Cronobacter condimenti: AFK62_10515
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Entry
AFK62_10515 CDS
T04060
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccon03016
]
AFK62_10515
Enzymes [BR:
ccon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AFK62_10515
Transfer RNA biogenesis [BR:
ccon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AFK62_10515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
ODP
Motif
Other DBs
NCBI-ProteinID:
ALB62911
UniProt:
K8A4M3
LinkDB
All DBs
Position
2304212..2306146
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAVIHTEKEKESAEPEELIEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIPCRAERGVSH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEREAPDGVAT
EMLDENLTREDLTALDFVTIDSASTEDMDDALFVETLDGDRLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLREGEARPALVCRMIIDAEGAISDEIHF
FAATIESKAKLAYDNVSDWLEEKGDWQPGSEAIAAQIRLLQQICQRRSAWRQKHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHAGFD
PASTEQLATLLQSHGMHVDANDVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESATRPQEASTVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LACSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgcttgcgcagcttaaacagcaactgcattcccagacgccg
cgcgccgaaggggtagtaaaagccacggaaaaaggttttggtttccttgaggttgacgcg
cagaaaagctacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcgtc
attgccgttatccatacggaaaaggaaaaagaatccgccgagccggaagagcttatcgaa
cccttcctcacccgctttgtgggccgggtgcaaaagaaagacgatcgtctctccattgtt
cccgatcatccgctactgaaagatgccatcccgtgtcgcgctgaacgcggcgtgagccat
gatttccagaatggcgactgggctgtggccgaaatgcgtcgtcatccgctgaaaggcgat
cgcggcttttatgccgaactcacccagtttattacctttagcgacgatcacttcgtgccg
tggtgggtgactcttgcgcgtcataacctcgaacgtgaagcgccggatggcgtggcgacc
gaaatgctggatgaaaacctgacgcgtgaagatctgaccgcgctggatttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgccctgtttgtagaaacgctggatggcgat
cgtctgcaactgaccgtcgcgattgccgacccgacagcgtggatagccgaaggcagcaaa
ctcgataacatcgcaaaagtacgcgcgttcactaactatctgccgggctttaatatcccg
atgctgccgcgcgagctttccgacgacctctgttcgctgcgcgaaggcgaagcgcgtccg
gcactcgtttgccgcatgattattgacgccgaaggcgctatcagcgacgagattcacttc
ttcgccgccaccatcgaatccaaagccaagctcgcctatgacaatgtctccgactggctg
gaagagaaaggcgactggcagccgggtagcgaggctatcgccgcgcagatccgtctgctg
caacagatttgccagcgccgcagcgcctggcgtcagaaacacgcgctggtctttaaagac
cgccctgattaccgcttcgtgctgggcgagaaaggcgaagtgctggatatcgttgccgag
ccgcgtcgtatcgctaaccgtattgtggaagagtccatgattgcggcgaacatctgcgcg
gcgcgcgtgctgcgcgacaagctgggctttggcgtttacaacgtccacgcgggcttcgac
ccggcaagcaccgaacagctggccacgctgctgcagagccacggtatgcatgttgacgcc
aatgatgtgcttacgctgcctggtttctgcaaactgcgtcgcgagctggacgcgcagccg
tcaggcttcctcgacagccgcatccgccgcttccagtcctttgcagagatcagcaccgag
ccgggtccgcattttggtcttggccttgaggcatatgccacctggacctctccgatccgt
aagtatggcgatatggttaaccatcgtctgctgaaagccattattaaaggcgagagtgcg
acacgtccgcaggaagcgtctaccgttcagatggctgagcgccgtcgtcttaaccgtatg
gccgaacgcgatgtcggtgactggctgtatgcgcgtttcctgaaagacaaagccggcacc
gatacccgttttgctgcggaaattatcgatgtcagccgtggtggcatgcgcgtgcgtctg
gtggataacggtgcggttgcctttatccctgcgccattcctgcacgcggtgcgcgatgaa
ctggcctgcagccaggaaaatggtaccgtccagatcaaaggcgaaaccgtctataaagtc
accgacgttatcgacgtcaccatcgcagaagtgcgtatggaaacccgcagtattatcgcg
cgtccggttgcctga
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