Campylobacter coli RM5611: YSU_06615
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Entry
YSU_06615 CDS
T03167
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi03030
DNA replication
ccoi03430
Mismatch repair
ccoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YSU_06615
03430 Mismatch repair
YSU_06615
03440 Homologous recombination
YSU_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoi03032
]
YSU_06615
03400 DNA repair and recombination proteins [BR:
ccoi03400
]
YSU_06615
Enzymes [BR:
ccoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YSU_06615
DNA replication proteins [BR:
ccoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YSU_06615
DNA repair and recombination proteins [BR:
ccoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YSU_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
HTH_52
DKNYY
Motif
Other DBs
NCBI-ProteinID:
AHK75517
LinkDB
All DBs
Position
complement(1301051..1301812)
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AA seq
253 aa
AA seq
DB search
MSLQQVDQIISILSKQSKPYEWVIKEFKKIEELKDYELDLETFELLGLGLTLDKNNIFTL
QTRTKKIKEEIFCIVDIESTGGIKNGQILEIGAVKIKNLQEIDRFSSLVQVKEIPENITE
LTGINLDMVKDAPSLTKVLNDFRLFLKDSIFVAHNVRFDYGFISKALNECGFGILLNRRI
CTIEFAQCCIESPRYKLDVLKELLGIKNAHHRALNDALAAAEIFKHCLGKLPYHIKTTEE
LINFTKTSRIKQK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttgcagcaagttgatcagattatttctatcttaagtaagcaaagtaagccctat
gagtgggtaattaaagaatttaaaaagattgaagaattaaaagattatgaacttgattta
gaaactttcgagcttttgggtttgggtttaactctagataaaaataatatttttaccttg
caaacgcgtacaaaaaagatcaaagaagaaattttttgcattgtagatatagaaagtaca
ggcgggattaaaaacggacaaattttagaaataggtgcagttaagataaaaaatttgcaa
gaaatcgatcgttttagctctttggtacaggtaaaagaaattcctgaaaatattacagaa
cttacaggaattaatttagacatggtaaaagatgcaccgagtttgactaaggttttaaat
gattttagactttttttaaaagacagtatttttgtcgcacataatgtgcgttttgattat
ggttttatttccaaggctttaaatgagtgtggttttggaattttgcttaatcgtcgtatt
tgcaccatagaatttgcgcaatgctgtatagaaagtccaagatataaattagatgtttta
aaagagcttttagggataaaaaatgcccaccatagagctttaaacgacgctttggctgcg
gctgaaatttttaaacattgtcttggcaaactcccttatcatatcaaaaccactgaagaa
cttataaattttaccaagacttctcgcataaagcaaaaataa
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