Chondrus crispus (carragheen): CHC_950
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Entry
CHC_950 CDS
T02916
Symbol
rbcL
Name
(RefSeq) ribulose bisphosphate carboxylase, large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00630
Glyoxylate and dicarboxylate metabolism
ccp00710
Carbon fixation in photosynthetic organisms
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
ccp01200
Carbon metabolism
Module
ccp_M00165
Reductive pentose phosphate cycle (Calvin cycle)
ccp_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CHC_950 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
CHC_950 (rbcL)
Enzymes [BR:
ccp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
CHC_950 (rbcL)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
14971210
NCBI-ProteinID:
YP_007627452
UniProt:
M5DDJ6
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All DBs
Position
PT
AA seq
488 aa
AA seq
DB search
MSQSVEERTRIKNERYESGVIPYAKMGYWDPDYVVKDTDVLALFRVSPQPGVDPVEASAA
VAGESSTATWTVVWTDLLTACDLYRAKAYKVDAVPNTTDQYFAYVAYDIDLFEEGSIANL
TASIIGNVFGFKALKALRLEDMRLPVAYLKTFQGPATGVICERERMDKFGRPFLGATVKP
KLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWKERYLYSMEGVNRAIAAAGETK
GHYLNVTAATMEQIYERAEFAKQLGSIIVMVDLVIGYTAIQSMAIWARKNDMILHLHRAG
NSTYSRQKIHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPVMIQGFYNTLLLPYLEVN
LPQGIFFEQDWASLRKVTPVASGGIHCGQMHQLLDYLGDDVVLQFGGGTIGHPDGIQAGA
TANRVALESMVIARNEGRDFVAEGPQILQDAAKTCGPLQTALDLWKDISFNYTSTDTADF
VETPTANV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatctgtagaagaacggacaagaattaaaaatgaacgttacgaatctggtgta
attccatacgctaaaatgggatactgggatccagattatgtagtgaaagatacagatgta
ttagcactattccgtgtatctcctcaaccaggagtagatccagtagaagcttctgctgca
gttgctggtgaatcatctactgcaacttggacagtagtttggacagatcttttaaccgct
tgcgacttatatagagcaaaagcatacaaagtagatgctgtaccaaatacaactgatcaa
tattttgcatatgttgcatatgatattgatttatttgaagaaggttcaattgctaactta
acagcttcaattattggtaatgtatttggttttaaagctcttaaagctttaagattggaa
gacatgcgtttacctgttgcttatttaaaaacttttcaaggtcctgcaacaggcgtaatc
tgtgaacgtgaacgtatggataagtttgggcgtccatttttaggtgcaactgttaaacca
aaattaggtctatcaggtaaaaactatggtcgtgtagtatatgaaggtcttaaaggtggc
ttagacttcttaaaagatgatgagaatatcaattctcagcctttcatgcgttggaaagaa
agatacctgtattcaatggaaggtgtaaatcgtgctattgccgctgctggtgaaacaaaa
gggcattatttaaatgtaacagcagctacaatggaacagatctatgaaagagctgaattt
gctaaacagcttggcagtatcattgttatggttgaccttgtaattggttacacagctatt
caatcaatggctatctgggctcgtaaaaatgatatgattcttcatttgcatcgtgcaggt
aactctacttattctcgtcaaaaaattcatggtatgaattttcgagtaatatgcaaatgg
atgcgtatggcaggtgttgaccatattcatgcaggtactgttgtaggtaaattagaaggc
gatcctgtaatgatccaaggtttctataatacactactactgccatatttagaagtaaat
ttaccacaaggtatattctttgaacaagattgggcatctcttagaaaagttacgcctgtt
gcttctggcggtattcattgcggacaaatgcatcaattattagattaccttggcgatgat
gttgttcttcaattcggcggtggtactattggtcaccctgatggtattcaagcaggagca
acagctaaccgtgtagctctagaatcaatggttatagctcgtaatgaaggacgtgatttt
gtagcagaaggaccacaaattttacaagatgcagcaaaaacttgtggacctttacaaaca
gctctagatttatggaaagatattagctttaattacacttctacagatacagctgatttt
gtagaaactccaacagctaacgtttag
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