Chondrus crispus (carragheen): CHC_T00005551001 Help Entry CHC_T00005551001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K14317   nuclear pore complex protein Nup214 Organism ccp  Chondrus crispus (carragheen) Pathway ccp03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     CHC_T00005551001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccp03019]     CHC_T00005551001 Messenger RNA biogenesis [BR:ccp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      CHC_T00005551001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ANAPC4_WD40 HA2_N NUP214 Motif Other DBs NCBI-GeneID:  17324418 NCBI-ProteinID:  XP_005716712 UniProt:  R7QGK8 LinkDB All DBs AA seq 1649 aa AA seqDB search MESLGEPREFFAEFFRCVERQHNPGPATSADFPPANHGNLLASSSRHGYLLVASNREIYI HLLQGLRNKAPGDFPEGRLDLGKHGVKTILDITFVLNDAALVVRAVPEREEDACVLVLST EMLVKGRAALFNGPPLQRGLNAVAVCPQSFKTESPGEELNQFVALLYGETKVELHAIGTG MADDGTATSAQCSFDAPGPVTSLALSPEDRLLAVGAMRGSVGIHDPKSGARLHNITEIES GWSPFSLHFLDDEALMVSYVRGQDVSHVVWNLVKNGDSLTVKGHSVLGELCLPLLGTFPS SSDGEDGDDENESKPPVIWCHRIPGWDICIVASSKSESMELIALNENGVWVNWKPDEGKM ATLPTDENDDDTFPIGIALDLTDTDPVDAIEPALPPLKPMPRVIAFTSVVLLLPFSLVDD RADAGCRFIAERRRIQKTPAEPKPMEKLVFPEVLSAAESSSQEDDHEVPSLPLQEQMAQK PLVEQPFLHGPPVQMPALPTPTTKTTSDFSASSLESEHMLLSGEVTPKDGFHSTLRPPFG VPASISAPETSQDVRDGKSDSSASSVLKNLAFPSFSASVLKRDVPIVVPEQLKPTHVGQI SFPVGEPGDYASSIRMVLDEMRTELNMNRIMEESTQKTLFKTNEQMMPHIETVRSELAGL LDVLRKRFHEEASLRREVLTSLKGMNALSREYESAYLEFRVREEEGFVSHLQAEDKIMDD SIVKKEADILKSISAIERKLSTSQNRKPSRLGHAEQVQQIYSSLSLQGIRVKKLRGLLAA LSDRIDELDRGGRLTDLGLSMARLEKLSINRIKSPTMNLRQGSRGLRSAERGPGEEFVPK VSSMLPTHPYNSEESLLPGDVQKVLRRLAMRDGRAVIVVQGPQGERRRAEEMSEGKNRFA PDQAEQSLRPGAFYASIASSNGHGQQNIDMIRNRRSETIHSVKNNQTPSFAPLSYQRGER KESSSAGNRVVPSGKRSASASRDPAGTVKEGVGHERGEIPSLASSGNILSNLPEDGQAGA EEAGSKRAFYPPSTSNHFTAREITSKPMTKPNVPSAGIPRIRVPAVAADLFGTSDSVPPV VASSGQPLNAGESPLSFKPVTSGRRQSTKKPPILPHETDTFASLPPEPHGVQRKRSLQQE DSQSAGARAAGTIPVAFLPPDPDSPITSSANPLSNGTKKGSVAQEQSPKASDSPFATLPP EDDRKEVPFASLPPDDDLTIDFSAVVPAGSVPKQKQRENPIPREEVTSSTFTALPPDDDV KPNPVTSKNLSIGPTTGTIGTQLAMTAQSSPPIFGIDSGESNAFGVFGNKLAPEGKPTTS LFGAAQASESKSKSKEESGSASLFATATQSTALQFSNSFSAAFSTQPAEPATSQDDAPAN ESLPPIDADSSDSDGEENFRREGGFGAMSASKFNAPREQTFQGFGKQAAFGQASASPFAT AGTQSGQTSAFSSLTQQHTGPSTSAFTSDASGQTSGFGAPSTLGGGASFGFGSQLGASTQ PGAVPQFGQSSQLGGAVQFGANSQLGAGFGAQSSLGGGQSPFSAQPTPAPSGFGSGGPPF GSEMSNVRFGESTFGAPQSGFPGGGASPFAGSGAAFGGQSGGISGFAALAASQPPGGGGS GFGNGMTPIFGNSQGPPSFTSPAFSQRRA NT seq 4950 nt NT seq  +upstreamnt  +downstreamnt atggagagcctgggcgaaccgcgggagttcttcgccgagttcttccgatgtgttgagagg cagcacaacccaggcccggcgacatccgccgacttcccgcccgccaaccacggtaacctg ctcgcctcctcatcgcgccacggctacctcctagtcgcttccaaccgtgagatatacatc catctgctccaagggctccgcaacaaggcccccggcgacttcccggagggccgcctcgat ctcggaaagcatggcgtaaaaaccattctggacatcactttcgtgctcaatgacgccgcc cttgtagtgcgcgcggtcccggaaagggaggaagacgcatgcgtcctcgtccttagcact gagatgctcgtaaaaggaagggccgccctgttcaacgggccgccgctgcaaagggggctc aacgccgtggccgtgtgtccgcagtccttcaaaacggagtctccgggcgaggaattgaac caatttgtggccctgttgtatggcgagaccaaggtcgagctacatgctattggcacgggg atggccgacgacggcacggcgactagtgcccagtgctcgttcgacgcgccagggccagtc acctcgctagctttgtccccggaagatcgactgctcgccgtaggagcaatgcgcggctcg gtgggcattcatgatccgaagagcggtgcacggcttcataatatcacggaaattgagtcg gggtggagcccgttttcgctccactttctggacgatgaggctctgatggtttcgtatgtg cgcggtcaggatgtaagtcatgtggtctggaaccttgtcaaaaacggagattcgctgacc gtgaaaggacattcggtcctcggcgagttatgtttgccgcttcttggcacgttcccttct tcttctgacggagaggatggagatgatgagaatgagagtaaaccgccagtgatttggtgc caccgcatccccggatgggatatttgcatcgtcgcgtcgtcaaagtccgaaagcatggag ctcatcgctttgaatgagaatggtgtttgggtgaactggaagccagacgaaggtaaaatg gctactttgcctacggatgaaaacgatgacgatacgtttccaatcggtatcgcgcttgat ctcacagatacagatcctgtcgacgccatagaaccggcacttcccccgctgaaacctatg ccacgcgttattgcgttcacgtctgtcgtactcctgctgcccttttccctcgttgacgat cgagctgatgctggctgtagatttattgccgagcggcgacgcattcagaagacacctgca gagcccaaacctatggaaaagctcgtcttcccggaagtactttctgctgctgaatcttca agtcaagaagacgatcatgaagtaccttctcttccgcttcaagagcaaatggctcaaaag cctttggttgaacagcctttccttcatgggcctccagtccaaatgccagcactcccaacg cctacaacgaaaacgacgtccgatttttcagcttcttcacttgaaagcgaacacatgctg ctgtctggagaggtcacacccaaggatggcttccattcgacgctgaggcctccgtttggg gttccggcatctatttctgcaccggaaacttcgcaggacgtcagagatggaaagtctgac tcaagtgcaagctcggttttaaagaatcttgctttcccctcattttcggcgagtgttttg aaaagggatgttccgattgttgtaccagaacagctcaagccgacccatgttggccagata tcatttccggtaggagaacctggggactatgcatcctcaatcaggatggtattggacgag atgagaacagaactaaacatgaaccgaattatggaagagtcaacacaaaagacgcttttc aaaacaaatgaacaaatgatgccgcacattgaaactgtcagatctgaactggcaggactg ttggatgtactacggaaacgattccatgaagaagcttcactccggcgggaagtgctgacc tcgttaaaaggtatgaatgccttatctcgggaatatgagtcggcatatcttgaattcaga gttcgtgaagaagaaggttttgtgtctcatttgcaagccgaggacaagatcatggatgat agcattgtaaagaaagaggcggatattcttaaatccatatctgccattgaacggaaattg agcacttcacagaatcggaaacccagtcgactgggtcatgcagagcaggtccaacaaatt tattcctccctaagcctacaggggatccgcgtcaagaagcttcgtggtctcctggccgct ctttcagatcgcatagatgaattggacagaggagggaggctcacagatctgggtctgtca atggctcgccttgagaagttatcaattaaccgcatcaagtcaccaactatgaaccttcga caaggtagtcgtggtctccgaagtgctgaacgagggcccggcgaagagtttgtaccgaaa gtgtcttccatgctcccaacacacccgtacaactctgaggaatcactacttccgggagat gtacaaaaggtattgcggcgtttggccatgagggatgggcgcgctgtcattgttgttcaa ggtccacaaggagagaggcgcagagctgaagagatgtccgaaggtaagaatcgttttgca ccggaccaagctgaacagagccttcgccctggggctttttacgcctccatcgccagctct aatggccacgggcagcagaacattgacatgattcgcaacagaaggagcgaaactattcac agtgtgaagaacaaccagactccatctttcgctccactgtcctatcagcgaggagaaagg aaagaatcgtcaagtgctggcaatcgcgtagtaccttcaggaaagcggtctgcgtcagcg tctagagatccagctgggactgtcaaggagggagtaggacatgagcggggggaaattccc agccttgcatcaagtggaaacattttatcaaacctaccggaggatgggcaagcaggagct gaagaagcggggagcaagcgggcgttctacccgccatccacatcaaatcacttcacggca cgagagatcacatcaaaacctatgaccaaaccaaacgttccttctgctgggataccaaga attagagtccctgcagttgcagcagatctgtttggaacctctgattcggttccaccagtc gtcgcgtcttctggccagccactaaacgcgggggagtcacccctctctttcaagccggtg acatctggacgccgacagagcactaaaaagcctcccatcttgccacatgaaacagacaca tttgcctctctcccgcccgagccacatggagtgcaacgtaagaggtctttgcaacaagaa gattctcaaagtgctggagctcgagccgcaggtacaattccggtggcctttttaccgccg gatccagactcccctattaccagctctgcaaacccactatcaaacggaacgaagaagggt tccgtagcacaggagcaatcaccaaaggcttccgactctccctttgccacattgccgccg gaagatgaccgaaaagaggttccgttcgcctctcttccaccagatgatgatttgacaata gacttttcagctgtggtgcccgccggttctgtcccgaagcaaaagcaacgagaaaatcca attcctcgagaagaggtgacaagttccacttttacggctctaccgcctgacgacgatgtc aagcccaaccctgtgacgtcgaagaatctgtccattggacctactacgggaacgatagga acccagttggccatgacagctcagagcagtcctcccatcttcggaattgatagtggcgaa tcaaacgcattcggtgtcttcgggaacaaactggctcctgagggtaaaccaaccacttcc ttatttggtgccgctcaggcttctgaaagcaagtcgaagtcaaaagaagagtcaggaagt gcgtctctgtttgccacagcaacacagagcacggcattgcagttctcgaattccttttcg gcagcattttcgactcaaccggctgaacctgcgacatctcaagacgacgcgcctgctaac gagtctctcccgcccattgatgcagatagctcggactcggatggggaggaaaatttcagg cgtgagggcgggtttggggcaatgtcggcttcgaaattcaacgcccctagggagcagacc ttccaaggatttggtaagcaggctgcatttgggcaggccagtgcaagtcctttcgcaacg gcagggacacaaagcggacagactagtgctttctcatcgctcactcagcaacatacgggc cctagtacttcggctttcacgtcagatgcttctggacaaacctccggatttggagctcct tctacgctaggcggaggggcatcttttggatttgggtcgcagcttggagcctcgacgcaa ccaggggccgtaccacaattcgggcaaagttcacagcttggtggtgcagtgcaatttgga gcgaattcgcagcttggggctggatttggggcacagtcttcgcttggtggaggtcagtct ccgttttcagcgcaaccgaccccggcgccctccggatttggaagcggagggccccctttt gggagtgaaatgtctaacgtaaggtttggagaatctacttttggagcgccacaatctgga tttcccggtgggggtgcttctccttttgctggtagtggtgctgctttcgggggccagagc ggtggaatttctggttttgcagccttggcagcctcacagcccccaggtggtggagggtcg gggtttggcaacggcatgaccccaatatttgggaacagccagggcccaccatccttcaca tcgcccgctttctcacagagaagagcatga

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