Corynebacterium confusum: CCONF_06840
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Entry
CCONF_06840 CDS
T09352
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ccou
Corynebacterium confusum
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCONF_06840 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccou03021
]
CCONF_06840 (sigA)
Transcription machinery [BR:
ccou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCONF_06840 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WJY89890
LinkDB
All DBs
Position
1465862..1467286
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AA seq
474 aa
AA seq
DB search
MAATDSSDKVLGEDAEANTPAGKPAAKAAKKTAKKTAKKTAKKSAKKTAKKSAKKTAKKS
TRKAAPKKAATKKAKDDEQNLAATAAEEQKPETDAEDEFGASVTDDDFEPDHADLEEHLD
DEEDDLAGDVDEEDEDEDDGSSVWDEEESAALRQARKDAQLTASADSVRAYLKQIGKVAL
LNAEQEVSLAKRVEAGLYAQHRMDEMQKALADGDKDAKLSPSLKRDLRTISRDGRKAKNH
LLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQA
ITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDITEEKVLEIQ
QYAREPISLDQTIGDEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLQDVLTTLSEREAGV
VRLRFGLTDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccactgattcttccgacaaggtactcggcgaggacgcagaggcaaatacccct
gcgggaaagcctgccgccaaggcggcaaagaagacggccaaaaagaccgccaagaagacc
gctaagaagtcggcgaagaaaacggctaagaagtcagctaaaaagaccgccaagaagtcg
acccgtaaggctgcgccgaagaaggcggccaccaagaaggccaaggacgacgagcagaac
ctcgccgccaccgcggccgaggagcaaaagccggagaccgacgccgaggacgagttcggc
gccagtgtcaccgacgacgacttcgagccggaccacgccgacttggaagagcacctcgac
gacgaggaagacgacctggccggcgacgtcgacgaggaggacgaggatgaagacgacggc
tcctcggtctgggacgaggaagaatccgccgcgctgcgccaggcccgcaaggacgcccag
ctgaccgcgtccgcggactccgtgcgcgcctacctcaagcagatcggtaaggtcgccctg
ctgaacgcggagcaggaggtctcgctggccaagcgcgtcgaggccggcctctacgcccag
caccgcatggatgagatgcaaaaggcgcttgccgacggcgacaaggacgccaagctctcc
ccgtcgctcaagcgcgacctgcgcaccatctcccgcgacggccgcaaggccaagaaccac
ctgttggaggccaacctccgcttggtggtctccctggccaagcgctacaccggccgcggc
atggccttcctcgacctcatccaggaaggcaacctggggcttatccgcgccgtggagaag
ttcgactacaccaaggggtacaagttctccacctacgccacctggtggatccgccaggcc
attacccgcgccatggccgatcaggcccgcacgatccgtatcccagtacacatggtcgag
gtcatcaacaagctgggccgcatccaacgcgagctgctgcaggacctgggccgcgagccc
accccgcaggagctggccaaggagatggacatcaccgaggaaaaggtgctggaaatccaa
cagtacgcgcgcgagcccatctcgctggaccagaccatcggcgacgagggcgacagccag
ctgggcgacttcatcgaggactccgaggccgtcatcgccgtcgatgccgtctccttcacc
ctcctgcaggaccagctccaggacgtgctgaccaccctgtccgagcgcgaggccggcgtg
gtgcgcctgcgcttcggcctgaccgacggcatgccgcggactttagacgaaatcggccag
gtctacggcgttacccgcgagcgtatccgccagatcgagtccaagaccatgtcgaagctg
cgccacccctcgcgctctcaggtcctgcgggattacctcgactaa
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