Coprococcus comes: I6K69_04305
Help
Entry
I6K69_04305 CDS
T07118
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccom
Coprococcus comes
Pathway
ccom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I6K69_04305
09124 Replication and repair
03420 Nucleotide excision repair
I6K69_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccom03021
]
I6K69_04305
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_04305
Enzymes [BR:
ccom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
I6K69_04305
Transcription machinery [BR:
ccom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
I6K69_04305
DNA repair and recombination proteins [BR:
ccom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
I6K69_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
Phage_T7_Gp13
Helicase_C
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QRT50524
LinkDB
All DBs
Position
complement(829145..831517)
Genome browser
AA seq
790 aa
AA seq
DB search
MDENLPVIRISVRNLVEFILREGDIDNRTGGGQDPENMQMGSRIHRKIQRQMGSDYQAEV
PLKTEIVCDGFTLKIEGRADGLIHTKEQVMVDEIKGVLRELDRVQEPAGIHLAQAKCYAS
MVAEQEGADEIGVQMTYCQMETEEVKRFQYSYQSNELKVWFDEVIRQYKKWAKFQIEWRK
ARNASIKGIEFPFPYRKGQRELAVSVYRTILRKKKLFIQAPTGVGKTISTVFPAVKAVGE
ELGEKIFYLTAKTITRTVAEQAFKTLREQNLKFKVITLTAKEKICFCEETSCNPDDCPYA
KGHFDRVNDAVYELLMQEDVMSREVLEAQARKHKVCPFEMALDVSTWVDGVICDYNYVFD
PDARLRRFFAEGGAGGYLFLIDEAHNLVERGRQMYSAELCKEDFLAVKKLVKGEAPRFAK
RLEACNKILLAMKKECENYKVLDNISHFGIQLMNVLSETDRYLEECVDKEVRETVLDFYF
QVRSFLNIYDGLDENYVIYTEYQENGRFVLKLFCVNPAANLQKCLDKGNSAVFFSATLLP
IQYYKRLLSTEKDNYAVYIDSSFDTKKRLLMNGVDVSTRYTMRSREMYQRYATYIFRVVK
AKMGNYLIFFPSYRFMEDVYQEFTQLLASDEEEMELVIQQKHMDEEERENFLRAFEMGRE
KSLIGFGVLGGIFSEGIDLTNEKLIGTLIIGTGLPQVCNEREILKSYFDQKGLYGFDYAY
RYPGMNKVLQAAGRVIRTEDDRGVILLLDERFQREKGKEIFPKEWADCERCRLDIVEEKI
RLFWEKQTDN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatctcccggtgatccggatttcggtgcgaaaccttgtggagtttatttta
agagaaggggatattgacaatcgaacaggaggcggacaagatccggagaatatgcagatg
ggaagtcggattcaccggaagatccagagacagatgggatcggattatcaggcggaggta
cctcttaagacagagattgtctgtgatgggtttactttgaaaatagaaggacgtgccgat
ggactgattcatacaaaagagcaggtcatggtagatgagatcaagggtgttctgcgggaa
cttgaccgggtgcaggagccggcaggcattcatctggcacaggcaaaatgttatgccagc
atggtagcagaacaggaaggggcggatgagatcggggtacagatgacctattgccagatg
gagacggaagaggtgaaaaggtttcagtattcttatcagagtaacgaactgaaagtctgg
ttcgatgaagttattcgacagtataaaaaatgggcaaagttccagattgaatggagaaag
gcaagaaatgcatctattaaagggattgaatttccgtttccatatcgtaaagggcagaga
gagcttgcggtatctgtttaccggacgattcttcggaagaaaaagttgttcatccaggca
ccaaccggagtggggaagacgatttcaacggtatttccggcagtgaaagcggttggagaa
gaactgggtgagaagattttttatctgacggcaaagacaatcacccggacggtggcggag
caggcattcaaaaccttacgggaacagaatctgaagttcaaggtgatcactttaacggca
aaagaaaaaatctgtttctgtgaggagacaagctgcaatccggatgactgcccatatgcc
aaagggcattttgaccgggtaaatgacgcggtctatgagcttttgatgcaggaagatgtg
atgagccgggaagtgttggaagcgcaggcaagaaagcataaggtctgtccatttgaaatg
gcactggatgtgtcgacctgggtggatggtgtgatctgcgattataattatgtgtttgac
ccggatgcccggctcaggcgtttctttgcagaaggtggcgctggaggatatttgtttctg
atcgatgaggcacacaatctggtagaacgtggacggcagatgtacagtgcagagttatgc
aaggaggactttcttgcggtgaagaaactggtaaagggagaagcaccgcggtttgcaaaa
agactggaggcatgcaataagattcttctggcaatgaaaaaagagtgtgaaaactataag
gtgctggacaatatttcgcattttggaatccagcttatgaatgtactatctgagacagac
cggtatctcgaggaatgtgtggataaagaagtccgggaaaccgtattggatttttatttt
caagtgaggtctttcctgaatatatatgatgggttggatgagaactatgtcatctatacg
gagtatcaggagaatggaagatttgttctgaagttgttttgtgttaacccggcggcaaat
ctgcagaaatgtctggataaggggaacagtgctgtattcttttcggcaacacttctgcca
atccagtattacaaaagacttctgagtacggaaaaagacaactatgcggtctacattgat
tcttcgtttgatacaaagaagagactgcttatgaatggtgtggatgtgagtacccgttac
accatgcgttccagggaaatgtatcaacgatatgcgacatacattttccgggtagtgaaa
gcaaaaatggggaattatctgatttttttcccgtcttaccggtttatggaagatgtgtat
caggaatttacacagcttcttgcatcagatgaagaagagatggaactggttattcagcag
aagcacatggatgaagaagaacgggaaaatttcctgcgtgcatttgaaatgggaagagag
aaaagtctgatcggttttggagttcttggcgggattttctcagaaggaatcgatctgaca
aatgagaagctgatcgggacactgatcatcggaacagggctgccgcaggtgtgcaatgag
cgggaaatcctgaaaagctattttgaccagaagggactttacggatttgactatgcttac
cggtatccggggatgaacaaggttttgcaggcggcaggaagggtgatccgcacagaggat
gaccgcggagtgatacttcttctggatgagcgttttcagagggagaaggggaaagagatt
ttcccgaaagaatgggcggactgtgaaagatgccggttagacattgtggaagaaaaaatc
cgtctgttctgggaaaaacagacggataattaa
DBGET
integrated database retrieval system
