgctctggctcaaagaccaccgacac
cctggcaacaggaagctgttcagagagtgttggagacagggacagcctgtcctggtgtcc
gggctccataagcctctgaatgcagctctgtggaaggctgagagcttcaaccaggagttt
gctgaccaccagggagacctgctcaactgtaaagatggagttatctctaactctggaatc
aaggagttctgggacggcttcgaggacctcaccaagcgacccaagtctaaagacggagac
accatagtgtacaggctgaaggactggccatcaggagaggagttcatggccctcatgcct
tccaggtatgatgacctgatgaggaatctgcccctgcctgagtattgtgaccctgagggg
aacctcaacctggcctctcatctacccagcttcttcgtacgcccagacctcggaccacgc
ctctgctgtgcatatggagtggcagcgtctcaggagcaggactttgggacagctaacctc
cacatggaggtgtccgacatcgtctctgtcctggtgtacgtaggagtggccaaggggaac
ggagtcctgtccaagacgggagtgctgaagagacttgaggaggaagacttggacgacagc
gtgaagaaaagactaaaggattccagcgagacgcctggagccttgtggcacatctacatt
agcaaagatgtggagaaaattaaagagtttctgcacaagtttgctaaggagcagggggcg
gaggtttcagcggagcacgacccaatcagagagccgggctggtacctgagcagaaagttg
cgtcagcgtctgtgggaggagcatggcgtgcagggcttgaccgtggttcagttcctgggg
gactctgtcctcatccccgccggggcgctgcaccaggtgcagaaccttcacagttgtgtc
caggtgataaatgattttgtgtctccggagcatgtgttccactccttccacctgacacag
gaactgagatcctccagggaagagctcaactatgaagataaactacaggtgaagaacatc
ttgttccactctgtgaaggatgcagtgacgtctctgaggaggtgcagccaggaggaggag
gaggagacctgctga
DBGET
integrated database retrieval system
