Campylobacter concisus ATCC 33237: CCON33237_1330
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Entry
CCON33237_1330 CDS
T04635
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ccoc
Campylobacter concisus ATCC 33237
Pathway
ccoc03030
DNA replication
ccoc03430
Mismatch repair
ccoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCON33237_1330 (holA)
03430 Mismatch repair
CCON33237_1330 (holA)
03440 Homologous recombination
CCON33237_1330 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoc03032
]
CCON33237_1330 (holA)
03400 DNA repair and recombination proteins [BR:
ccoc03400
]
CCON33237_1330 (holA)
Enzymes [BR:
ccoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCON33237_1330 (holA)
DNA replication proteins [BR:
ccoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCON33237_1330 (holA)
DNA repair and recombination proteins [BR:
ccoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCON33237_1330 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1801
Motif
Other DBs
NCBI-ProteinID:
ALF47990
UniProt:
A0A0M4SI11
LinkDB
All DBs
Position
1315300..1316298
Genome browser
AA seq
332 aa
AA seq
DB search
MYRKDLELNLANANLSNYFLLFGADEFQIELFGKEILSFYSSEDANLLSLYFDEYNYAQA
SSHLSEQSLFGGKNILYIKSDKKIPAKELKELILLCSKSQDNYFLFELYESDMKLVFDTQ
KAFGTNFARFFKPSTPDEAINLLAKNSAKIGLNITKNALYELYFTHNENLYLAASELTKL
KSLNTHIEQDDVKRLVFGLGGINFDDFFNKFMALKDIKNDFFTYLEDPNFNEIFLLNSLY
KAFFRLFKIYSYIKVNGRLNLDEAIGYQPPVNVANLLKANSLKPNLNTYLEIFKTLNLAE
LELKTNTKMDKEIFVLSTILNLQHLISTANIK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaaagatttggagctaaatttagcaaatgcaaatttaagcaactacttcttg
ctttttggggcggatgagtttcagatcgagctttttggcaaggagattttgagcttttac
tcaagcgaagatgcaaatttgttaagcctttattttgacgagtacaactacgcgcaagca
agctctcacctaagcgagcagtcgctttttggcggcaaaaatatcctttatataaaaagc
gacaaaaagatcccagcaaaagagctaaaggagctcatcttgctttgctcgaaaagccag
gataactacttcctatttgagctttatgagtccgatatgaaactagtttttgatacgcaa
aaggcttttgggacaaattttgctagattttttaagccctcaactccagatgaagcgata
aatttactagccaaaaactcagccaaaataggcctaaacataaccaaaaacgcactttat
gagctttactttacgcataatgaaaatttataccttgcagcaagcgagctaacaaagcta
aagagcctaaacacacacatcgaacaagatgatgtaaaaaggctggtttttggacttggc
gggataaattttgatgatttttttaataaatttatggctctaaaagatataaaaaacgac
ttttttacctacttagaagatccaaattttaatgaaatttttcttctaaactcgctttac
aaagcattttttaggctatttaaaatttactcttatataaaggtaaatggtcgcttaaat
ttagatgaggcaattggttatcaaccgcctgtaaatgtcgcaaatttattaaaagcaaat
agcttaaaaccaaatttaaatacatatctagagatatttaaaacgctaaatttagccgag
ctagagctaaaaacaaacacaaaaatggataaagaaatttttgtattatcaactatttta
aatttgcaacatctcatatcaacagcaaatattaagtaa
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