Chondrus crispus (carragheen): CHC_T00003110001
Help
Entry
CHC_T00003110001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRK
Motif
Other DBs
NCBI-GeneID:
17321952
NCBI-ProteinID:
XP_005714228
UniProt:
R7Q8P9
LinkDB
All DBs
AA seq
1181 aa
AA seq
DB search
MSFRPITVQPFPVRTQHSSEIRFKIDMASNRRLRVFRLHQALFCTGFPSRESEAKNKASM
LLFSSDNISTHVKTTTEDATARPTEEERKAAAKPSMPGDVSGSIGRVIPRQKPEALPRIS
QSSAHKIRRTEPKLCSSEVYATSLKGQVVTVSPATGKGKENVVGHLSKSRPASTTNLFNV
KHQRASTIAQRDRPDVSSTPGNMTTTKGTIPVPAKAIVNGPRPRRPADSSQLTRLDRSRE
KSLPALVPKAASRNRSVQQCRPRGQFPVTRRAGSKRVLPQCCIDAQLRAAKIARVSSEAR
ARRTVAASQRLKTVDARGKYQQKERAVSNQTKERKCVPLSSKATSQIAVSKSSSSLRNSP
APKQPATKERSLVASPHRPDVPKLLGPKWDSRAKGSGSHSPGASSALPEKAQDGTTGKLS
RTSSKTPRVDGVRKAQAQTKTQVPTRASTSPQPRISPRESFIGRHSGTGAAQAGKRTFVN
KETQPRAQSLRQNLMSRSHEALSTKAQAGASASENHSTTSPDVKRMVGIATQKSGTSSGK
QQSRGHITSISSGLPCRSLKQEPHAVGIGTNASSKVDRSSSTTANATRRAGHVVVRNEPT
HTDSAKSSVNSKSACLQLLTTSGSSANGKVSQEILRRGSVDLHGKSQNDRNGDIREKRKS
SAGTSAKPKLLPLEGKATAVSPLPSSVKELSSGRRVALPSPSMTVSGKNKPGASSSVYAQ
RAARPTPYSCPTCAACAHMRTNLSRPIARRVRVDSTQKGVSTKAKADNNVALRGVQRTPA
VPIGALAAAARAAAAVEPTPPLQPRSTPGSSKQSCDERALGSTSAAIKPKPFPTAIGAPV
TKKLPPSLPVVAKAVPVSSAAPSKSVTGEIRPATSDGGSKRPSPEKLVQKPPSARQLAPS
VKEGTPSSALTFPDDTHVTMWNRVEQRKIAGNAAPLGKNLDRYLQGHPECEIYDRQDQDL
MRTPLKRGDRKKRRVNPDELGAGVHVAIWNRTTNRKVAGNAAPLNKNLKAYLAKRPYCEV
YNGQDDEPEKASVAKGEKKQGRGEVKREPELEHPALSSVIAGSVIVQSPAEAGLDSWRNL
SAEYEALGHSYKTDFDEADEWIRWGGCEDDDVSPMIVESYVGDDMSGTIVDVQDVTPLEL
VGSDDAFRYFDANMFSSDNFEHSLEVESQALSIGNRAEKQV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaggcctattacggtccaaccttttccagttaggacacagcattcatccgaa
attcgtttcaagatcgacatggcgagcaaccgccgactgcgagtgttccgtttacaccag
gccctattttgtactggattcccgtcgagggagagcgaggccaagaacaaagcttcgatg
ctcttattttcctctgacaacatttcgacgcacgtgaaaacgacaactgaagatgcaaca
gcaaggcccacagaggaagaacgaaaagcggcggcgaaaccctcaatgccgggagatgtc
tctggcagtattggtcgggtcattccccgtcaaaaacccgaagccttgcctcggatttcg
caatcgtctgcacataaaatccgtcggaccgaacccaagctttgtagctctgaagtttac
gctaccagtctgaaagggcaggtcgtgacggtttcacctgctacaggcaagggcaaggag
aatgtcgtaggccacctaagcaagtctcgtccggcatctaccaccaatcttttcaatgtt
aaacaccagagggcaagcacgattgctcagagagatcgtcccgatgtgtcttcaacaccg
ggaaacatgactaccacgaaagggacgattccagtgccggcgaaagcaatcgtaaatgga
ccacggccgcggcgcccggcggactcatcgcaactcacacggctcgaccgttcacgagaa
aaatcactaccggctcttgtgcccaaagctgcttcgaggaaccgaagcgttcagcagtgc
cgtcctcgcggccaattccccgttacaaggcgggcaggttcaaagcgtgtccttcctcag
tgctgcattgatgcacagcttcgagctgcaaaaatcgctcgcgtttctagcgaagcgaga
gcgcgtcgtacagtagcggcatcacagcgtctcaaaacagtggacgctcgggggaagtat
caacaaaaggaaagggcagtatctaatcagacgaaggaaaggaagtgcgttccgctatcc
tcgaaggcaacttcgcagatcgcagtatcgaaatccagcagcagtttgcggaattctccg
gctccgaagcaacccgccacgaaagaacggagtttggtggcaagtccacaccgaccggac
gttcccaagctgctaggcccaaagtgggattctcgtgcaaagggttcgggaagtcattca
cctggggctagctctgcattaccagaaaaggcgcaagatggtactacgggcaagttgtct
cggacttcgtctaagacaccccgcgttgacggtgttcggaaagctcaagcacagaccaag
acacaggttccaactagagcgtcaacctcaccgcagcctcggattagtcccagagaatca
tttattggaagacactctggcacaggagctgcgcaagctggaaagcgcacgtttgtgaat
aaagagacgcagccgagagcacaaagccttcgccagaacttgatgtcccgttcacatgaa
gctctttccaccaaagcacaggccggagcgtctgcatccgagaatcatagcaccacctcg
cctgacgtgaagaggatggttggtattgcgacccaaaagagcggaacgtcatcgggaaag
cagcaatcgcgtgggcacatcacaagtatctcgtctggcctgccatgtcggagcttgaag
caagagccccatgcggttggcattgggacaaacgcctcatcaaaagttgatcgctcctcg
tccacgacagctaatgcgacaaggcgtgcgggacatgttgtggtgagaaacgaaccgacg
cacaccgatagtgccaaaagttctgtcaattccaagtcggcatgtttgcaattgctcacc
acaagcggttctagcgcgaatggcaaagtcagccaggagattttgcgacgaggaagtgtc
gatttgcacggtaaatcgcaaaacgatcgaaacggtgatattagggagaagagaaaaagc
tccgcaggcacttctgcgaagccgaaacttttgcccttggaaggaaaggcaaccgctgta
tcgcctttgcctagttcagtcaaggaattgtccagcggacgaagagtagctctcccgtct
ccgagcatgactgtgagtgggaagaacaaaccaggtgctagttcgtcagtttatgcccag
agggcggcaagaccaacgccatattcttgcccgacatgcgcggcttgcgcacacatgcgg
acaaatctatctcgcccaattgcccgacgagtccgcgtagacagtacccaaaagggtgtg
tccaccaaagccaaagccgataacaacgttgctttacgaggtgttcaaagaacaccggct
gtacctattggcgctcttgcggctgctgcgcgtgcagctgctgcagttgagccgacacct
ccgctacaacctcgaagtacgcctggctcttcgaagcagtcatgcgacgaacgagcattg
ggaagtacttccgctgctataaaacctaagccgttccctacagcaatcggcgcccctgtc
acgaagaaattaccgccctctttacctgtcgttgcgaaagcggtgccggtgtcctccgca
gcacccagcaagtccgtgacgggggaaattcgccctgctacctccgacggtggttctaag
cgaccctcaccggaaaaacttgtacaaaagcctccatccgcccgtcagcttgctccttcc
gtgaaggaaggaacccccagctcagcactgacgttcccggatgacactcacgttactatg
tggaaccgagtggaacagagaaaaattgctggaaacgcggcaccgctcgggaagaatcta
gaccgttatttacaagggcaccctgagtgtgagatatacgacagacaagatcaagattta
atgcgaacgcctctgaaaagaggggatcgcaagaagaggagggtcaatccagacgagcta
ggggcgggtgtccacgttgcaatatggaatcggaccacgaataggaaagtggctggcaac
gctgcgccattgaacaagaatttgaaggcatatctcgcgaagcggccatattgtgaggta
tacaacgggcaagacgacgagccagaaaaagcatctgtggcgaaaggagaaaagaagcaa
ggaaggggagaggtcaaacgtgaaccagagctcgaacacccggccctctctagtgtgatt
gcaggatcagtaattgtgcagtcgccggcagaggcagggttagactcgtggagaaatctg
tctgcagagtacgaagcgctggggcattcttacaaaactgattttgacgaagcagatgag
tggatacgttggggcggatgcgaggatgatgatgtcagtcctatgattgtggagagctat
gttggcgacgacatgtcgggaacgatcgttgatgtacaagatgttacaccgctggaactt
gtcggttcagatgatgcgtttaggtattttgacgcaaacatgttttcctccgacaatttc
gagcactccttggaggtcgagtcccaggcgctaagtatagggaatagagctgaaaagcag
gtttag
DBGET
integrated database retrieval system
