Chondrus crispus (carragheen): CHC_T00001058001
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Entry
CHC_T00001058001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K01974
RNA 3'-terminal phosphate cyclase (ATP) [EC:
6.5.1.4
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CHC_T00001058001
Enzymes [BR:
ccp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.4 RNA 3'-terminal-phosphate cyclase (ATP)
CHC_T00001058001
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Paralog
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Motif
Pfam:
RTC
RTC_insert
Ribosomal_L39
Motif
Other DBs
NCBI-GeneID:
17326293
NCBI-ProteinID:
XP_005718576
UniProt:
R7QMG6
LinkDB
All DBs
AA seq
439 aa
AA seq
DB search
MTCVENTYVQLITPPSTPSQRSKTPPASHPTTPFLPPHSLVFASPCPTPMSSPSRKRHKT
MSSSASEPIPSEPVPSYVVPDLVIDGSSGEGGGQVLRLSLSLAAILSRHVRVTDIRGNRL
VPGLQAQHVAAVNLVADVSNASLVDACEGSQAIELLTPRPRTDPAHLPFLAAVSTAGATA
LVLQAALPPALKFLPGGSTVAMRLTGGTTAMYAPPSDYVQKVLVPNLRLFGVDLRFDVVK
HGFFPRGGGQIDVSFDKKGCQAVEGKDAVCVLNPIELTEKGTLLSIEGELVVSGYDYVVS
GVVEEMALAAVKEITSQLGYVKVTAPFRRRHITIKEVSKTSTSGKCLCLTLFARFSNGSV
MGSNVLWSEQQAAQRKDWAMLKKSRRMTYKDKLRFWRESVSSAATEAAKRLCDTIGTEAA
VDEYMADQLVDPAGNEIGQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgtagagaatacatacgtacagttaatcacgccaccgtcgacaccgtcccaa
cgcagcaagacaccacccgcatctcacccaaccaccccttttctaccccctcattccctc
gtcttcgcttctccttgccccacacctatgtcctctccctctcgcaagcgccacaaaaca
atgtcctcctccgcctccgaacccatcccgtccgaacccgtcccctcgtatgtcgtcccc
gaccttgtaatcgacggttcaagcggcgaaggcggcggccaggtgctacgtctatctctc
tccctcgcagcaatcctctcccgccacgtccgagtcacggacattcgcggcaaccgcctc
gtccccggtctgcaggcccagcacgtggccgccgtcaacctcgtcgccgacgtctccaac
gcctccctggttgacgcttgcgaaggctcccaggcaatcgaactcctcacgccacgccca
cgcactgatcctgcacacctccccttcctcgctgccgtgtccacggcgggcgccacagcc
ctcgttttgcaggctgccctcccgcccgcgctaaagtttctgcccggaggaagtactgtc
gccatgagattgacaggcggcaccacggccatgtatgccccgcctagcgattacgtgcag
aaagtcctcgtgcccaacttgaggttgtttggagttgatctgagattcgacgtagtgaag
cacggattttttcctaggggaggtggacagattgatgtctcgtttgataagaaggggtgc
caggctgtcgaggggaaggatgcggtgtgcgtgctgaatccgattgagttgacggaaaag
gggactctgctttccattgagggggagctagtcgtgtcggggtatgattatgtcgtgagt
ggcgttgtcgaagaaatggccttagcggccgtgaaggaaatcacgtcacagcttggatat
gttaaagttaccgccccgtttaggcgcaggcatattactatcaaagaggtcagcaagacg
agcacgtcgggcaaatgtctgtgcttgacgttatttgcccggttttcaaacggctccgtt
atggggtccaacgtcttgtggtcggaacagcaagcggctcagcgcaaggattgggcaatg
ctgaagaaatcgcgcagaatgacttataaagacaagctcaggttttggagagagtccgtg
tcgagtgcggctactgaagccgccaaaaggctttgcgatacgattggtacggaggcagct
gtagatgagtatatggctgaccagctggtcgatccagctggaaacgagattggacaatga
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