Chondrus crispus (carragheen): CHC_T00000900001
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Entry
CHC_T00000900001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
rve
Chromo
rve_3
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
17318934
NCBI-ProteinID:
XP_005711216
UniProt:
R7QR08
LinkDB
All DBs
AA seq
704 aa
AA seq
DB search
MCNVYRRFVKGFAKIAAPLNRKTGKNQPFEFEVLTDEEYEAFVELKKRLVSPPILALPRY
GKKYTLDTDACAYQVGCALLQEQPDGDRLPIGYWSRALTDAERNYTTTEKECLAVVWSIL
TLRPYLYGNTSGPLERWRLRLAEYDYDVQYRPGIKHQLAGGVSRLREEHNPRQGTVHWET
PVDPGRAEHAFAVIPEERDVSSVTVEEFLREQAEDPFCRAAAETVGNPDSRYDVDRYGFV
VRKSPLDGTLQRVVPKRLRAKILYLAHHPRLAGHPGGTRMYYTLRREYYWPHMANDAFST
VRNCASCAATRRTLVRHQKDLKLFPAAGPLDFVAMDLLGPLLKTAHGNRHVLVMTDRFTK
LTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLT
TAYHPQTNGQTERFNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLV
LTRPPSGLALPGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRRYKAD
FDKKVRFRPVIEKGDRVYVDRPPRPLTSTERGDLPSNDGGPSVKLLPKTEGPFPVRSATE
TTVVVDQDGVSNRVSIDRITRMPRGPRDVTAAAATQPAAGGEPEPAAEYVIDHLVGHREN
RTGTQYKVRWYGYAPADDTWEPAEGLPQAFIDRFWRTRAATRHH
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatgtttaccgccggttcgtgaagggcttcgcgaaaatagccgctccgcttaac
cggaagacggggaaaaatcaacccttcgagtttgaggttcttaccgatgaggaatacgag
gcgttcgtggaactaaagaagcgcctcgtgtccccaccgatcctcgctctaccccgttac
ggaaaaaaatacaccctggatacggacgcttgcgcgtaccaggtcggctgtgccctacta
caggagcagccggacggcgaccgcctaccgatcggttattggagccgcgctctcacggac
gcggagaggaactacaccactaccgagaaggaatgcctcgccgtcgtatggagtattctc
acgcttcgaccatacctgtatgggaatacctccggcccgctagagcgctggcgtctccgc
ctagccgagtacgactacgacgtacagtaccggccgggtattaagcaccaactcgcgggt
ggtgtatcacgcctccgagaggagcataacccccgccaaggtaccgtacactgggagacc
cccgtcgacccggggagagctgagcacgcgttcgcggttatacccgaggaacgcgacgtc
tcatccgtaacggtggaagagttccttcgggaacaggccgaggaccccttctgtagggcg
gccgccgagactgtagggaacccggactcgcggtacgacgttgaccgatacgggttcgtc
gtccgcaagtcccccctcgatgggaccctgcagcgggttgtaccgaagcggctccgggcg
aagatattgtacctcgcccatcatccccgcctagccggacacccgggcggtacgaggatg
tactataccctccggcgggaatattattggcctcatatggccaacgacgccttcagtacc
gtacggaactgcgcgtcatgcgctgccacccggcgaaccctggtgaggcaccagaaggat
ctcaagctcttcccagcggcaggaccgctggatttcgtcgctatggacctgctgggtcct
ttactgaagacggcgcacgggaatcgccacgtgctcgtcatgaccgaccggtttacgaag
ctgacgcgcagcatcccgttacggacaaccaccgcgtcggtcgtggcaaacgccttcctg
gacaattgggtctacgtatacggcgcacctcgttacgtgttaaccgataacggaccacaa
tttgccgccaagttcttcgacgcggtgtgcgccttgctgggggtgaggcactacctgact
accgcctatcacccccagacaaatggacaaaccgaacggttcaaccgtactctggtacag
cgcctccgacattatgtcgcggagcatcagagggactgggacgaatacatccagcccctg
accttcgcgtataacacgcaggtccaccggtcgacggagacaaccccgttcgacctggtg
ctgacgcgaccaccgtccggtttggccctaccgggtactgtaccgcaggatgccgtctcc
aacacggaagatccgaggaccccggtacagtacaagcgcgcgacgctgcgtaaactccgc
gacgcccttgagcgcacgcgggtgaaactaaccgcggcgcaaaggcgatacaaggccgac
ttcgataagaaggtgcgtttccgtccggtcatcgagaagggagaccgggtctatgtcgac
cgcccacctcggccattgacgagtaccgaacggggagacctgccaagcaatgacggggga
ccctctgtcaagcttttaccgaaaacggaaggcccgtttccggtccgatccgctacggag
accacagtggtcgtcgatcaagacggggtttcaaaccgcgtgagcatcgaccggataacc
cggatgccgcggggaccccgcgacgtcactgcggccgccgcgacccagcccgcggcgggc
ggagaacccgaacccgccgcggagtatgtgattgaccatctggtcggtcaccgagagaac
cgcacaggaacccagtacaaggtccgctggtatggctacgccccagcggacgatacctgg
gaacccgcggagggactcccccaggccttcatagaccgcttctggcgcacgcgggcggca
acacgccaccactaa
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