Chondrus crispus (carragheen): CHC_T00000339001
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Entry
CHC_T00000339001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00000339001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
CHC_T00000339001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
BRF1
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
17321165
NCBI-ProteinID:
XP_005713447
UniProt:
R7QQ93
LinkDB
All DBs
AA seq
556 aa
AA seq
DB search
MSTSALKCPNCDSYDIDTDTARGEATCVECGTVLEQNLIVSEVGFSEDARGRSNVIGQHV
RADGRLSSYGALRGFSREATELTMQNGKRRLGHLASSLGLNTQKYTEGALRLFRVAVERN
FHKGRRMANVCCACLYIVCRMERTAHMLLDFADVLETNLYDLGHTFLKLGKILSIQLPII
DPSLYIHRFANKLEFGEVTNAVAMSALRLIARMQRDWMNEGRRPSGLCGAALLIAARMHD
FYRSQADVTRVVRIGNVALRDRLTELHNTSTATLTAAQIDAGGGDDGKWTSLNISDGSEA
CDPPAFQRLEARRALLAKRKRTNDADSETAEDESCSTAGGGSVKKVRITPGKGGRTTEDE
QLEGEFAKVLASSELQELEQETNVEEELVLAAQKRRAAEKETDLEGDSEDEEDDEIEKEA
DDGELSDLDEEDAEKYLNTEEEYERKKELWTEVNKEYLEKQEKLERMKRENPEEYKRLRP
WRNTQKKKKTARSGKTSRGTEKDDEEPQPVAPKPSKKLNYSVLKTLGEPGGAGLLGSVQP
VPASGALPPLAPRADT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatctgcgttgaagtgtcccaactgcgacagctatgatatagatacagacacc
gcccgtggtgaggcaacttgcgtcgagtgcggcacagtcttggagcagaatctcatcgtc
agcgaggtcggtttctcagaagatgcgcgcggccgctctaacgtcattggacagcacgta
cgtgcagacggccgtctcagctcgtacggagctttgcgaggcttctcccgcgaggccacg
gaactcaccatgcaaaatggaaaacggcggcttgggcatctcgcctcctcactcggcctc
aatactcaaaagtacacggagggcgctttgcgtctcttccgtgtcgctgttgaacgcaat
tttcacaaaggaaggcgtatggcaaacgtttgctgtgcctgtctctacatcgtgtgcagg
atggagcgcacagcgcacatgttgcttgattttgccgatgtcctggagacaaacttgtac
gacttgggccatactttcttgaagctggggaagatcttgtctattcagttgcctatcatt
gatccgagcttgtacattcatcgattcgccaacaaactggagttcggcgaggtgacaaac
gcggtggccatgtccgcgcttcggcttatagcaagaatgcagcgagattggatgaacgaa
ggccgtcgcccaagcgggctttgcggtgcagccctcctcatcgcggcgcgcatgcacgac
ttctatcggtcgcaagcggacgttacccgagtcgtccgtattggcaacgtcgcattgcgc
gatcgtctcacggaattacacaacacttctacagcgaccttgacggcagcgcagattgat
gctggtggtggagatgatggaaaatggacgtccctcaacatttctgatgggtcggaagcg
tgcgatcctcccgcttttcaacgtctagaggctaggcgagctttactggcaaagcgaaag
aggacaaatgacgcagatagcgaaacagcggaagacgaatcctgttccactgcgggaggt
ggcagtgtgaaaaaagttcgtattactccagggaaaggtggccggacgactgaggacgaa
caactggaaggtgagttcgcgaaagttctggcaagctcagaactccaagagttggaacag
gagacgaacgtggaggaggagctggtgttagccgcccaaaaacgaagggctgccgaaaag
gaaacagacttggaaggcgattctgaagatgaagaggatgatgagatagagaaagaggca
gacgacggggagctcagtgaccttgacgaagaagatgcagaaaaatacttgaacactgag
gaggagtatgagcggaagaaagaactttggaccgaagtgaataaggagtatttggaaaag
caagagaaattggaaaggatgaagcgggaaaatccagaagagtacaaacgtttacggcca
tggagaaacactcagaaaaagaagaagactgctcgttctggaaaaacatcgcggggtacg
gagaaagacgacgaagaaccacaaccagtcgctccgaagccatcaaagaaactcaattac
tcggttctcaagacacttggggagccaggcggggctggtttgctaggatctgttcaacca
gttccggccagcggtgcacttccacccttggcacccagggcagatacttag
DBGET
integrated database retrieval system