Chondrus crispus (carragheen): CHC_T00001067001
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Entry
CHC_T00001067001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00906
Carotenoid biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CHC_T00001067001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
CHC_T00001067001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NnrU
PEMT
ICMT
Motif
Other DBs
NCBI-GeneID:
17326302
NCBI-ProteinID:
XP_005718588
UniProt:
R7QLM5
LinkDB
All DBs
AA seq
344 aa
AA seq
DB search
MAIPIPAFSVLSPALPRAISIQTLTTTRPPRLCRRRRRRRVPSLSAQTPAPSSDPATPPP
PTPATPPSQPPLPPPSRLALSSAAFLSLSALAVPPLLTLRDAPADFLPHLLSHYPSHLLI
ILFTALFALLHSGLASLRPSLTPVLGERLYRVGFALVSLPSATALIAYFIAHRYDGAQLW
RVQNLPGLHDAVYIATFVSFLLLYPATFNLLEVAAVQKPTLRIYETGVTRITRHPQLWGQ
ILWCVAHTAWMGTSFTLVASLCLVAHHSFGAWNGDRRLRDRFGEEWIAFAQRTSIVPFAA
VVSGKQNLAWGEFFRPAYVGVVAFVLATYAAHPLMLRAVGDLHL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccccatcccggccttctccgtgctttcccccgcgttgccccgcgccatctcc
atccagaccctcaccaccacgcgcccgccccgcctctgccgccgccgccgccgccgccgc
gtcccctctctctccgcgcaaacgcctgctccctcgtccgaccccgccacccctcccccg
cccacccccgcgacccccccttcgcagccgccgctgccgccgccctcccgcctggccctc
tcctctgccgccttcctttccctatccgcgctcgccgtcccgccgctcctgacgctgcgc
gacgcccctgccgacttcctgccgcacctgctctcgcattacccctcgcacctgctgatc
atcctctttaccgctctcttcgccctgctgcactccggcctggcctcgctccgcccttcc
ctcacgccagtgctaggcgagcgtctgtaccgcgtcggctttgcgctggtctcgctcccg
tcggcgacggcgctcatcgcctacttcatcgcgcaccgctacgacggcgcccagctgtgg
cgcgtgcagaacctcccgggattgcacgacgccgtgtacatagcgaccttcgtctcgttc
ctgctgctgtaccccgccacgttcaacctgctcgaagtcgccgccgtgcagaagccgacc
ctgcgcatatacgaaacgggcgtcacgaggatcaccaggcacccgcagctgtgggggcag
attctgtggtgcgtcgcgcacacggcctggatggggactagcttcacgctcgtcgcgagc
ctttgcctggtcgcgcaccactcgttcggcgcgtggaatggcgatagaagactcagagac
cgcttcggggaggagtggattgcattcgcgcagaggacgagcatcgtcccgttcgccgct
gtcgtctcggggaagcagaacctcgcctggggagagttctttagaccagcgtatgtaggg
gttgtcgcatttgtgctggcgacgtatgcggcccatccgcttatgttgagagcggtaggg
gacctgcatttgtag
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