Coregonus clupeaformis (lake whitefish): 121582456
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Entry
121582456 CDS
T08357
Name
(RefSeq) hamartin-like
KO
K07206
tuberous sclerosis 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
cclu04150
mTOR signaling pathway
cclu04218
Cellular senescence
cclu04910
Insulin signaling pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121582456
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121582456
09143 Cell growth and death
04218 Cellular senescence
121582456
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121582456
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121582456
BRITE hierarchy
Motif
Pfam:
Hamartin
Nup49_C
Motif
Other DBs
NCBI-GeneID:
121582456
NCBI-ProteinID:
XP_041754184
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All DBs
Position
15:39633368..39662972
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AA seq
1277 aa
AA seq
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MAREQPNVGDLLPLLESSDIRQLEEIKGLINEHLSTERGSMLLNGLVDYFLETNSAQAMH
ILSSVREPHDKHLLDKMNECMTKQACRLSTLTLLGHVVRKQPSWIHKIARYPLLLSLLKC
LKTDSDVVVLITGVLVLITLLPMIPQAGKQHLYEFFDIFGRLASWNLKNPGHVSEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENVDTFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKRFEIHDIVIECAKVSLDPKEASCEEGYATMPENLYPQMQLCPKDSASSPFT
DFHSSFGSSSLTPFSTPRQPLPPPLSLPPLSGTQSSYRSPQTSRRQNYSCELNSSCGGKE
LWSPTSLCGMATPPSSRGMSPNPELSHSASYLSGHRVHSTSGGKGTPASSTPATTSPPPT
LSDEFPTIPLTSNTTSPSRKHGRPVEASKPSLVRQEPIRDPEKGGEFIINNNRDASGGES
VSMTLTELSVFMKEQELELQLRTEREEAAITEELLEITEDKRDLAALRGFDSPFYRTTET
LTGTQEKPLPNPPMGGPTLPRDSHHAVSTLDKALENAQGANGGGDNSRGLALEQSWSFQP
MCPFSPIEHPLHQSPSAPEDEVAKFGGLFSPSPSMKNPSLPYEALFDLALPRAASLFVGR
RTSEALGRAALERLCQRQEGLEDREEEGEGMVSASPLEVLDRLVQQGSDAHDKVLNRLPL
PSKSADWTHFGGSAPVDELHALRSQLLLLHSQLLYERYKREQHAVRNRRLLRRIINATAL
EEQNNAMKDQLNLQSVDIVSLKESLQVEQQRCRQLWDDRETVVTRLHSQVRQLQQGRDDY
YTKNQELQSQLNEYQKKMNELEADLQRSNNKVCHTGHLLNQMTTKLSTSERTQQQMSFLN
KQLLLLGEAHKLAVQRQKHTGSDNAMEAQMVQASWGKEVERLRQSLLQQGQKLEAAQQRV
GELETQLTKKEHLIVEQKKFLEDVKGRAKGELQASDSRYQAQRRVTQLLQTELLQLYSRL
EMEGHVCSTTASAGGSSTDPGPPIDSSIMEPDGPVTSGTNECSDDGRPPQSPRRNGITLS
PGQPKANNPPKSPPVNSVNGTQEVPKPLLVEPSLSCPHAPPLPPDATPLTVGSYPSAKSF
LGMRARELFRNKSESQCDEEPPPPRLAGLSQCLKTELCVEPSFPPLGNALTCPVSNPVLN
LTLVPTLSPALASILGAPLTVPAKEHPPETKQRATKQETTRRKMGGARGGAAASSARPRQ
QPQLRIMDYNETHHKHS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggccagagagcagcccaacgtaggggacctcctccctctcctggagtcatctgacatc
cgccaactggaggagatcaaaggccttatcaatgagcacctcagcactgagcgagggtcc
atgctgctgaatggactggtggactacttcctggagactaactcggcccaggccatgcat
atcctctcgtcagtcagagagccacatgataagcacctgttggacaagatgaacgagtgt
atgaccaagcaggcctgccggctgtccaccctcactctgcttggccacgtggttcgcaag
cagccgtcctggatccacaagatcgcccgctacccgctgctgctctcgctgctcaaatgc
ctcaagacggattcagacgttgtggtcctcataactggagtcctggtgttgatcactctg
ctacctatgatcccccaggctggcaaacaacacctgtatgagttctttgacatctttggc
cgcctggcttcctggaacctgaagaacccaggccacgtctccgaggtgtacctcatccac
ctgcacgccagcgtctactcgctcttccaccgcctctacggcatgtacccctgcaacttt
gtgtcctacctgcgctcccactacagcatgaaggagaacgtggacacctttgaggaagtg
gtgaagccaatgctagaacacgtccgtatacacccggaactagttactggaactaaggac
catgagcttgatcccaccaggtggaagaggtttgagatccatgacatcgtcatagaatgt
gcaaaagtgtctctggaccccaaggaagcatcatgtgaggagggctatgccaccatgccc
gaaaacctctacccccagatgcagctttgcccaaaagactcagcctctagccccttcaca
gacttccacagcagcttcggaagctcctctttgacccccttctctaccccccgccagccc
ctgccaccacccctgtccctgccccctctgtcagggacccagtcctcctatcgaagcccc
cagacctccagacgtcagaactatagctgtgaactcaactccagctgtgggggaaaagaa
ctgtggagccctacctccttgtgtggtatggccacacccccttcctccaggggcatgtca
cccaacccagagctctcccatagtgcctcttacctctcaggccaccgcgtccacagcaca
tcaggcgggaaaggaacacctgcctcaagtactcctgccaccacctccccgccccccacc
ctctctgatgagttccccaccatccctctgacctccaacaccaccagtccatcccggaag
catggccgccctgtagaagcatccaaacccagcctggtgaggcaagaaccaatcagagat
cctgagaaaggtggagagttcatcatcaacaacaacagagatgcaagtggtggtgagtcc
gtttccatgacactgacagaactttcagtctttatgaaggagcaggagctggagcttcag
ctgaggacagagagggaagaggctgctatcacagaggagctcctggagatcacggaggac
aagcgggacttggccgccctgaggggctttgactccccgttctaccgcaccaccgagacc
ctgacaggtacccaggagaagcccctgcccaaccccccaatgggcggccccacgctgccc
cgggactcccaccatgctgtgtccaccctagacaaggcactggagaatgcccagggggct
aatggtggtggggacaatagtaggggcttggccctggagcagtcctggtctttccaaccc
atgtgtcccttcagccccatcgaacaccccctccaccagagtccctctgccccagaggac
gaggtggccaagttcggtggcctgttctcccccagcccctccatgaagaacccctccctg
ccctacgaggccctgtttgacctggctctgccccgggccgcatccctcttcgtgggtagg
aggacgtcggaggccctgggcagggctgccctggagaggctgtgccagcggcaggagggg
ctggaggacagggaggaggagggcgaggggatggtgtcggcttcccccctggaggtgctg
gatcgtctcgttcagcagggaagcgacgcccacgacaaggtgctcaacagattacctttg
ccaagcaagtcagctgactggacacattttggaggctcggctccggtggacgagctgcac
gcgttgcgtagccagctgctcctgctgcacagccagctgctgtacgaacgctacaagaga
gagcagcacgccgtccgcaaccgacgcctactgcgacgcatcatcaatgccaccgcgctg
gaggagcagaacaacgccatgaaggaccagttgaacctgcagagtgtggacatcgtgtct
ctgaaggagagtctgcaggtggagcagcagcggtgcagacagctgtgggacgacagagag
actgtggtcacaagactacacagccaggtccgccagctacaacagggccgggacgactac
tacaccaagaaccaggaactgcagagtcagttgaatgagtatcagaagaagatgaatgag
ctggaggcagatctgcagaggtccaacaacaaggtgtgccacacggggcacctactcaac
cagatgaccaccaagctgagcaccagtgagcgcacccagcagcagatgagcttcctgaac
aagcagctgctgctcctgggggaggcccacaagctggctgtacagcggcagaagcacaca
ggctcagacaacgccatggaggcccagatggtgcaggcatcctgggggaaggaggtggag
aggctgaggcagagcctgctgcagcagggccagaagctggaggcagcgcagcagagggtg
ggcgagctggagacacagctcaccaagaaggaacacctcatcgtggagcagaagaagttc
ctggaggacgtcaagggccgggctaagggcgagctgcaggcgtcagacagcaggtaccag
gcccagaggagagtgacccagctcctgcagacggagctgctgcagctctacagtagactg
gagatggagggtcatgtctgctctaccacagcctcagcagggggcagcagtaccgatcct
ggccctcctatagactctagtatcatggagccagatggaccagtcacatcagggaccaat
gagtgctcagatgacggcagaccacctcagtccccacgacgcaacggcatcactttatct
ccagggcaaccaaaggcgaacaacccccccaagtcgccccctgtcaactcggtcaacggc
acccaggaagtccccaagcctctccttgtggagccttccctctcctgtccccatgccccc
ccactgccccccgacgccacccccctcactgttggctcctaccccagcgccaagagcttc
ctgggcatgcgggcgcgggagctgttccggaacaagagcgagagccagtgtgacgaggag
ccgccgcccccccgcctggccggcctttcacagtgcctgaagactgagctgtgtgtggag
ccctcatttcccccactggggaatgctctgacatgtcctgtctctaaccctgtccttaac
cttacccttgtccctaccctttcccctgcccttgcgtctatactgggtgcccctctcact
gtgcccgccaaggagcacccgcctgaaaccaagcagagagctaccaagcaggagactacc
agacggaagatgggaggagcaaggggaggggcggcggccagttcagcacgacccagacag
caaccgcaactaaggatcatggactacaacgaaacgcatcacaagcacagttaa
DBGET
integrated database retrieval system